RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-210ENST00000521667 C2orf66Q6UXQ4 117 aa13.42□□□□□ -0.26
TRAPPC9-210ENST00000521667 KIR2DL4Q99706 377 aa13.42□□□□□ -0.26
TRAPPC9-210ENST00000521667 AZU1P20160 251 aa13.41□□□□□ -0.26
TRAPPC9-210ENST00000521667 SCGB3A1Q96QR1 104 aa13.41□□□□□ -0.26
TRAPPC9-210ENST00000521667 EDA2RQ9HAV5 297 aa13.41□□□□□ -0.26
TRAPPC9-210ENST00000521667 UFSP1Q6NVU6 142 aa13.4□□□□□ -0.26
TRAPPC9-210ENST00000521667 H7C1H1 209 aa13.4□□□□□ -0.26
TRAPPC9-210ENST00000521667 G0S2P27469 103 aa13.4□□□□□ -0.26
TRAPPC9-210ENST00000521667 ZMAT4Q9H898 229 aa13.4□□□□□ -0.26
TRAPPC9-210ENST00000521667 IGHV3-73A0A0B4J1V6 119 aa13.39□□□□□ -0.27
TRAPPC9-210ENST00000521667 GIG44P09565 113 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC9-210ENST00000521667 ZFP2Q6ZN57 461 aa13.39□□□□□ -0.27
TRAPPC9-210ENST00000521667 MRPL16Q9NX20 251 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-210ENST00000521667 RPL35AP18077 110 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-210ENST00000521667 CFAP126Q5VTH2 177 aa13.39□□□□□ -0.27
TRAPPC9-210ENST00000521667 SLC25A34Q6PIV7 304 aa13.39□□□□□ -0.27
TRAPPC9-210ENST00000521667 MRPS16Q9Y3D3 137 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-210ENST00000521667 ANKRD39Q53RE8 183 aa13.38□□□□□ -0.27
TRAPPC9-210ENST00000521667 STPG4Q8N801 248 aa13.38□□□□□ -0.27
TRAPPC9-210ENST00000521667 IL17DQ8TAD2 202 aa13.38□□□□□ -0.27
TRAPPC9-210ENST00000521667 CYSLTR1Q9Y271 337 aa13.38□□□□□ -0.27
TRAPPC9-210ENST00000521667 LINC01549A6NIU2 74 aa13.37□□□□□ -0.27
TRAPPC9-210ENST00000521667 RNASE8Q8TDE3 154 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-210ENST00000521667 CITED1Q99966 193 aa13.37□□□□□ -0.27
TRAPPC9-210ENST00000521667 A0A087WX48 190 aa13.37□□□□□ -0.27
TRAPPC9-210ENST00000521667 RHODO00212 210 aa13.37□□□□□ -0.27
TRAPPC9-210ENST00000521667 IGKCP01834 107 aa13.37□□□□□ -0.27
TRAPPC9-210ENST00000521667 INSL3P51460 131 aa13.37□□□□□ -0.27
TRAPPC9-210ENST00000521667 ERASQ7Z444 233 aa13.37□□□□□ -0.27
TRAPPC9-210ENST00000521667 C1QTNF4Q9BXJ3 329 aa13.37□□□□□ -0.27
TRAPPC9-210ENST00000521667 TRAV12-1A0A0B4J245 112 aa13.36□□□□□ -0.27
TRAPPC9-210ENST00000521667 DPM2O94777 84 aa13.36□□□□□ -0.27
TRAPPC9-210ENST00000521667 COX8AP10176 69 aa13.36□□□□□ -0.27
TRAPPC9-210ENST00000521667 DEFB104AQ8WTQ1 72 aa13.36□□□□□ -0.27
TRAPPC9-210ENST00000521667 TMEM263Q8WUH6 116 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-210ENST00000521667 TP73-AS1Q9UF72 201 aa13.36□□□□□ -0.27
TRAPPC9-210ENST00000521667 MAST4O15021 2626 aa13.36□□□□□ -0.27
TRAPPC9-210ENST00000521667 RS1O15537 224 aa13.35□□□□□ -0.27
TRAPPC9-210ENST00000521667 RIPPLY3P57055 190 aa13.35□□□□□ -0.27
TRAPPC9-210ENST00000521667 MRPL35Q9NZE8 188 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-210ENST00000521667 TP53TG1Q9Y2A0 90 aa13.35□□□□□ -0.27
TRAPPC9-210ENST00000521667 C9orf66Q5T8R8 295 aa13.35□□□□□ -0.27
TRAPPC9-210ENST00000521667 I3L3M4 83 aa13.34□□□□□ -0.27
TRAPPC9-210ENST00000521667 NEXN-AS1Q8NBZ9 246 aa13.34□□□□□ -0.27
TRAPPC9-210ENST00000521667 HHLA3Q9XRX5 114 aa13.34□□□□□ -0.27
TRAPPC9-210ENST00000521667 ATRQ13535 2644 aa13.34□□□□□ -0.27
TRAPPC9-210ENST00000521667 RHOHQ15669 191 aa13.34□□□□□ -0.27
TRAPPC9-210ENST00000521667 SPATA3Q8NHX4 192 aa13.34□□□□□ -0.27
TRAPPC9-210ENST00000521667 TSHBP01222 138 aa13.33□□□□□ -0.28
TRAPPC9-210ENST00000521667 P0DMU3 169 aa13.33□□□□□ -0.28
TRAPPC9-210ENST00000521667 FAM231AP0DMU4 169 aa13.33□□□□□ -0.28
TRAPPC9-210ENST00000521667 FAM231CP0DMU5 169 aa13.33□□□□□ -0.28
TRAPPC9-210ENST00000521667 Q6ZSN1 163 aa13.33□□□□□ -0.28
TRAPPC9-210ENST00000521667 CSNK1G2-AS1Q8NCQ2 148 aa13.33□□□□□ -0.28
TRAPPC9-210ENST00000521667 BAALCQ8WXS3 180 aa13.33□□□□□ -0.28
TRAPPC9-210ENST00000521667 VWFP04275 2813 aa13.32□□□□□ -0.28
TRAPPC9-210ENST00000521667 TRGV1A0A0A0MS02 117 aa13.32□□□□□ -0.28
TRAPPC9-210ENST00000521667 BATFQ16520 125 aa13.32□□□□□ -0.28
TRAPPC9-210ENST00000521667 GTSCR1Q86UQ5 136 aa13.32□□□□□ -0.28
TRAPPC9-210ENST00000521667 IGIPA6NJ69 53 aa13.32□□□□□ -0.28
TRAPPC9-210ENST00000521667 F8VRH5 84 aa13.32□□□□□ -0.28
TRAPPC9-210ENST00000521667 IGHV3-53P01767 116 aa13.32□□□□□ -0.28
TRAPPC9-210ENST00000521667 PLNP26678 52 aa13.32□□□□□ -0.28
TRAPPC9-210ENST00000521667 RPL39P62891 51 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-210ENST00000521667 TNFRSF18Q9Y5U5 241 aa13.32□□□□□ -0.28
TRAPPC9-210ENST00000521667 FBN1P35555 2871 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-210ENST00000521667 TCTAP57738 103 aa13.31□□□□□ -0.28
TRAPPC9-210ENST00000521667 C16orf74Q96GX8 76 aa13.31□□□□□ -0.28
TRAPPC9-210ENST00000521667 CHTOPQ9Y3Y2 248 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-210ENST00000521667 KRTAP24-1Q3LI83 254 aa13.3□□□□□ -0.28
TRAPPC9-210ENST00000521667 TMEM141Q96I45 108 aa13.3□□□□□ -0.28
TRAPPC9-210ENST00000521667 TIMM17AQ99595 171 aa13.3□□□□□ -0.28
TRAPPC9-210ENST00000521667 FGF6P10767 208 aa13.3□□□□□ -0.28
TRAPPC9-210ENST00000521667 ZC2HC1BQ5TFG8 222 aa13.3□□□□□ -0.28
TRAPPC9-210ENST00000521667 OR4C5Q8NGB2 326 aa13.3□□□□□ -0.28
TRAPPC9-210ENST00000521667 DAZ2Q13117 558 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-210ENST00000521667 PRSS29PA6NIE9 313 aa13.29□□□□□ -0.28
TRAPPC9-210ENST00000521667 NMUP48645 174 aa13.29□□□□□ -0.28
TRAPPC9-210ENST00000521667 Q6ZTI0 123 aa13.29□□□□□ -0.28
TRAPPC9-210ENST00000521667 PRIMA1Q86XR5 153 aa13.29□□□□□ -0.28
TRAPPC9-210ENST00000521667 BOD1L2Q8IYS8 172 aa13.29□□□□□ -0.28
TRAPPC9-210ENST00000521667 DNAJC30Q96LL9 226 aa13.29□□□□□ -0.28
TRAPPC9-210ENST00000521667 PLAC8L1A1L4L8 177 aa13.28□□□□□ -0.28
TRAPPC9-210ENST00000521667 RRN3P1Q2M238 152 aa13.28□□□□□ -0.28
TRAPPC9-210ENST00000521667 C20orf203Q8NBC4 194 aa13.28□□□□□ -0.28
TRAPPC9-210ENST00000521667 NOP10Q9NPE3 64 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-210ENST00000521667 Q9UF83 564 aa13.28□□□□□ -0.28
TRAPPC9-210ENST00000521667 HINT1P49773 126 aaPredicted RBP13.27□□□□□ -0.28
TRAPPC9-210ENST00000521667 DLEU1O43261 78 aa13.27□□□□□ -0.29
TRAPPC9-210ENST00000521667 C2orf91Q6ZV80 131 aa13.26□□□□□ -0.29
TRAPPC9-210ENST00000521667 ZNF479Q96JC4 524 aa13.26□□□□□ -0.29
TRAPPC9-210ENST00000521667 IGKV2D-26A0A0A0MRZ7 120 aa13.25□□□□□ -0.29
TRAPPC9-210ENST00000521667 TRAV4A0A0B4J268 109 aa13.25□□□□□ -0.29
TRAPPC9-210ENST00000521667 PMVKQ15126 192 aa13.25□□□□□ -0.29
TRAPPC9-210ENST00000521667 PCP2Q8IVA1 136 aa13.25□□□□□ -0.29
TRAPPC9-210ENST00000521667 NACAE9PAV3 2078 aa13.25□□□□□ -0.29
TRAPPC9-210ENST00000521667 COL5A1-AS1Q5SY13 56 aa13.25□□□□□ -0.29
TRAPPC9-210ENST00000521667 OVOL2Q9BRP0 275 aa13.24□□□□□ -0.29
TRAPPC9-210ENST00000521667 MPV17L2Q567V2 206 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms