RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 Q9UF83 564 aa9.81□□□□□ -0.84
CAPN1-202ENST00000524773 POLQO75417 2590 aa9.81□□□□□ -0.84
CAPN1-202ENST00000524773 OVOL1O14753 267 aa9.81□□□□□ -0.84
CAPN1-202ENST00000524773 LMO4P61968 165 aa9.81□□□□□ -0.84
CAPN1-202ENST00000524773 SPXQ9BT56 116 aa9.81□□□□□ -0.84
CAPN1-202ENST00000524773 USP9YO00507 2555 aaPredicted RBP9.8□□□□□ -0.84
CAPN1-202ENST00000524773 NTN5Q8WTR8 489 aaPredicted RBP9.8□□□□□ -0.84
CAPN1-202ENST00000524773 TRAV8-3A0A0A6YYJ7 113 aa9.8□□□□□ -0.84
CAPN1-202ENST00000524773 TEX49A0A1B0GTD5 131 aa9.8□□□□□ -0.84
CAPN1-202ENST00000524773 PRSS2P07478 247 aa9.8□□□□□ -0.84
CAPN1-202ENST00000524773 IGHV4-38-2P0DP08 117 aa9.8□□□□□ -0.84
CAPN1-202ENST00000524773 PROK1P58294 105 aa9.8□□□□□ -0.84
CAPN1-202ENST00000524773 ANAPC13Q9BS18 74 aa9.8□□□□□ -0.84
CAPN1-202ENST00000524773 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
CAPN1-202ENST00000524773 DUX5Q96PT3 197 aa9.79□□□□□ -0.84
CAPN1-202ENST00000524773 VCYO14598 125 aa9.79□□□□□ -0.84
CAPN1-202ENST00000524773 ZNF876PQ49A33 203 aa9.79□□□□□ -0.84
CAPN1-202ENST00000524773 TRAV4A0A0B4J268 109 aa9.78□□□□□ -0.84
CAPN1-202ENST00000524773 SPINK13Q1W4C9 94 aa9.78□□□□□ -0.84
CAPN1-202ENST00000524773 FAM19A4Q96LR4 140 aa9.78□□□□□ -0.84
CAPN1-202ENST00000524773 MOB4Q9Y3A3 225 aa9.78□□□□□ -0.84
CAPN1-202ENST00000524773 LENEPQ9Y5L5 61 aa9.78□□□□□ -0.84
CAPN1-202ENST00000524773 B5MCH6 92 aa9.78□□□□□ -0.84
CAPN1-202ENST00000524773 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
CAPN1-202ENST00000524773 FLNCQ14315 2725 aa9.78□□□□□ -0.84
CAPN1-202ENST00000524773 KNCNA6PVL3 124 aa9.77□□□□□ -0.85
CAPN1-202ENST00000524773 H3BUX3 64 aa9.77□□□□□ -0.85
CAPN1-202ENST00000524773 Q8N1Y9 231 aa9.77□□□□□ -0.85
CAPN1-202ENST00000524773 DAND5Q8N907 189 aa9.77□□□□□ -0.85
CAPN1-202ENST00000524773 AKAP9Q99996 3911 aa9.77□□□□□ -0.85
CAPN1-202ENST00000524773 CFAP46Q8IYW2 2715 aa9.77□□□□□ -0.85
CAPN1-202ENST00000524773 ERG28Q9UKR5 140 aa9.77□□□□□ -0.85
CAPN1-202ENST00000524773 PRRC2AP48634 2157 aaKnown RBP9.77□□□□□ -0.85
CAPN1-202ENST00000524773 NDUFA4O00483 81 aa9.76□□□□□ -0.85
CAPN1-202ENST00000524773 HIST2H2BDQ6DRA6 164 aa9.76□□□□□ -0.85
CAPN1-202ENST00000524773 IGSF10Q6WRI0 2623 aa9.76□□□□□ -0.85
CAPN1-202ENST00000524773 TMEM263Q8WUH6 116 aaKnown RBP9.76□□□□□ -0.85
CAPN1-202ENST00000524773 NIPBLQ6KC79 2804 aaeCLIP9.76□□□□□ -0.85
CAPN1-202ENST00000524773 ZNF22P17026 224 aaPredicted RBP9.76□□□□□ -0.85
CAPN1-202ENST00000524773 GNLYP22749 145 aa9.76□□□□□ -0.85
CAPN1-202ENST00000524773 MXRA5Q9NR99 2828 aa9.76□□□□□ -0.85
CAPN1-202ENST00000524773 IGHV4OR15-8A0A075B7B6 117 aa9.75□□□□□ -0.85
CAPN1-202ENST00000524773 A0A087WW49 117 aa9.75□□□□□ -0.85
CAPN1-202ENST00000524773 FAM223BA6NKX1 122 aa9.75□□□□□ -0.85
CAPN1-202ENST00000524773 ADAMTSL4-AS1Q5T5F5 129 aa9.75□□□□□ -0.85
CAPN1-202ENST00000524773 FAM223AQ8IWN6 122 aa9.75□□□□□ -0.85
CAPN1-202ENST00000524773 TMEM223A0PJW6 202 aa9.75□□□□□ -0.85
CAPN1-202ENST00000524773 M0QY20 66 aa9.75□□□□□ -0.85
CAPN1-202ENST00000524773 C19orf54Q5BKX5 351 aa9.75□□□□□ -0.85
CAPN1-202ENST00000524773 ZFAND6Q6FIF0 208 aa9.75□□□□□ -0.85
CAPN1-202ENST00000524773 TEX29Q8N6K0 151 aa9.75□□□□□ -0.85
CAPN1-202ENST00000524773 FBN2P35556 2912 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 KLLNB2CW77 178 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 C3orf56Q8N813 242 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 CLEC2BQ92478 149 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 ZFYVE26Q68DK2 2539 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 IGHV1-69DA0A0B4J2H0 117 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 C19orf84I3L1E1 186 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 RHODO00212 210 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 TRIAP1O43715 76 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 NHLRC4P0CG21 123 aaPredicted RBP9.74□□□□□ -0.85
CAPN1-202ENST00000524773 TMEM141Q96I45 108 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 TIMM17AQ99595 171 aa9.74□□□□□ -0.85
CAPN1-202ENST00000524773 TRBV27A0A0K0K1C4 114 aa9.73□□□□□ -0.85
CAPN1-202ENST00000524773 LYRM7Q5U5X0 104 aa9.73□□□□□ -0.85
CAPN1-202ENST00000524773 SBSPONQ8IVN8 264 aa9.73□□□□□ -0.85
CAPN1-202ENST00000524773 IGHV3-16A0A0C4DH30 117 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 A0A0J9YXY3 114 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 PPP1R17O96001 155 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 TTC32Q5I0X7 151 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 PAPPA-AS1Q5QFB9 102 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 DCANP1Q8TF63 244 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 VCX2Q9H322 139 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 DAZ1Q9NQZ3 744 aaKnown RBP9.72□□□□□ -0.85
CAPN1-202ENST00000524773 IGLV4-3A0A075B6K6 122 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 IGHV4-61A0A0C4DH41 118 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 CCDC179H3BU77 68 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 NXPH4O95158 308 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 SETD2Q9BYW2 2564 aaPredicted RBP9.72□□□□□ -0.85
CAPN1-202ENST00000524773 IGHV3-38A0A0C4DH36 116 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 IGHV3-30-3P0DP02 117 aa9.72□□□□□ -0.85
CAPN1-202ENST00000524773 LEPROTO15243 131 aa9.71□□□□□ -0.85
CAPN1-202ENST00000524773 IGHV1-69P01742 117 aa9.71□□□□□ -0.85
CAPN1-202ENST00000524773 LINC01620Q4KN68 170 aa9.71□□□□□ -0.85
CAPN1-202ENST00000524773 POM121L12Q8N7R1 296 aa9.71□□□□□ -0.85
CAPN1-202ENST00000524773 USP24Q9UPU5 2620 aa9.71□□□□□ -0.85
CAPN1-202ENST00000524773 MYO9AB2RTY4 2548 aa9.71□□□□□ -0.86
CAPN1-202ENST00000524773 MYO18BQ8IUG5 2567 aa9.71□□□□□ -0.86
CAPN1-202ENST00000524773 LGALS9O00182 355 aa9.7□□□□□ -0.86
CAPN1-202ENST00000524773 MED14OSP0DP75 135 aa9.7□□□□□ -0.86
CAPN1-202ENST00000524773 CD28P10747 220 aa9.7□□□□□ -0.86
CAPN1-202ENST00000524773 APRG1Q8IVJ8 170 aa9.7□□□□□ -0.86
CAPN1-202ENST00000524773 C20orf203Q8NBC4 194 aa9.7□□□□□ -0.86
CAPN1-202ENST00000524773 DUX3Q96PT4 197 aa9.7□□□□□ -0.86
CAPN1-202ENST00000524773 SNCGO76070 127 aa9.7□□□□□ -0.86
CAPN1-202ENST00000524773 ZNF625Q96I27 306 aaPredicted RBP9.7□□□□□ -0.86
CAPN1-202ENST00000524773 CITED1Q99966 193 aa9.7□□□□□ -0.86
CAPN1-202ENST00000524773 USP9XQ93008 2570 aaPredicted RBP9.7□□□□□ -0.86
CAPN1-202ENST00000524773 GAGE2BQ13066 116 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms