RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 CCL4P13236 92 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 ETV6P41212 452 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 CASC2Q6XLA1 102 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 OR5AS1Q8N127 324 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 METTL1Q9UBP6 276 aaKnown RBP1.72□□□□□ -2.13
SREK1-208ENST00000520580 IGF2RP11717 2491 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 ALPK2Q86TB3 2170 aa1.72□□□□□ -2.13
SREK1-208ENST00000520580 MYOM3Q5VTT5 1437 aa1.71□□□□□ -2.13
SREK1-208ENST00000520580 SDK1Q7Z5N4 2213 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 ZFHX3Q15911 3703 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 CNBPP62633 177 aaKnown RBP1.71□□□□□ -2.14
SREK1-208ENST00000520580 ZNF625Q96I27 306 aaPredicted RBP1.71□□□□□ -2.14
SREK1-208ENST00000520580 CGREF1Q99674 301 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 C2orf88Q9BSF0 95 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 BCORQ6W2J9 1755 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 KDM3BQ7LBC6 1761 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 MYOFQ9NZM1 2061 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 MYH6P13533 1939 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 CHD7Q9P2D1 2997 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 COL4A4P53420 1690 aaPredicted RBP1.71□□□□□ -2.14
SREK1-208ENST00000520580 FREM2Q5SZK8 3169 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 TRBV6-5A0A0K0K1A5 114 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 F8W1H4 67 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 GUCA1AP43080 201 aaPredicted RBP1.71□□□□□ -2.14
SREK1-208ENST00000520580 KRTAP10-1P60331 282 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 ZNF833PQ6ZTB9 187 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 C1orf54Q8WWF1 131 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 SDF2Q99470 211 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 SMIM7Q9BQ49 75 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 HELZP42694 1942 aaKnown RBP1.71□□□□□ -2.14
SREK1-208ENST00000520580 MAP2P11137 1827 aaKnown RBP1.71□□□□□ -2.14
SREK1-208ENST00000520580 ARFGEF3Q5TH69 2177 aa1.71□□□□□ -2.14
SREK1-208ENST00000520580 WDFY3Q8IZQ1 3526 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 OTOGLQ3ZCN5 2332 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 CELSR3Q9NYQ7 3312 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 ASXL3Q9C0F0 2248 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 OBSCNQ5VST9 7968 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 MYH13Q9UKX3 1938 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 LOC100130705A0A1B0GUX0 176 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 J3QKU1 62 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 GBF1Q92538 1859 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 MYLKQ15746 1914 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 INTS1Q8N201 2190 aaKnown RBP1.7□□□□□ -2.14
SREK1-208ENST00000520580 LAMA5O15230 3695 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 CHD3Q12873 2000 aaKnown RBP1.7□□□□□ -2.14
SREK1-208ENST00000520580 A0A0G2JMM0 328 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 A0A1W2PPB8 328 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 KIR3DP1A8MWS1 328 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 CDC42EP2O14613 210 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 CCL16O15467 120 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 NCR2O95944 276 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 ZNF25P17030 456 aaPredicted RBP1.7□□□□□ -2.14
SREK1-208ENST00000520580 SNX29P2Q8IUI4 249 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 C5orf17Q8NAS9 161 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 OR10AC1Q8NH08 325 aa1.7□□□□□ -2.14
SREK1-208ENST00000520580 SOX21Q9Y651 276 aaPredicted RBP1.7□□□□□ -2.14
SREK1-208ENST00000520580 SSC5DA1L4H1 1573 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 A0A0G2JMZ2 1700 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 COL5A3P25940 1745 aaPredicted RBP1.69□□□□□ -2.14
SREK1-208ENST00000520580 DDX60LQ5H9U9 1706 aaKnown RBP1.69□□□□□ -2.14
SREK1-208ENST00000520580 PLXNA1Q9UIW2 1896 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 DNHD1Q96M86 4753 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 MYH7P12883 1935 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 A0A087WSZ3 146 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 KRTAP9-6A8MVA2 160 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 ZNF736B4DX44 427 aaPredicted RBP1.69□□□□□ -2.14
SREK1-208ENST00000520580 F8W036 122 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 RNASE3P12724 160 aaKnown RBP1.69□□□□□ -2.14
SREK1-208ENST00000520580 FAM74A1Q5RGS3 127 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 CIB3Q96Q77 187 aaPredicted RBP1.69□□□□□ -2.14
SREK1-208ENST00000520580 MPC1Q9Y5U8 109 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 DAPK1P53355 1430 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 ABCA2Q9BZC7 2435 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 CD163L1Q9NR16 1453 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 NINQ8N4C6 2090 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 PLXNA4Q9HCM2 1894 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 NRXN2Q9P2S2 1712 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 DMXL2Q8TDJ6 3036 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 BBIP1A8MTZ0 92 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 C10orf55Q5SWW7 151 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 MIC13Q5XKP0 118 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 CDC42SE1Q9NRR8 79 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 TMEM106BQ9NUM4 274 aa1.69□□□□□ -2.14
SREK1-208ENST00000520580 SPG11Q96JI7 2443 aa1.68□□□□□ -2.14
SREK1-208ENST00000520580 A6NN06 94 aa1.68□□□□□ -2.14
SREK1-208ENST00000520580 DNAL4O96015 105 aa1.68□□□□□ -2.14
SREK1-208ENST00000520580 GNG8Q9UK08 70 aa1.68□□□□□ -2.14
SREK1-208ENST00000520580 KLK9Q9UKQ9 250 aa1.68□□□□□ -2.14
SREK1-208ENST00000520580 NBEAL1Q6ZS30 2694 aa1.68□□□□□ -2.14
SREK1-208ENST00000520580 PCNX1Q96RV3 2341 aa1.68□□□□□ -2.14
SREK1-208ENST00000520580 FAM208AQ9UK61 1670 aaKnown RBP1.68□□□□□ -2.14
SREK1-208ENST00000520580 TLN1Q9Y490 2541 aaKnown RBP1.68□□□□□ -2.14
SREK1-208ENST00000520580 PNMA8CA0A1B0GUJ8 204 aa1.67□□□□□ -2.14
SREK1-208ENST00000520580 PITX3O75364 302 aa1.67□□□□□ -2.14
SREK1-208ENST00000520580 HYPMO75409 117 aa1.67□□□□□ -2.14
SREK1-208ENST00000520580 PLGLB1Q02325 96 aa1.67□□□□□ -2.14
SREK1-208ENST00000520580 CCSMST1Q4G0I0 132 aa1.67□□□□□ -2.14
SREK1-208ENST00000520580 KRTAP26-1Q6PEX3 210 aa1.67□□□□□ -2.14
SREK1-208ENST00000520580 Q8N2B8 174 aa1.67□□□□□ -2.14
SREK1-208ENST00000520580 PDCD10Q9BUL8 212 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms