RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 C3orf84H3BNL1 204 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 K7EQD1 137 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 NCR2O95944 276 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 NUDT3O95989 172 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 RAB4AP20338 218 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 RPS10P46783 165 aaKnown RBP4.47□□□□□ -1.69
CD44-214ENST00000525211 CAMPP49913 170 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 GAGE1Q13065 139 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 GAGE4Q13068 117 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 GAGE5Q13069 117 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 ESRGQ1W209 222 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 ZFP2Q6ZN57 461 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 NEGR1Q7Z3B1 354 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 NEXN-AS1Q8NBZ9 246 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 PRO0255Q9UI72 69 aa4.47□□□□□ -1.69
CD44-214ENST00000525211 IGHV3-38A0A0C4DH36 116 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 NUPR2A6NF83 97 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 M0QY20 66 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 PPP1R2P9O14990 202 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 RHEBQ15382 184 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 ZNF56Q15929 161 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 NDUFA5Q16718 116 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 MRPL51Q4U2R6 128 aaKnown RBP4.46□□□□□ -1.7
CD44-214ENST00000525211 TMEM136Q6ZRR5 245 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 AP1S3Q96PC3 154 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 IMMP2LQ96T52 175 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 NDUFAF3Q9BU61 184 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 C1orf43Q9BWL3 253 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 CTDSP1Q9GZU7 261 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 DPH3P1Q9H4G8 78 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 LINC00588Q9Y4M8 146 aa4.46□□□□□ -1.7
CD44-214ENST00000525211 DNAH2Q9P225 4427 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 TRBV6-4A0A1B0GX49 114 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 F5H697 171 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 ATP6V1G1O75348 118 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 RAB4BP61018 213 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 SLAQ13239 276 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 RIGQ13278 110 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 ELOBQ15370 118 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 KIAA1644Q3SXP7 199 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 FAM104BQ5XKR9 115 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 NTM-AS1Q6ZSK4 140 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 SVBPQ8N300 66 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 NRACQ8N912 160 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 ZNRF2Q8NHG8 242 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 TMEM191AQ9H0A3 160 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 KLK5Q9Y337 293 aaPredicted RBP4.45□□□□□ -1.7
CD44-214ENST00000525211 RYR1P21817 5038 aa4.45□□□□□ -1.7
CD44-214ENST00000525211 RHODO00212 210 aa4.44□□□□□ -1.7
CD44-214ENST00000525211 SNAPINO95295 136 aa4.44□□□□□ -1.7
CD44-214ENST00000525211 NPYP01303 97 aa4.44□□□□□ -1.7
CD44-214ENST00000525211 TRGC1P0CF51 173 aa4.44□□□□□ -1.7
CD44-214ENST00000525211 UBE2D3P61077 147 aa4.44□□□□□ -1.7
CD44-214ENST00000525211 UBE2D2P62837 147 aa4.44□□□□□ -1.7
CD44-214ENST00000525211 HBBP68871 147 aa4.44□□□□□ -1.7
CD44-214ENST00000525211 LYPD5Q6UWN5 251 aa4.44□□□□□ -1.7
CD44-214ENST00000525211 TMEM242Q9NWH2 141 aa4.44□□□□□ -1.7
CD44-214ENST00000525211 ICOSQ9Y6W8 199 aa4.44□□□□□ -1.7
CD44-214ENST00000525211 DNAH10Q8IVF4 4471 aa4.44□□□□□ -1.7
CD44-214ENST00000525211 DNAH17Q9UFH2 4485 aa4.43□□□□□ -1.7
CD44-214ENST00000525211 H3BNG1 76 aa4.43□□□□□ -1.7
CD44-214ENST00000525211 RHOHQ15669 191 aa4.43□□□□□ -1.7
CD44-214ENST00000525211 RASL11AQ6T310 242 aa4.43□□□□□ -1.7
CD44-214ENST00000525211 WFDC10BQ8IUB3 73 aa4.43□□□□□ -1.7
CD44-214ENST00000525211 LINC00476Q8WZB0 136 aa4.43□□□□□ -1.7
CD44-214ENST00000525211 BTF3L4Q96K17 158 aa4.43□□□□□ -1.7
CD44-214ENST00000525211 FAM210BQ96KR6 192 aa4.43□□□□□ -1.7
CD44-214ENST00000525211 PRADC1Q9BSG0 188 aa4.43□□□□□ -1.7
CD44-214ENST00000525211 KRTAP1-5Q9BYS1 174 aa4.43□□□□□ -1.7
CD44-214ENST00000525211 IGLV2-18A0A075B6J9 118 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 PRSS29PA6NIE9 313 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 COLCA2A8K830 154 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 D6R8Y8 96 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 CIDEAO60543 219 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 LY6G6CO95867 125 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 SMIM17P0DL12 118 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 MRPL23Q16540 153 aaKnown RBP4.42□□□□□ -1.7
CD44-214ENST00000525211 ATP5L2Q7Z4Y8 100 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 C15orf53Q8NAA6 179 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 ATP6V0E2Q8NHE4 81 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 BORCS7Q96B45 105 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 DNAJC30Q96LL9 226 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 NIT2Q9NQR4 276 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 TNFRSF18Q9Y5U5 241 aa4.42□□□□□ -1.7
CD44-214ENST00000525211 FAT2Q9NYQ8 4349 aa4.41□□□□□ -1.7
CD44-214ENST00000525211 TRBV7-3A0A075B6L6 115 aa4.41□□□□□ -1.7
CD44-214ENST00000525211 TRBV24-1A0A075B6N3 115 aa4.41□□□□□ -1.7
CD44-214ENST00000525211 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
CD44-214ENST00000525211 LCE6AA0A183 80 aa4.41□□□□□ -1.7
CD44-214ENST00000525211 B5MCH6 92 aa4.41□□□□□ -1.7
CD44-214ENST00000525211 PHOX2AO14813 284 aa4.41□□□□□ -1.7
CD44-214ENST00000525211 TSHBP01222 138 aa4.41□□□□□ -1.7
CD44-214ENST00000525211 SRIP30626 198 aa4.41□□□□□ -1.7
CD44-214ENST00000525211 POLR2KP53803 58 aaKnown RBP4.41□□□□□ -1.7
CD44-214ENST00000525211 IQCJQ1A5X6 159 aa4.41□□□□□ -1.7
CD44-214ENST00000525211 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
CD44-214ENST00000525211 TRAV9-1A0A075B6T8 112 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 TRBV10-1A0A0K0K1A3 114 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 TRBV6-5A0A0K0K1A5 114 aa4.4□□□□□ -1.71
CD44-214ENST00000525211 SDHAF1A6NFY7 115 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms