RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CHCHD1Q96BP2 118 aaKnown RBP3.48□□□□□ -1.85
CTNNA1-212ENST00000518919 C14orf144Q96I85 54 aa3.48□□□□□ -1.85
CTNNA1-212ENST00000518919 C20orf144Q9BQM9 153 aa3.48□□□□□ -1.85
CTNNA1-212ENST00000518919 TMEM191AQ9H0A3 160 aa3.48□□□□□ -1.85
CTNNA1-212ENST00000518919 DHRS4-AS1Q9P1J3 65 aa3.48□□□□□ -1.85
CTNNA1-212ENST00000518919 LENEPQ9Y5L5 61 aa3.48□□□□□ -1.85
CTNNA1-212ENST00000518919 A0A096LNJ9 63 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 H3BVH4 76 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 LGALS9O00182 355 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 GAS8-AS1O95177 125 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 SYNJ2BPP57105 145 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 DEFB136Q30KP8 78 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 TMEM86BQ8N661 226 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 OR10J6PQ8NGY7 276 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 LINC00477Q96M19 166 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 PRELID3AQ96N28 172 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 VAMP8Q9BV40 100 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 MS4A6AQ9H2W1 248 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 TEX15Q9BXT5 2789 aa3.47□□□□□ -1.85
CTNNA1-212ENST00000518919 MTORP42345 2549 aa3.46□□□□□ -1.85
CTNNA1-212ENST00000518919 ITPR2Q14571 2701 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 TRAV21A0A0B4J279 112 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 KLLNB2CW77 178 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 CD5LO43866 347 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 OR5AL1P0C617 328 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 ZNF688P0C7X2 276 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 LINC00614P0C842 121 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 GATA1P15976 413 aaPredicted RBP3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 RAB4AP20338 218 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 IFI27P40305 119 aaPredicted RBP3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 RPL32P62910 135 aaKnown RBP3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 DEFA6Q01524 100 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 SAMD13Q5VXD3 122 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 FA2HQ7L5A8 372 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 ATOH7Q8N100 152 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 ORMDL3Q8N138 153 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 C4orf3Q8WVX3 66 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 UBE2E2Q96LR5 201 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 ODF3Q96PU9 254 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 ACANP16112 2415 aa3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 FASNP49327 2511 aaKnown RBP3.46□□□□□ -1.86
CTNNA1-212ENST00000518919 HECTD1Q9ULT8 2610 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 IGLV2-18A0A075B6J9 118 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 A0A0J9YX75 114 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 LOC389332A0A1B0GUA5 103 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 LINC01546A6NGU7 62 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 LINC01619G3V211 115 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 SYS1-DBNDD2H3BUS1 97 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 CRXO43186 299 aaPredicted RBP3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 RNASE3P12724 160 aaKnown RBP3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 EVI2AP22794 236 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 CKS2P33552 79 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 RNASE4P34096 147 aaKnown RBP3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 TFPI2P48307 235 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 CACNG7P62955 275 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 SPATA45Q537H7 98 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 PSMG4Q5JS54 123 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 FOXC2Q99958 501 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 TMEM70Q9BUB7 260 aa3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 TIMM8BQ9Y5J9 83 aaPredicted RBP3.45□□□□□ -1.86
CTNNA1-212ENST00000518919 TRAV26-2A0A0B4J265 109 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 C7orf71A4D174 169 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 RBMY1BA6NDE4 496 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 RBMY1EA6NEQ0 496 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 A8MTW9 85 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 LEPROTL1O95214 131 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 PPBPP02775 128 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 RBMY1DP0C7P1 496 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 IGLC3P0DOY3 106 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 ASIPP42127 132 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 FXYD7P58549 80 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 LINC01545Q5VT33 79 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 AMTNQ6UX39 209 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 TEX29Q8N6K0 151 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 KLHL30-AS1Q8NEE0 82 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 OR2K2Q8NGT1 345 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 RASL10AQ92737 203 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 MIEN1Q9BRT3 115 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 C2orf88Q9BSF0 95 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 SNHG12Q9BXW3 62 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 MAP1LC3AQ9H492 121 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 MDFICQ9P1T7 246 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 TP73-AS1Q9UF72 201 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 HSPB8Q9UJY1 196 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 LAMTOR2Q9Y2Q5 125 aa3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 CSDC2Q9Y534 153 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-212ENST00000518919 GCN1Q92616 2671 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 TRAV12-2A0A075B6T6 113 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 TRAV2A0A0B4J234 112 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 A0A1B0GWB2 263 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 C20orf202A1L168 122 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 OR4C46A6NHA9 309 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 KNCNA6PVL3 124 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 M0R381 172 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 GNRH2O43555 120 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 TCF21O43680 179 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 DUSP14O95147 198 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 HBDP02042 147 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 RBMY1A1P0DJD3 496 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms