RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 URB1-AS1Q96HZ7 61 aa10.16□□□□□ -0.78
COLCA2-202ENST00000526216 ZMAT4Q9H898 229 aa10.15□□□□□ -0.78
COLCA2-202ENST00000526216 Q0VG73 95 aa10.14□□□□□ -0.79
COLCA2-202ENST00000526216 DYNC2H1Q8NCM8 4307 aaKnown RBP10.14□□□□□ -0.79
COLCA2-202ENST00000526216 NUPR1O60356 82 aa10.13□□□□□ -0.79
COLCA2-202ENST00000526216 OR10J3Q5JRS4 329 aa10.13□□□□□ -0.79
COLCA2-202ENST00000526216 SLC25A29Q8N8R3 303 aa10.13□□□□□ -0.79
COLCA2-202ENST00000526216 IGLV2-18A0A075B6J9 118 aa10.12□□□□□ -0.79
COLCA2-202ENST00000526216 TRGV4A0A0C4DH28 118 aa10.12□□□□□ -0.79
COLCA2-202ENST00000526216 TRBV6-5A0A0K0K1A5 114 aa10.12□□□□□ -0.79
COLCA2-202ENST00000526216 LOC100131303A0A0U1RQF7 123 aa10.12□□□□□ -0.79
COLCA2-202ENST00000526216 LOC389332A0A1B0GUA5 103 aa10.12□□□□□ -0.79
COLCA2-202ENST00000526216 TEX48A0A1B0GUV7 120 aa10.12□□□□□ -0.79
COLCA2-202ENST00000526216 K7EQD1 137 aa10.12□□□□□ -0.79
COLCA2-202ENST00000526216 CIDEAO60543 219 aa10.12□□□□□ -0.79
COLCA2-202ENST00000526216 NDUFA6P56556 154 aa10.12□□□□□ -0.79
COLCA2-202ENST00000526216 NANOS2P60321 138 aaKnown RBP10.12□□□□□ -0.79
COLCA2-202ENST00000526216 COA6Q5JTJ3 125 aaKnown RBP10.12□□□□□ -0.79
COLCA2-202ENST00000526216 NEXN-AS1Q8NBZ9 246 aa10.12□□□□□ -0.79
COLCA2-202ENST00000526216 LAMTOR2Q9Y2Q5 125 aa10.12□□□□□ -0.79
COLCA2-202ENST00000526216 PRSS47A8MTI9 375 aa10.11□□□□□ -0.79
COLCA2-202ENST00000526216 IFI27P40305 119 aaPredicted RBP10.11□□□□□ -0.79
COLCA2-202ENST00000526216 LCE2CQ5TA81 110 aa10.11□□□□□ -0.79
COLCA2-202ENST00000526216 Q6ZTC4 211 aa10.11□□□□□ -0.79
COLCA2-202ENST00000526216 NIT2Q9NQR4 276 aa10.11□□□□□ -0.79
COLCA2-202ENST00000526216 TRBV6-4A0A1B0GX49 114 aa10.1□□□□□ -0.79
COLCA2-202ENST00000526216 ATP5G1P05496 136 aa10.1□□□□□ -0.79
COLCA2-202ENST00000526216 POLR2KP53803 58 aaKnown RBP10.1□□□□□ -0.79
COLCA2-202ENST00000526216 SUMO2P61956 95 aaKnown RBP10.1□□□□□ -0.79
COLCA2-202ENST00000526216 NEGR1Q7Z3B1 354 aa10.1□□□□□ -0.79
COLCA2-202ENST00000526216 MAP1LC3AQ9H492 121 aa10.1□□□□□ -0.79
COLCA2-202ENST00000526216 H7C1H1 209 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 SERF1AO75920 110 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 LINC00694P0DN24 101 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 CRYBA4P53673 196 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 NIT1Q86X76 327 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 BAGE3Q86Y29 109 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 C11orf45Q8TAV5 145 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 VSIG2Q96IQ7 327 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 C20orf78Q9BR46 151 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 TMEM70Q9BUB7 260 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 ST20Q9HBF5 79 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 DNAH7Q8WXX0 4024 aa10.09□□□□□ -0.79
COLCA2-202ENST00000526216 SDHAF1A6NFY7 115 aa10.08□□□□□ -0.8
COLCA2-202ENST00000526216 NHLRC4P0CG21 123 aaPredicted RBP10.08□□□□□ -0.8
COLCA2-202ENST00000526216 HTN3P15516 51 aa10.08□□□□□ -0.8
COLCA2-202ENST00000526216 RPL32P62910 135 aaKnown RBP10.08□□□□□ -0.8
COLCA2-202ENST00000526216 Q8N8P6 123 aa10.08□□□□□ -0.8
COLCA2-202ENST00000526216 HHLA3Q9XRX5 114 aa10.08□□□□□ -0.8
COLCA2-202ENST00000526216 TRBV10-1A0A0K0K1A3 114 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 C5orf52A6NGY3 159 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 F5H768 121 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 PPP1R17O96001 155 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 SNRPEP62304 92 aaKnown RBP10.07□□□□□ -0.8
COLCA2-202ENST00000526216 GAGE1Q13065 139 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 GAGE4Q13068 117 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 GAGE5Q13069 117 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 RHOHQ15669 191 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 DEFB104AQ8WTQ1 72 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 DNAJC30Q96LL9 226 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 PRO0255Q9UI72 69 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 LINC01546A6NGU7 62 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 ESDP10768 282 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 RNASEKQ6P5S7 137 aaKnown RBP10.07□□□□□ -0.8
COLCA2-202ENST00000526216 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 PRSS3P2Q8NHM4 247 aa10.07□□□□□ -0.8
COLCA2-202ENST00000526216 A0A0J9YY99 117 aa10.06□□□□□ -0.8
COLCA2-202ENST00000526216 TRBV27A0A0K0K1C4 114 aa10.06□□□□□ -0.8
COLCA2-202ENST00000526216 TCAPO15273 167 aa10.06□□□□□ -0.8
COLCA2-202ENST00000526216 LINC00614P0C842 121 aa10.06□□□□□ -0.8
COLCA2-202ENST00000526216 UBE2D3P61077 147 aa10.06□□□□□ -0.8
COLCA2-202ENST00000526216 UBE2D2P62837 147 aa10.06□□□□□ -0.8
COLCA2-202ENST00000526216 HIST3H2BBQ8N257 126 aa10.06□□□□□ -0.8
COLCA2-202ENST00000526216 TNFRSF18Q9Y5U5 241 aa10.06□□□□□ -0.8
COLCA2-202ENST00000526216 TRAV26-1A0A087WT03 109 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 A0A096LNJ9 63 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 IGHV3-38A0A0C4DH36 116 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 IFITM10A6NMD0 228 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 PAX4O43316 350 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 TSHBP01222 138 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 S100A6P06703 90 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 GYPEP15421 78 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 PMCHP20382 165 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 PDZD11Q5EBL8 140 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 FA2HQ7L5A8 372 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 PHLDA1Q8WV24 401 aaPredicted RBP10.05□□□□□ -0.8
COLCA2-202ENST00000526216 PRADC1Q9BSG0 188 aa10.05□□□□□ -0.8
COLCA2-202ENST00000526216 NXT2Q9NPJ8 142 aaKnown RBP10.05□□□□□ -0.8
COLCA2-202ENST00000526216 TRBV7-3A0A075B6L6 115 aa10.04□□□□□ -0.8
COLCA2-202ENST00000526216 VCYO14598 125 aa10.04□□□□□ -0.8
COLCA2-202ENST00000526216 RPL36AP83881 106 aaKnown RBP10.04□□□□□ -0.8
COLCA2-202ENST00000526216 PMCHL1Q16048 86 aa10.04□□□□□ -0.8
COLCA2-202ENST00000526216 RPL36ALQ969Q0 106 aaKnown RBP10.04□□□□□ -0.8
COLCA2-202ENST00000526216 CHCHD1Q96BP2 118 aaKnown RBP10.04□□□□□ -0.8
COLCA2-202ENST00000526216 STAB2Q8WWQ8 2551 aa10.03□□□□□ -0.8
COLCA2-202ENST00000526216 DEFB131BA0A096LNP1 70 aa10.03□□□□□ -0.8
COLCA2-202ENST00000526216 FAM19A2Q8N3H0 131 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms