RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 TMEM141Q96I45 108 aa6.16□□□□□ -1.42
HMGB4-203ENST00000519684 XCL2Q9UBD3 114 aa6.16□□□□□ -1.42
HMGB4-203ENST00000519684 RIPPLY3P57055 190 aa6.16□□□□□ -1.42
HMGB4-203ENST00000519684 MORN3Q6PF18 240 aaPredicted RBP6.16□□□□□ -1.42
HMGB4-203ENST00000519684 PCP2Q8IVA1 136 aa6.16□□□□□ -1.42
HMGB4-203ENST00000519684 NBPF19A0A087WUL8 3843 aa6.15□□□□□ -1.42
HMGB4-203ENST00000519684 IGHV3-73A0A0B4J1V6 119 aa6.15□□□□□ -1.42
HMGB4-203ENST00000519684 I3L3M4 83 aa6.15□□□□□ -1.42
HMGB4-203ENST00000519684 RHODO00212 210 aa6.15□□□□□ -1.42
HMGB4-203ENST00000519684 EDA2RQ9HAV5 297 aa6.15□□□□□ -1.42
HMGB4-203ENST00000519684 IGHV3OR16-12A0A075B7B8 117 aa6.15□□□□□ -1.43
HMGB4-203ENST00000519684 PRM2P04554 102 aa6.15□□□□□ -1.43
HMGB4-203ENST00000519684 HSD52Q0P140 79 aa6.15□□□□□ -1.43
HMGB4-203ENST00000519684 NDUFA11Q86Y39 141 aa6.15□□□□□ -1.43
HMGB4-203ENST00000519684 DEFB104AQ8WTQ1 72 aa6.15□□□□□ -1.43
HMGB4-203ENST00000519684 TIMM17AQ99595 171 aa6.15□□□□□ -1.43
HMGB4-203ENST00000519684 TNFRSF18Q9Y5U5 241 aa6.15□□□□□ -1.43
HMGB4-203ENST00000519684 ZNF469Q96JG9 3925 aaPredicted RBP6.15□□□□□ -1.43
HMGB4-203ENST00000519684 IGKV2D-26A0A0A0MRZ7 120 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 PRSS29PA6NIE9 313 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 ADARB2-AS1A8MUL3 147 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 IGLV1-51P01701 117 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 PF4P02776 101 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 C11orf72Q8NBR9 251 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 MRPL16Q9NX20 251 aaKnown RBP6.14□□□□□ -1.43
HMGB4-203ENST00000519684 COX11Q9Y6N1 276 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 CCDC168Q8NDH2 2452 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 IGIPA6NJ69 53 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 TSHBP01222 138 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 RPL39P62891 51 aaKnown RBP6.14□□□□□ -1.43
HMGB4-203ENST00000519684 SEC11AP67812 179 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 PMVKQ15126 192 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 PAPPA-AS1Q5QFB9 102 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 CFAP126Q5VTH2 177 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 ORAOV1Q8WV07 137 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 FAM110AQ9BQ89 295 aa6.14□□□□□ -1.43
HMGB4-203ENST00000519684 TLN2Q9Y4G6 2542 aa6.13□□□□□ -1.43
HMGB4-203ENST00000519684 A6NDN8 102 aa6.13□□□□□ -1.43
HMGB4-203ENST00000519684 GAGE1Q13065 139 aa6.13□□□□□ -1.43
HMGB4-203ENST00000519684 SONP18583 2426 aaKnown RBP6.13□□□□□ -1.43
HMGB4-203ENST00000519684 TRAV8-6A0A0B4J262 113 aa6.13□□□□□ -1.43
HMGB4-203ENST00000519684 BEAN1Q3B7T3 259 aa6.13□□□□□ -1.43
HMGB4-203ENST00000519684 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
HMGB4-203ENST00000519684 C1orf158Q8N1D5 194 aa6.13□□□□□ -1.43
HMGB4-203ENST00000519684 OR11H2Q8NH07 326 aa6.13□□□□□ -1.43
HMGB4-203ENST00000519684 HIGD1BQ9P298 99 aa6.13□□□□□ -1.43
HMGB4-203ENST00000519684 INAFM1C9JVW0 142 aa6.12□□□□□ -1.43
HMGB4-203ENST00000519684 RS1O15537 224 aa6.12□□□□□ -1.43
HMGB4-203ENST00000519684 HERVK_113P61574 105 aa6.12□□□□□ -1.43
HMGB4-203ENST00000519684 C1QTNF4Q9BXJ3 329 aa6.12□□□□□ -1.43
HMGB4-203ENST00000519684 CST9LQ9H4G1 147 aa6.12□□□□□ -1.43
HMGB4-203ENST00000519684 MYO9AB2RTY4 2548 aa6.12□□□□□ -1.43
HMGB4-203ENST00000519684 P0DMU3 169 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 FAM231AP0DMU4 169 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 FAM231CP0DMU5 169 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 AZU1P20160 251 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 C20orf203Q8NBC4 194 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 DNAJC30Q96LL9 226 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 CHAC1Q9BUX1 264 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 UNC79Q9P2D8 2635 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 SORL1Q92673 2214 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 HELZ2Q9BYK8 2649 aaKnown RBP6.11□□□□□ -1.43
HMGB4-203ENST00000519684 TRBV25-1A0A075B6N4 114 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 TRGV1A0A0A0MS02 117 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 IGHV3-53P01767 116 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 RPL35AP18077 110 aaKnown RBP6.11□□□□□ -1.43
HMGB4-203ENST00000519684 OR4C5Q8NGB2 326 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 TMEM263Q8WUH6 116 aaKnown RBP6.11□□□□□ -1.43
HMGB4-203ENST00000519684 TTTY13Q9BZ97 58 aa6.11□□□□□ -1.43
HMGB4-203ENST00000519684 E9PLD3 99 aa6.1□□□□□ -1.43
HMGB4-203ENST00000519684 TAX1BP3O14907 124 aa6.1□□□□□ -1.43
HMGB4-203ENST00000519684 KRTAP10-3P60369 221 aa6.1□□□□□ -1.43
HMGB4-203ENST00000519684 Q6ZVH6 145 aa6.1□□□□□ -1.43
HMGB4-203ENST00000519684 IL17DQ8TAD2 202 aa6.1□□□□□ -1.43
HMGB4-203ENST00000519684 RNASE8Q8TDE3 154 aaKnown RBP6.1□□□□□ -1.43
HMGB4-203ENST00000519684 CITED1Q99966 193 aa6.1□□□□□ -1.43
HMGB4-203ENST00000519684 AKAP9Q99996 3911 aa6.1□□□□□ -1.43
HMGB4-203ENST00000519684 ITPR2Q14571 2701 aa6.1□□□□□ -1.43
HMGB4-203ENST00000519684 IGLV4-69A0A075B6H9 119 aa6.1□□□□□ -1.43
HMGB4-203ENST00000519684 C11orf86A6NJI1 115 aa6.1□□□□□ -1.43
HMGB4-203ENST00000519684 WFDC10AQ9H1F0 79 aa6.1□□□□□ -1.43
HMGB4-203ENST00000519684 MYMXA0A1B0GTQ4 84 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 GCSHP23434 173 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 EMP1P54849 157 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 VAMP3Q15836 100 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 Q6ZSN1 163 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 MAPKAPK5-AS1Q8N8E1 139 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 LINC00482Q8N8I6 264 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 C16orf74Q96GX8 76 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 PRADC1Q9BSG0 188 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 C19orf73Q9NVV2 129 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 NPSP0C0P6 89 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 TMEM170BQ5T4T1 132 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 VCX2Q9H322 139 aa6.09□□□□□ -1.43
HMGB4-203ENST00000519684 GCN1Q92616 2671 aaKnown RBP6.08□□□□□ -1.44
HMGB4-203ENST00000519684 TRAV4A0A0B4J268 109 aa6.08□□□□□ -1.44
HMGB4-203ENST00000519684 H3BRM9 83 aa6.08□□□□□ -1.44
HMGB4-203ENST00000519684 PTTG1IPP53801 180 aa6.08□□□□□ -1.44
HMGB4-203ENST00000519684 TAL2Q16559 108 aa6.08□□□□□ -1.44
HMGB4-203ENST00000519684 PYGO1Q9Y3Y4 419 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms