RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 ZFP2Q6ZN57 461 aa12.02□□□□□ -0.49
PCM1-206ENST00000518537 SPATA3Q8NHX4 192 aa12.02□□□□□ -0.49
PCM1-206ENST00000518537 RNASE8Q8TDE3 154 aaKnown RBP12.02□□□□□ -0.49
PCM1-206ENST00000518537 TMEM263Q8WUH6 116 aaKnown RBP12.02□□□□□ -0.49
PCM1-206ENST00000518537 EDA2RQ9HAV5 297 aa12.02□□□□□ -0.49
PCM1-206ENST00000518537 C2CD3Q4AC94 2353 aa12.01□□□□□ -0.49
PCM1-206ENST00000518537 RS1O15537 224 aa12.01□□□□□ -0.49
PCM1-206ENST00000518537 IL17DQ8TAD2 202 aa12.01□□□□□ -0.49
PCM1-206ENST00000518537 DEFB104AQ8WTQ1 72 aa12.01□□□□□ -0.49
PCM1-206ENST00000518537 CYSLTR1Q9Y271 337 aa12.01□□□□□ -0.49
PCM1-206ENST00000518537 TRGV1A0A0A0MS02 117 aa12□□□□□ -0.49
PCM1-206ENST00000518537 M0R143 59 aa12□□□□□ -0.49
PCM1-206ENST00000518537 CTAG1AP78358 180 aa12□□□□□ -0.49
PCM1-206ENST00000518537 LINC01549A6NIU2 74 aa11.99□□□□□ -0.49
PCM1-206ENST00000518537 TP53TG1Q9Y2A0 90 aa11.99□□□□□ -0.49
PCM1-206ENST00000518537 I3L3M4 83 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 IGKCP01834 107 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 P0DMU3 169 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 FAM231AP0DMU4 169 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 FAM231CP0DMU5 169 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 ERASQ7Z444 233 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 CSNK1G2-AS1Q8NCQ2 148 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 C16orf74Q96GX8 76 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 ZMAT4Q9H898 229 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 TNFRSF18Q9Y5U5 241 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 A0A087WX48 190 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 EREGO14944 169 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 DPM2O94777 84 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 RIPPLY3P57055 190 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 SLC25A34Q6PIV7 304 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 MRPL52Q86TS9 123 aaKnown RBP11.98□□□□□ -0.49
PCM1-206ENST00000518537 STPG4Q8N801 248 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 SNHG12Q9BXW3 62 aa11.98□□□□□ -0.49
PCM1-206ENST00000518537 TRAV12-1A0A0B4J245 112 aa11.97□□□□□ -0.49
PCM1-206ENST00000518537 CYSRT1A8MQ03 144 aa11.97□□□□□ -0.49
PCM1-206ENST00000518537 RHOHQ15669 191 aa11.97□□□□□ -0.49
PCM1-206ENST00000518537 ANKRD39Q53RE8 183 aa11.97□□□□□ -0.49
PCM1-206ENST00000518537 Q6ZSN1 163 aa11.97□□□□□ -0.49
PCM1-206ENST00000518537 OR4C5Q8NGB2 326 aa11.97□□□□□ -0.49
PCM1-206ENST00000518537 NACAE9PAV3 2078 aa11.97□□□□□ -0.49
PCM1-206ENST00000518537 RRN3P1Q2M238 152 aa11.96□□□□□ -0.49
PCM1-206ENST00000518537 MRPL35Q9NZE8 188 aaKnown RBP11.96□□□□□ -0.49
PCM1-206ENST00000518537 TSHBP01222 138 aa11.96□□□□□ -0.5
PCM1-206ENST00000518537 IGHV3-53P01767 116 aa11.96□□□□□ -0.5
PCM1-206ENST00000518537 LBHQ53QV2 105 aaPredicted RBP11.96□□□□□ -0.5
PCM1-206ENST00000518537 NOP10Q9NPE3 64 aaKnown RBP11.96□□□□□ -0.5
PCM1-206ENST00000518537 Q6ZTI0 123 aa11.95□□□□□ -0.5
PCM1-206ENST00000518537 BAALCQ8WXS3 180 aa11.95□□□□□ -0.5
PCM1-206ENST00000518537 COX8AP10176 69 aa11.95□□□□□ -0.5
PCM1-206ENST00000518537 RPL39P62891 51 aaKnown RBP11.95□□□□□ -0.5
PCM1-206ENST00000518537 DAZ2Q13117 558 aaKnown RBP11.95□□□□□ -0.5
PCM1-206ENST00000518537 NEXN-AS1Q8NBZ9 246 aa11.95□□□□□ -0.5
PCM1-206ENST00000518537 MRPS16Q9Y3D3 137 aaKnown RBP11.95□□□□□ -0.5
PCM1-206ENST00000518537 CHTOPQ9Y3Y2 248 aaKnown RBP11.95□□□□□ -0.5
PCM1-206ENST00000518537 TCTAP57738 103 aa11.94□□□□□ -0.5
PCM1-206ENST00000518537 DNAJC30Q96LL9 226 aa11.94□□□□□ -0.5
PCM1-206ENST00000518537 TMEM141Q96I45 108 aa11.94□□□□□ -0.5
PCM1-206ENST00000518537 C2orf88Q9BSF0 95 aa11.94□□□□□ -0.5
PCM1-206ENST00000518537 TP73-AS1Q9UF72 201 aa11.94□□□□□ -0.5
PCM1-206ENST00000518537 F8VRH5 84 aa11.93□□□□□ -0.5
PCM1-206ENST00000518537 PLNP26678 52 aa11.93□□□□□ -0.5
PCM1-206ENST00000518537 TRAV4A0A0B4J268 109 aa11.92□□□□□ -0.5
PCM1-206ENST00000518537 PLAC8L1A1L4L8 177 aa11.92□□□□□ -0.5
PCM1-206ENST00000518537 IGIPA6NJ69 53 aa11.92□□□□□ -0.5
PCM1-206ENST00000518537 BATFQ16520 125 aa11.92□□□□□ -0.5
PCM1-206ENST00000518537 WFDC9Q8NEX5 89 aa11.92□□□□□ -0.5
PCM1-206ENST00000518537 ZNF479Q96JC4 524 aa11.92□□□□□ -0.5
PCM1-206ENST00000518537 TIMM17AQ99595 171 aa11.92□□□□□ -0.5
PCM1-206ENST00000518537 HHLA3Q9XRX5 114 aa11.92□□□□□ -0.5
PCM1-206ENST00000518537 KRTAP24-1Q3LI83 254 aa11.92□□□□□ -0.5
PCM1-206ENST00000518537 Q9UF83 564 aa11.92□□□□□ -0.5
PCM1-206ENST00000518537 PRSS29PA6NIE9 313 aa11.91□□□□□ -0.5
PCM1-206ENST00000518537 C20orf203Q8NBC4 194 aa11.91□□□□□ -0.5
PCM1-206ENST00000518537 F8P00451 2351 aa11.91□□□□□ -0.5
PCM1-206ENST00000518537 NMUP48645 174 aa11.91□□□□□ -0.5
PCM1-206ENST00000518537 ZC2HC1BQ5TFG8 222 aa11.91□□□□□ -0.5
PCM1-206ENST00000518537 OVOL2Q9BRP0 275 aa11.91□□□□□ -0.5
PCM1-206ENST00000518537 NIPBLQ6KC79 2804 aaeCLIP11.9□□□□□ -0.5
PCM1-206ENST00000518537 GAGE12BA1L429 117 aa11.9□□□□□ -0.5
PCM1-206ENST00000518537 GAGE7O76087 117 aa11.9□□□□□ -0.5
PCM1-206ENST00000518537 GAGE12FP0CL80 117 aa11.9□□□□□ -0.5
PCM1-206ENST00000518537 GAGE12GP0CL81 117 aa11.9□□□□□ -0.5
PCM1-206ENST00000518537 GAGE12IP0CL82 117 aa11.9□□□□□ -0.5
PCM1-206ENST00000518537 TRGV2A0A075B6R0 118 aa11.89□□□□□ -0.51
PCM1-206ENST00000518537 PMVKQ15126 192 aa11.89□□□□□ -0.51
PCM1-206ENST00000518537 MAST4O15021 2626 aa11.88□□□□□ -0.51
PCM1-206ENST00000518537 K7EQD1 137 aa11.88□□□□□ -0.51
PCM1-206ENST00000518537 FGF6P10767 208 aa11.88□□□□□ -0.51
PCM1-206ENST00000518537 PHLDA1Q8WV24 401 aaPredicted RBP11.88□□□□□ -0.51
PCM1-206ENST00000518537 HINT1P49773 126 aaPredicted RBP11.87□□□□□ -0.51
PCM1-206ENST00000518537 BOD1L2Q8IYS8 172 aa11.87□□□□□ -0.51
PCM1-206ENST00000518537 ZNRF2Q8NHG8 242 aa11.87□□□□□ -0.51
PCM1-206ENST00000518537 IGHV3-38A0A0C4DH36 116 aa11.86□□□□□ -0.51
PCM1-206ENST00000518537 EMP1P54849 157 aa11.86□□□□□ -0.51
PCM1-206ENST00000518537 COTL1Q14019 142 aa11.86□□□□□ -0.51
PCM1-206ENST00000518537 CST9LQ9H4G1 147 aa11.86□□□□□ -0.51
PCM1-206ENST00000518537 JMJD1CQ15652 2540 aa11.86□□□□□ -0.51
PCM1-206ENST00000518537 IGKV2D-26A0A0A0MRZ7 120 aa11.86□□□□□ -0.51
PCM1-206ENST00000518537 TRBV10-1A0A0K0K1A3 114 aa11.86□□□□□ -0.51
PCM1-206ENST00000518537 CIDEAO60543 219 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms