RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 NUPR2A6NF83 97 aa8.98□□□□□ -0.97
SSSCA1-203ENST00000526877 NCR2O95944 276 aa8.98□□□□□ -0.97
SSSCA1-203ENST00000526877 IGHV3-53P01767 116 aa8.98□□□□□ -0.97
SSSCA1-203ENST00000526877 OR10J3Q5JRS4 329 aa8.98□□□□□ -0.97
SSSCA1-203ENST00000526877 SUMO4Q6EEV6 95 aa8.98□□□□□ -0.97
SSSCA1-203ENST00000526877 ZNF479Q96JC4 524 aa8.98□□□□□ -0.97
SSSCA1-203ENST00000526877 TRGV4A0A0C4DH28 118 aa8.97□□□□□ -0.97
SSSCA1-203ENST00000526877 S100A6P06703 90 aa8.97□□□□□ -0.97
SSSCA1-203ENST00000526877 LINC00476Q8WZB0 136 aa8.97□□□□□ -0.97
SSSCA1-203ENST00000526877 ALMS1Q8TCU4 4167 aa8.96□□□□□ -0.98
SSSCA1-203ENST00000526877 TNFRSF6BO95407 300 aa8.96□□□□□ -0.98
SSSCA1-203ENST00000526877 Q0VG73 95 aa8.96□□□□□ -0.98
SSSCA1-203ENST00000526877 BAGE3Q86Y29 109 aa8.96□□□□□ -0.98
SSSCA1-203ENST00000526877 PHLDA1Q8WV24 401 aaPredicted RBP8.96□□□□□ -0.98
SSSCA1-203ENST00000526877 MAP1LC3AQ9H492 121 aa8.96□□□□□ -0.98
SSSCA1-203ENST00000526877 CELA1Q9UNI1 258 aa8.96□□□□□ -0.98
SSSCA1-203ENST00000526877 M0QY20 66 aa8.95□□□□□ -0.98
SSSCA1-203ENST00000526877 NPYP01303 97 aa8.95□□□□□ -0.98
SSSCA1-203ENST00000526877 GATA1P15976 413 aaPredicted RBP8.95□□□□□ -0.98
SSSCA1-203ENST00000526877 NDUFA6P56556 154 aa8.95□□□□□ -0.98
SSSCA1-203ENST00000526877 NANOS2P60321 138 aaKnown RBP8.95□□□□□ -0.98
SSSCA1-203ENST00000526877 NRACQ8N912 160 aa8.95□□□□□ -0.98
SSSCA1-203ENST00000526877 C11orf45Q8TAV5 145 aa8.95□□□□□ -0.98
SSSCA1-203ENST00000526877 C18orf32Q8TCD1 76 aa8.95□□□□□ -0.98
SSSCA1-203ENST00000526877 C20orf78Q9BR46 151 aa8.95□□□□□ -0.98
SSSCA1-203ENST00000526877 NIT2Q9NQR4 276 aa8.95□□□□□ -0.98
SSSCA1-203ENST00000526877 GAS8-AS1O95177 125 aa8.94□□□□□ -0.98
SSSCA1-203ENST00000526877 ATP5G1P05496 136 aa8.94□□□□□ -0.98
SSSCA1-203ENST00000526877 FHL2Q14192 279 aa8.94□□□□□ -0.98
SSSCA1-203ENST00000526877 Q6ZSN1 163 aa8.94□□□□□ -0.98
SSSCA1-203ENST00000526877 PRSS3P2Q8NHM4 247 aa8.94□□□□□ -0.98
SSSCA1-203ENST00000526877 RPL39LQ96EH5 51 aaKnown RBP8.94□□□□□ -0.98
SSSCA1-203ENST00000526877 DNAJC30Q96LL9 226 aa8.94□□□□□ -0.98
SSSCA1-203ENST00000526877 ST20Q9HBF5 79 aa8.94□□□□□ -0.98
SSSCA1-203ENST00000526877 KLK5Q9Y337 293 aaPredicted RBP8.94□□□□□ -0.98
SSSCA1-203ENST00000526877 TRBV10-1A0A0K0K1A3 114 aa8.93□□□□□ -0.98
SSSCA1-203ENST00000526877 LOC389332A0A1B0GUA5 103 aa8.93□□□□□ -0.98
SSSCA1-203ENST00000526877 TRBV6-4A0A1B0GX49 114 aa8.93□□□□□ -0.98
SSSCA1-203ENST00000526877 K7EQD1 137 aa8.93□□□□□ -0.98
SSSCA1-203ENST00000526877 LY6G6CO95867 125 aa8.93□□□□□ -0.98
SSSCA1-203ENST00000526877 SUMO2P61956 95 aaKnown RBP8.93□□□□□ -0.98
SSSCA1-203ENST00000526877 IQCJQ1A5X6 159 aa8.93□□□□□ -0.98
SSSCA1-203ENST00000526877 TNFRSF18Q9Y5U5 241 aa8.93□□□□□ -0.98
SSSCA1-203ENST00000526877 BIRC6Q9NR09 4857 aa8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 TRBV6-5A0A0K0K1A5 114 aa8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 PRSS47A8MTI9 375 aa8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 PMCHP20382 165 aa8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 RHOHQ15669 191 aa8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 C12orf74Q32Q52 190 aa8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 FA2HQ7L5A8 372 aa8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 NIT1Q86X76 327 aa8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 SLC25A29Q8N8R3 303 aa8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 PRADC1Q9BSG0 188 aa8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 NXT2Q9NPJ8 142 aaKnown RBP8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 HHLA3Q9XRX5 114 aa8.92□□□□□ -0.98
SSSCA1-203ENST00000526877 LINC00614P0C842 121 aa8.91□□□□□ -0.98
SSSCA1-203ENST00000526877 RPL36AP83881 106 aaKnown RBP8.91□□□□□ -0.98
SSSCA1-203ENST00000526877 COA6Q5JTJ3 125 aaKnown RBP8.91□□□□□ -0.98
SSSCA1-203ENST00000526877 RPL36ALQ969Q0 106 aaKnown RBP8.91□□□□□ -0.98
SSSCA1-203ENST00000526877 PRO0255Q9UI72 69 aa8.91□□□□□ -0.98
SSSCA1-203ENST00000526877 SDHAF1A6NFY7 115 aa8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 F5H768 121 aa8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 VCYO14598 125 aa8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 P0DMU3 169 aa8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 FAM231AP0DMU4 169 aa8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 FAM231CP0DMU5 169 aa8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 HTN3P15516 51 aa8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 HOXA5P20719 270 aa8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 IFI27P40305 119 aaPredicted RBP8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 RPL32P62910 135 aaKnown RBP8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 RNASEKQ6P5S7 137 aaKnown RBP8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 Q8N8P6 123 aa8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 NEXN-AS1Q8NBZ9 246 aa8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 CHCHD1Q96BP2 118 aaKnown RBP8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 SMIM2Q9BVW6 85 aa8.9□□□□□ -0.98
SSSCA1-203ENST00000526877 PAX4O43316 350 aa8.89□□□□□ -0.99
SSSCA1-203ENST00000526877 SERF1AO75920 110 aa8.89□□□□□ -0.99
SSSCA1-203ENST00000526877 CRYBA4P53673 196 aa8.89□□□□□ -0.99
SSSCA1-203ENST00000526877 POLR2KP53803 58 aaKnown RBP8.89□□□□□ -0.99
SSSCA1-203ENST00000526877 SNRPEP62304 92 aaKnown RBP8.89□□□□□ -0.99
SSSCA1-203ENST00000526877 LGALS9CQ6DKI2 356 aa8.89□□□□□ -0.99
SSSCA1-203ENST00000526877 ZNRF2Q8NHG8 242 aa8.89□□□□□ -0.99
SSSCA1-203ENST00000526877 TMEM70Q9BUB7 260 aa8.89□□□□□ -0.99
SSSCA1-203ENST00000526877 TRBV7-3A0A075B6L6 115 aa8.88□□□□□ -0.99
SSSCA1-203ENST00000526877 C5orf52A6NGY3 159 aa8.88□□□□□ -0.99
SSSCA1-203ENST00000526877 TCAPO15273 167 aa8.88□□□□□ -0.99
SSSCA1-203ENST00000526877 HSBP1O75506 76 aa8.88□□□□□ -0.99
SSSCA1-203ENST00000526877 Q6ZTC4 211 aa8.88□□□□□ -0.99
SSSCA1-203ENST00000526877 KIR2DL4Q99706 377 aa8.88□□□□□ -0.99
SSSCA1-203ENST00000526877 AP5S1Q9NUS5 200 aa8.88□□□□□ -0.99
SSSCA1-203ENST00000526877 APLNQ9ULZ1 77 aa8.88□□□□□ -0.99
SSSCA1-203ENST00000526877 IGLV2-18A0A075B6J9 118 aa8.87□□□□□ -0.99
SSSCA1-203ENST00000526877 TRBV27A0A0K0K1C4 114 aa8.87□□□□□ -0.99
SSSCA1-203ENST00000526877 GAGE12JA6NER3 117 aa8.87□□□□□ -0.99
SSSCA1-203ENST00000526877 I3L3M4 83 aa8.87□□□□□ -0.99
SSSCA1-203ENST00000526877 K7EMI3 77 aa8.87□□□□□ -0.99
SSSCA1-203ENST00000526877 ESDP10768 282 aa8.87□□□□□ -0.99
SSSCA1-203ENST00000526877 GAGE1Q13065 139 aa8.87□□□□□ -0.99
SSSCA1-203ENST00000526877 GAGE4Q13068 117 aa8.87□□□□□ -0.99
SSSCA1-203ENST00000526877 GAGE5Q13069 117 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms