RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 RGPD2P0DJD1 1756 aa1.11□□□□□ -2.23
PCM1-219ENST00000523540 RGPD5Q99666 1765 aa1.11□□□□□ -2.23
PCM1-219ENST00000523540 ARFGEF2Q9Y6D5 1785 aa1.11□□□□□ -2.23
PCM1-219ENST00000523540 EML5Q05BV3 1969 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 BTAF1O14981 1849 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 BAZ2BQ9UIF8 2168 aaKnown RBP1.1□□□□□ -2.23
PCM1-219ENST00000523540 SCN3AQ9NY46 2000 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 PLXNA1Q9UIW2 1896 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 ANKARQ7Z5J8 1434 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 TRAV3A0A0B4J244 114 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 TRAV1-1A0A0B4J248 108 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 LOC107984156A0A0G2JMH3 177 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 hADV29S1A0JD25 119 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 H7C2G1 150 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 NUPR1O60356 82 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 IGLV1-51P01701 117 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 CRPP02741 224 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 MGST1P10620 155 aaKnown RBP1.1□□□□□ -2.23
PCM1-219ENST00000523540 CBLN1P23435 193 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 FAUP35544 74 aaKnown RBP1.1□□□□□ -2.23
PCM1-219ENST00000523540 ROMO1P60602 79 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 SEC11AP67812 179 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 RBM3P98179 157 aaKnown RBP1.1□□□□□ -2.23
PCM1-219ENST00000523540 RHOHQ15669 191 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 C1orf134Q5TEV5 83 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 SPANXN1Q5VSR9 72 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 CASC2Q6XLA1 102 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 COMMD6Q7Z4G1 85 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 ARL17AQ8IVW1 177 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 FAM19A2Q8N3H0 131 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 Q8N814 137 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 FAM213BQ8TBF2 198 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 DYNLRB2Q8TF09 96 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 PPDPFLQ8WWR9 84 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 MUCL1Q96DR8 90 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 MGST2Q99735 147 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 SMIM7Q9BQ49 75 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 C20orf78Q9BR46 151 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 ST20Q9HBF5 79 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 C14orf132Q9NPU4 83 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 RABAC1Q9UI14 185 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 SPCS1Q9Y6A9 102 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 MUC22E2RYF6 1773 aaPredicted RBP1.1□□□□□ -2.23
PCM1-219ENST00000523540 KDM3BQ7LBC6 1761 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 LRP5O75197 1615 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 RAPGEF6Q8TEU7 1601 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 MADDQ8WXG6 1647 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 GOLGA3Q08378 1498 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 NCOA2Q15596 1464 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 CDK12Q9NYV4 1490 aaPredicted RBP1.1□□□□□ -2.23
PCM1-219ENST00000523540 CUX1P39880 1505 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 LMTK2Q8IWU2 1503 aa1.1□□□□□ -2.23
PCM1-219ENST00000523540 MGAMO43451 1857 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 RGPD1P0DJD0 1748 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 ITSN1Q15811 1721 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 EXPH5Q8NEV8 1989 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 CASP8AP2Q9UKL3 1982 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 TOP2BQ02880 1626 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 IGKV3D-7A0A0C4DH55 119 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 IGKV3OR2-268A0A0C4DH90 116 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 A0A1W2PPM0 123 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 NAP1L6A6NFF2 107 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 IBA57-AS1B1ANH7 110 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 B4DSR2 109 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 C5orf67F2Z3F1 127 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 H3BRM9 83 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 CFDP00746 253 aaPredicted RBP1.09□□□□□ -2.23
PCM1-219ENST00000523540 CCKP06307 115 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 IGLC2P0DOY2 106 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 IGLC3P0DOY3 106 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 ADCYAP1P18509 176 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 KRTDAPP60985 99 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 GNGT1P63211 74 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 CCL8P80075 99 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 ZNF345Q14585 488 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 HMGN3Q15651 99 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 SPANXN5Q5MJ07 72 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 S100A7L2Q5SY68 101 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 RPL7L1Q6DKI1 246 aaKnown RBP1.09□□□□□ -2.23
PCM1-219ENST00000523540 Q6ZQT0 140 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 SLC25A26Q70HW3 274 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 ARPINQ7Z6K5 226 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 OR10AG1Q8NH19 301 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 MYOZ3Q8TDC0 251 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 ZNF431Q8TF32 576 aaPredicted RBP1.09□□□□□ -2.23
PCM1-219ENST00000523540 NDUFA12Q9UI09 145 aa1.09□□□□□ -2.23
PCM1-219ENST00000523540 ATP10BO94823 1461 aa1.09□□□□□ -2.24
PCM1-219ENST00000523540 PTPRMP28827 1452 aa1.09□□□□□ -2.24
PCM1-219ENST00000523540 MLH3Q9UHC1 1453 aa1.09□□□□□ -2.24
PCM1-219ENST00000523540 MYOFQ9NZM1 2061 aa1.09□□□□□ -2.24
PCM1-219ENST00000523540 EFCAB5A4FU69 1503 aa1.09□□□□□ -2.24
PCM1-219ENST00000523540 KIAA1549Q9HCM3 1950 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 MUC4Q99102 2169 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 ABCA6Q8N139 1617 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 BLMP54132 1417 aaPredicted RBP1.08□□□□□ -2.24
PCM1-219ENST00000523540 CFAP43Q8NDM7 1665 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 BRWD1Q9NSI6 2320 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 IGKV1D-42A0A075B6H8 117 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 TRAV2A0A0B4J234 112 aa1.08□□□□□ -2.24
PCM1-219ENST00000523540 CRYM-AS1A6NIL9 109 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms