RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 PRR27Q6MZM9 219 aa8.07□□□□□ -1.12
SRGAP3-212ENST00000520860 ARL2-SNX15V9GYD0 113 aa8.07□□□□□ -1.12
SRGAP3-212ENST00000520860 TRBV6-1A0A0K0K1D8 114 aa8.06□□□□□ -1.12
SRGAP3-212ENST00000520860 LRRC37A5PQ49AS3 106 aa8.06□□□□□ -1.12
SRGAP3-212ENST00000520860 HIGD2BQ4VC39 106 aa8.06□□□□□ -1.12
SRGAP3-212ENST00000520860 C15orf56Q8N910 161 aa8.06□□□□□ -1.12
SRGAP3-212ENST00000520860 C20orf203Q8NBC4 194 aa8.06□□□□□ -1.12
SRGAP3-212ENST00000520860 NUDT15Q9NV35 164 aa8.06□□□□□ -1.12
SRGAP3-212ENST00000520860 PKIGQ9Y2B9 76 aa8.06□□□□□ -1.12
SRGAP3-212ENST00000520860 TRAV34A0A0B4J273 112 aa8.05□□□□□ -1.12
SRGAP3-212ENST00000520860 IGHV1-24A0A0C4DH33 117 aa8.05□□□□□ -1.12
SRGAP3-212ENST00000520860 RAB2AP61019 212 aa8.05□□□□□ -1.12
SRGAP3-212ENST00000520860 IQCJQ1A5X6 159 aa8.05□□□□□ -1.12
SRGAP3-212ENST00000520860 PRR26Q8N8Z3 221 aa8.05□□□□□ -1.12
SRGAP3-212ENST00000520860 TMSB15BA0A087X1C1 80 aa8.04□□□□□ -1.12
SRGAP3-212ENST00000520860 F5H697 171 aa8.04□□□□□ -1.12
SRGAP3-212ENST00000520860 SULT1A2P50226 295 aa8.04□□□□□ -1.12
SRGAP3-212ENST00000520860 ENKURQ8TC29 256 aa8.04□□□□□ -1.12
SRGAP3-212ENST00000520860 SDHCQ99643 169 aaPredicted RBP8.04□□□□□ -1.12
SRGAP3-212ENST00000520860 GAGE12HA6NDE8 117 aa8.03□□□□□ -1.12
SRGAP3-212ENST00000520860 LYRM1O43325 122 aa8.03□□□□□ -1.12
SRGAP3-212ENST00000520860 SH2D1AO60880 128 aa8.03□□□□□ -1.12
SRGAP3-212ENST00000520860 GCHFRP30047 84 aa8.03□□□□□ -1.12
SRGAP3-212ENST00000520860 CDC34P49427 236 aaPredicted RBP8.03□□□□□ -1.12
SRGAP3-212ENST00000520860 SMIM3Q9BZL3 60 aa8.03□□□□□ -1.12
SRGAP3-212ENST00000520860 GFRA4Q9GZZ7 299 aa8.03□□□□□ -1.12
SRGAP3-212ENST00000520860 HSPB11Q9Y547 144 aa8.03□□□□□ -1.12
SRGAP3-212ENST00000520860 IGLV4-60A0A075B6I1 120 aa8.02□□□□□ -1.13
SRGAP3-212ENST00000520860 A0A1B0GUV1 79 aa8.02□□□□□ -1.13
SRGAP3-212ENST00000520860 FAM240BA0A1B0GVZ2 78 aa8.02□□□□□ -1.13
SRGAP3-212ENST00000520860 H0YIZ8 118 aa8.02□□□□□ -1.13
SRGAP3-212ENST00000520860 STAG3L2P0CL84 134 aa8.02□□□□□ -1.13
SRGAP3-212ENST00000520860 STAG3L3P0CL85 134 aa8.02□□□□□ -1.13
SRGAP3-212ENST00000520860 FAM162BQ5T6X4 162 aa8.02□□□□□ -1.13
SRGAP3-212ENST00000520860 Q86TA4 180 aa8.02□□□□□ -1.13
SRGAP3-212ENST00000520860 AQP10Q96PS8 301 aa8.02□□□□□ -1.13
SRGAP3-212ENST00000520860 SIX6O95475 246 aa8.01□□□□□ -1.13
SRGAP3-212ENST00000520860 CRIP1P50238 77 aa8.01□□□□□ -1.13
SRGAP3-212ENST00000520860 LINC01559Q495D7 138 aa8.01□□□□□ -1.13
SRGAP3-212ENST00000520860 SUN5Q8TC36 379 aa8.01□□□□□ -1.13
SRGAP3-212ENST00000520860 TMEM167BQ9NRX6 74 aa8.01□□□□□ -1.13
SRGAP3-212ENST00000520860 GVQW2A0A096LPI5 108 aaPredicted RBP8□□□□□ -1.13
SRGAP3-212ENST00000520860 PLA2G10O15496 165 aa8□□□□□ -1.13
SRGAP3-212ENST00000520860 MT-ND6P03923 174 aa8□□□□□ -1.13
SRGAP3-212ENST00000520860 H2AFB2P0C5Z0 115 aa8□□□□□ -1.13
SRGAP3-212ENST00000520860 RAB24Q969Q5 203 aa8□□□□□ -1.13
SRGAP3-212ENST00000520860 TMEM243Q9BU79 118 aa8□□□□□ -1.13
SRGAP3-212ENST00000520860 ZNF471Q9BX82 626 aaPredicted RBP8□□□□□ -1.13
SRGAP3-212ENST00000520860 IFITM3Q01628 133 aa7.99□□□□□ -1.13
SRGAP3-212ENST00000520860 IGKV3OR2-268A0A0C4DH90 116 aa7.98□□□□□ -1.13
SRGAP3-212ENST00000520860 PEX7O00628 323 aa7.98□□□□□ -1.13
SRGAP3-212ENST00000520860 CYCSP99999 105 aaKnown RBP7.98□□□□□ -1.13
SRGAP3-212ENST00000520860 FER1L6-AS1Q8NA97 138 aa7.98□□□□□ -1.13
SRGAP3-212ENST00000520860 INO80EQ8NBZ0 244 aaPredicted RBP7.98□□□□□ -1.13
SRGAP3-212ENST00000520860 OR10AG1Q8NH19 301 aa7.98□□□□□ -1.13
SRGAP3-212ENST00000520860 DIRC1Q969H9 104 aa7.98□□□□□ -1.13
SRGAP3-212ENST00000520860 ZFP30Q9Y2G7 519 aa7.98□□□□□ -1.13
SRGAP3-212ENST00000520860 A0A1W2PRE2 83 aa7.97□□□□□ -1.13
SRGAP3-212ENST00000520860 UBE2L6O14933 153 aa7.97□□□□□ -1.13
SRGAP3-212ENST00000520860 CXorf1O96002 111 aa7.97□□□□□ -1.13
SRGAP3-212ENST00000520860 SMIM17P0DL12 118 aa7.97□□□□□ -1.13
SRGAP3-212ENST00000520860 RPL12P30050 165 aaKnown RBP7.97□□□□□ -1.13
SRGAP3-212ENST00000520860 ZNF674Q2M3X9 581 aa7.97□□□□□ -1.13
SRGAP3-212ENST00000520860 C1orf137Q5JT78 98 aa7.97□□□□□ -1.13
SRGAP3-212ENST00000520860 CARD19Q96LW7 228 aa7.97□□□□□ -1.13
SRGAP3-212ENST00000520860 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.14
SRGAP3-212ENST00000520860 SPANXN1Q5VSR9 72 aa7.96□□□□□ -1.14
SRGAP3-212ENST00000520860 COX8CQ7Z4L0 72 aa7.96□□□□□ -1.14
SRGAP3-212ENST00000520860 WFDC1Q9HC57 220 aa7.96□□□□□ -1.14
SRGAP3-212ENST00000520860 CRCT1Q9UGL9 99 aa7.96□□□□□ -1.14
SRGAP3-212ENST00000520860 PET100P0DJ07 73 aa7.95□□□□□ -1.14
SRGAP3-212ENST00000520860 PPP1R1CQ8WVI7 109 aa7.95□□□□□ -1.14
SRGAP3-212ENST00000520860 CHCHD10Q8WYQ3 142 aaPredicted RBP7.95□□□□□ -1.14
SRGAP3-212ENST00000520860 HIST1H2BAQ96A08 127 aa7.95□□□□□ -1.14
SRGAP3-212ENST00000520860 MARVELD1Q9BSK0 173 aa7.95□□□□□ -1.14
SRGAP3-212ENST00000520860 TRAV1-1A0A0B4J248 108 aa7.94□□□□□ -1.14
SRGAP3-212ENST00000520860 MUC21A0A140T8X8 626 aa7.94□□□□□ -1.14
SRGAP3-212ENST00000520860 INMT-MINDY4F8WBC2 141 aa7.94□□□□□ -1.14
SRGAP3-212ENST00000520860 UBE2D1P51668 147 aa7.94□□□□□ -1.14
SRGAP3-212ENST00000520860 PTTG1IPP53801 180 aa7.94□□□□□ -1.14
SRGAP3-212ENST00000520860 UBE2G1P62253 170 aa7.94□□□□□ -1.14
SRGAP3-212ENST00000520860 GAGE2BQ13066 116 aa7.94□□□□□ -1.14
SRGAP3-212ENST00000520860 AMTP48728 403 aa7.93□□□□□ -1.14
SRGAP3-212ENST00000520860 UBE2G2P60604 165 aa7.93□□□□□ -1.14
SRGAP3-212ENST00000520860 SSTP61278 116 aa7.93□□□□□ -1.14
SRGAP3-212ENST00000520860 FMC1Q96HJ9 113 aa7.93□□□□□ -1.14
SRGAP3-212ENST00000520860 AP1S3Q96PC3 154 aa7.93□□□□□ -1.14
SRGAP3-212ENST00000520860 ACTR3CQ9C0K3 210 aaPredicted RBP7.93□□□□□ -1.14
SRGAP3-212ENST00000520860 FSIP2Q5CZC0 6907 aa7.92□□□□□ -1.14
SRGAP3-212ENST00000520860 H0Y9J4 135 aa7.92□□□□□ -1.14
SRGAP3-212ENST00000520860 MPC2O95563 127 aa7.92□□□□□ -1.14
SRGAP3-212ENST00000520860 MBP02144 154 aa7.92□□□□□ -1.14
SRGAP3-212ENST00000520860 MGPP08493 103 aa7.92□□□□□ -1.14
SRGAP3-212ENST00000520860 Q6ZNX1 250 aa7.92□□□□□ -1.14
SRGAP3-212ENST00000520860 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
SRGAP3-212ENST00000520860 LOC107984640A0A0U1RRK4 108 aa7.91□□□□□ -1.14
SRGAP3-212ENST00000520860 A0A1W2PNN7 141 aa7.91□□□□□ -1.14
SRGAP3-212ENST00000520860 M0QY20 66 aa7.91□□□□□ -1.14
SRGAP3-212ENST00000520860 SNAI2O43623 268 aa7.91□□□□□ -1.14
SRGAP3-212ENST00000520860 IGLV7-43P04211 117 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms