RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 AMTP48728 403 aa10.73□□□□□ -0.69
CSGALNACT1-211ENST00000522854 SBSPONQ8IVN8 264 aa10.73□□□□□ -0.69
CSGALNACT1-211ENST00000522854 MRAPQ8TCY5 172 aa10.73□□□□□ -0.69
CSGALNACT1-211ENST00000522854 PTH2Q96A98 100 aa10.73□□□□□ -0.69
CSGALNACT1-211ENST00000522854 TCAPO15273 167 aa10.72□□□□□ -0.69
CSGALNACT1-211ENST00000522854 ESDP10768 282 aa10.72□□□□□ -0.69
CSGALNACT1-211ENST00000522854 LGALS9BQ3B8N2 356 aa10.72□□□□□ -0.69
CSGALNACT1-211ENST00000522854 FAM222AQ5U5X8 452 aa10.72□□□□□ -0.69
CSGALNACT1-211ENST00000522854 CELA1Q9UNI1 258 aa10.72□□□□□ -0.69
CSGALNACT1-211ENST00000522854 IGLV2-18A0A075B6J9 118 aa10.72□□□□□ -0.69
CSGALNACT1-211ENST00000522854 IGHV1-24A0A0C4DH33 117 aa10.72□□□□□ -0.69
CSGALNACT1-211ENST00000522854 SUMO2P61956 95 aaKnown RBP10.72□□□□□ -0.69
CSGALNACT1-211ENST00000522854 KPRPQ5T749 579 aaPredicted RBP10.72□□□□□ -0.69
CSGALNACT1-211ENST00000522854 FA2HQ7L5A8 372 aa10.72□□□□□ -0.69
CSGALNACT1-211ENST00000522854 DNAH9Q9NYC9 4486 aa10.71□□□□□ -0.69
CSGALNACT1-211ENST00000522854 COL7A1Q02388 2944 aa10.71□□□□□ -0.69
CSGALNACT1-211ENST00000522854 SMIM9A6NGZ8 99 aa10.71□□□□□ -0.69
CSGALNACT1-211ENST00000522854 PIK3CD-AS1Q5SR53 167 aa10.71□□□□□ -0.69
CSGALNACT1-211ENST00000522854 AP5S1Q9NUS5 200 aa10.71□□□□□ -0.69
CSGALNACT1-211ENST00000522854 LINC00173Q6ZV60 143 aa10.7□□□□□ -0.7
CSGALNACT1-211ENST00000522854 LAMTOR2Q9Y2Q5 125 aa10.7□□□□□ -0.7
CSGALNACT1-211ENST00000522854 A0A096LNJ9 63 aa10.7□□□□□ -0.7
CSGALNACT1-211ENST00000522854 LINC00587B1AMM8 73 aa10.7□□□□□ -0.7
CSGALNACT1-211ENST00000522854 TRAV4A0A0B4J268 109 aa10.69□□□□□ -0.7
CSGALNACT1-211ENST00000522854 CHCHD1Q96BP2 118 aaKnown RBP10.69□□□□□ -0.7
CSGALNACT1-211ENST00000522854 SMIM2Q9BVW6 85 aa10.69□□□□□ -0.7
CSGALNACT1-211ENST00000522854 SDHAF1A6NFY7 115 aa10.68□□□□□ -0.7
CSGALNACT1-211ENST00000522854 MIFP14174 115 aa10.68□□□□□ -0.7
CSGALNACT1-211ENST00000522854 CTAG1AP78358 180 aa10.68□□□□□ -0.7
CSGALNACT1-211ENST00000522854 DKK2Q9UBU2 259 aa10.68□□□□□ -0.7
CSGALNACT1-211ENST00000522854 Q8N8P6 123 aa10.68□□□□□ -0.7
CSGALNACT1-211ENST00000522854 TMEM70Q9BUB7 260 aa10.68□□□□□ -0.7
CSGALNACT1-211ENST00000522854 ST20Q9HBF5 79 aa10.68□□□□□ -0.7
CSGALNACT1-211ENST00000522854 RHODO00212 210 aa10.67□□□□□ -0.7
CSGALNACT1-211ENST00000522854 PKIAP61925 76 aa10.67□□□□□ -0.7
CSGALNACT1-211ENST00000522854 SLC25A29Q8N8R3 303 aa10.67□□□□□ -0.7
CSGALNACT1-211ENST00000522854 PRKDCP78527 4128 aaKnown RBP10.67□□□□□ -0.7
CSGALNACT1-211ENST00000522854 LOC100131303A0A0U1RQF7 123 aa10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 CDPF1Q6NVV7 123 aa10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 ZFP2Q6ZN57 461 aa10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 NEXN-AS1Q8NBZ9 246 aa10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 C20orf78Q9BR46 151 aa10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 NXT2Q9NPJ8 142 aaKnown RBP10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 IGHV3-38A0A0C4DH36 116 aa10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 PRSS47A8MTI9 375 aa10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 TSTD3H0UI37 97 aa10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 POLR2KP53803 58 aaKnown RBP10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 LINC00612Q8N6U2 182 aa10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 NDUFAF3Q9BU61 184 aa10.66□□□□□ -0.7
CSGALNACT1-211ENST00000522854 FHL2Q14192 279 aa10.65□□□□□ -0.7
CSGALNACT1-211ENST00000522854 PHLDA1Q8WV24 401 aaPredicted RBP10.65□□□□□ -0.7
CSGALNACT1-211ENST00000522854 MEGF8Q7Z7M0 2845 aa10.65□□□□□ -0.7
CSGALNACT1-211ENST00000522854 TRGV4A0A0C4DH28 118 aa10.65□□□□□ -0.71
CSGALNACT1-211ENST00000522854 TRBV6-5A0A0K0K1A5 114 aa10.64□□□□□ -0.71
CSGALNACT1-211ENST00000522854 LINC01546A6NGU7 62 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 LYRM9A8MSI8 78 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 H7C1H1 209 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 K7EQD1 137 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 PPP1R17O96001 155 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 BTF3P20290 206 aaKnown RBP10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 KRTDAPP60985 99 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 ZNRF2Q8NHG8 242 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 C18orf15Q96N68 181 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 TP53TG1Q9Y2A0 90 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 TNFRSF18Q9Y5U5 241 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 GAGE12JA6NER3 117 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 LEPROTL1O95214 131 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 DAD1P61803 113 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 GAGE1Q13065 139 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 GAGE4Q13068 117 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 GAGE5Q13069 117 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 LAGE3Q14657 143 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 GAGE13Q4V321 117 aa10.63□□□□□ -0.71
CSGALNACT1-211ENST00000522854 A0A0J9YWU9 116 aa10.62□□□□□ -0.71
CSGALNACT1-211ENST00000522854 TRBV27A0A0K0K1C4 114 aa10.62□□□□□ -0.71
CSGALNACT1-211ENST00000522854 H0Y8G0 127 aa10.62□□□□□ -0.71
CSGALNACT1-211ENST00000522854 SCGB1D1O95968 90 aa10.62□□□□□ -0.71
CSGALNACT1-211ENST00000522854 HTN3P15516 51 aa10.62□□□□□ -0.71
CSGALNACT1-211ENST00000522854 SPATA12Q7Z6I5 190 aa10.62□□□□□ -0.71
CSGALNACT1-211ENST00000522854 EDA2RQ9HAV5 297 aa10.62□□□□□ -0.71
CSGALNACT1-211ENST00000522854 VCYO14598 125 aa10.61□□□□□ -0.71
CSGALNACT1-211ENST00000522854 NUDT3O95989 172 aa10.61□□□□□ -0.71
CSGALNACT1-211ENST00000522854 HBDP02042 147 aa10.61□□□□□ -0.71
CSGALNACT1-211ENST00000522854 C3orf79P0CE67 100 aa10.61□□□□□ -0.71
CSGALNACT1-211ENST00000522854 TSHBP01222 138 aa10.61□□□□□ -0.71
CSGALNACT1-211ENST00000522854 SPART-AS1P0CW21 52 aa10.61□□□□□ -0.71
CSGALNACT1-211ENST00000522854 DEFA6Q01524 100 aa10.61□□□□□ -0.71
CSGALNACT1-211ENST00000522854 RPL39P62891 51 aaKnown RBP10.6□□□□□ -0.71
CSGALNACT1-211ENST00000522854 TM2D3Q9BRN9 247 aa10.6□□□□□ -0.71
CSGALNACT1-211ENST00000522854 HHLA3Q9XRX5 114 aa10.6□□□□□ -0.71
CSGALNACT1-211ENST00000522854 A0A0J9YY99 117 aa10.59□□□□□ -0.71
CSGALNACT1-211ENST00000522854 FCER1GP30273 86 aa10.59□□□□□ -0.71
CSGALNACT1-211ENST00000522854 C12orf74Q32Q52 190 aa10.59□□□□□ -0.71
CSGALNACT1-211ENST00000522854 KIR2DL4Q99706 377 aa10.59□□□□□ -0.71
CSGALNACT1-211ENST00000522854 TRBV7-3A0A075B6L6 115 aa10.59□□□□□ -0.71
CSGALNACT1-211ENST00000522854 I3L3M4 83 aa10.59□□□□□ -0.71
CSGALNACT1-211ENST00000522854 DDTP30046 118 aa10.59□□□□□ -0.71
CSGALNACT1-211ENST00000522854 PRO1933Q9H354 126 aa10.59□□□□□ -0.71
CSGALNACT1-211ENST00000522854 TRBV6-4A0A1B0GX49 114 aa10.58□□□□□ -0.72
CSGALNACT1-211ENST00000522854 RPL32P62910 135 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms