RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 FAM74A4Q5TZK3 123 aa12.66□□□□□ -0.38
TFF3-204ENST00000518498 JPT2Q9H910 190 aa12.66□□□□□ -0.38
TFF3-204ENST00000518498 KIF25-AS1Q9Y6Z4 181 aa12.66□□□□□ -0.38
TFF3-204ENST00000518498 A0A087WWL8 130 aa12.65□□□□□ -0.38
TFF3-204ENST00000518498 C16orf90A8MZG2 172 aa12.65□□□□□ -0.38
TFF3-204ENST00000518498 APCSP02743 223 aa12.65□□□□□ -0.38
TFF3-204ENST00000518498 TNP2Q05952 138 aa12.65□□□□□ -0.38
TFF3-204ENST00000518498 MRPL18Q9H0U6 180 aaKnown RBP12.65□□□□□ -0.38
TFF3-204ENST00000518498 DNAH11Q96DT5 4516 aa12.65□□□□□ -0.39
TFF3-204ENST00000518498 PPBPP02775 128 aa12.64□□□□□ -0.39
TFF3-204ENST00000518498 MGPP08493 103 aa12.64□□□□□ -0.39
TFF3-204ENST00000518498 AMN1Q8IY45 258 aa12.64□□□□□ -0.39
TFF3-204ENST00000518498 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.64□□□□□ -0.39
TFF3-204ENST00000518498 MRAP2Q96G30 205 aa12.64□□□□□ -0.39
TFF3-204ENST00000518498 NBDYA0A0U1RRE5 68 aa12.63□□□□□ -0.39
TFF3-204ENST00000518498 F5H697 171 aa12.63□□□□□ -0.39
TFF3-204ENST00000518498 F5H768 121 aa12.63□□□□□ -0.39
TFF3-204ENST00000518498 H7C1H1 209 aa12.63□□□□□ -0.39
TFF3-204ENST00000518498 RAB4AP20338 218 aa12.63□□□□□ -0.39
TFF3-204ENST00000518498 FABP9Q0Z7S8 132 aa12.63□□□□□ -0.39
TFF3-204ENST00000518498 ZNF56Q15929 161 aa12.63□□□□□ -0.39
TFF3-204ENST00000518498 UFSP1Q6NVU6 142 aa12.63□□□□□ -0.39
TFF3-204ENST00000518498 C6orf223Q8N319 242 aa12.63□□□□□ -0.39
TFF3-204ENST00000518498 SAMD10Q9BYL1 202 aa12.63□□□□□ -0.39
TFF3-204ENST00000518498 CDK2AP2O75956 126 aa12.62□□□□□ -0.39
TFF3-204ENST00000518498 NUDT3O95989 172 aa12.62□□□□□ -0.39
TFF3-204ENST00000518498 PPP1R17O96001 155 aa12.62□□□□□ -0.39
TFF3-204ENST00000518498 ATP5G1P05496 136 aa12.62□□□□□ -0.39
TFF3-204ENST00000518498 LINC00315P59091 139 aa12.62□□□□□ -0.39
TFF3-204ENST00000518498 SLAQ13239 276 aa12.62□□□□□ -0.39
TFF3-204ENST00000518498 ZNRF2Q8NHG8 242 aa12.62□□□□□ -0.39
TFF3-204ENST00000518498 RNF185Q96GF1 192 aa12.62□□□□□ -0.39
TFF3-204ENST00000518498 TRGV4A0A0C4DH28 118 aa12.61□□□□□ -0.39
TFF3-204ENST00000518498 CCL18P55774 89 aa12.61□□□□□ -0.39
TFF3-204ENST00000518498 MRPL51Q4U2R6 128 aaKnown RBP12.61□□□□□ -0.39
TFF3-204ENST00000518498 ZNF479Q96JC4 524 aa12.61□□□□□ -0.39
TFF3-204ENST00000518498 IGHV3-53P01767 116 aa12.6□□□□□ -0.39
TFF3-204ENST00000518498 CKS2P33552 79 aa12.6□□□□□ -0.39
TFF3-204ENST00000518498 ORMDL3Q8N138 153 aa12.6□□□□□ -0.39
TFF3-204ENST00000518498 MAPKAPK5-AS1Q8N8E1 139 aa12.6□□□□□ -0.39
TFF3-204ENST00000518498 LAMTOR2Q9Y2Q5 125 aa12.6□□□□□ -0.39
TFF3-204ENST00000518498 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
TFF3-204ENST00000518498 TRGC2P03986 189 aa12.59□□□□□ -0.39
TFF3-204ENST00000518498 ABCA13Q86UQ4 5058 aa12.58□□□□□ -0.39
TFF3-204ENST00000518498 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.4
TFF3-204ENST00000518498 SUMO4Q6EEV6 95 aa12.58□□□□□ -0.4
TFF3-204ENST00000518498 LINC00588Q9Y4M8 146 aa12.58□□□□□ -0.4
TFF3-204ENST00000518498 TRBV6-4A0A1B0GX49 114 aa12.57□□□□□ -0.4
TFF3-204ENST00000518498 D6R8Y8 96 aa12.57□□□□□ -0.4
TFF3-204ENST00000518498 PHOX2AO14813 284 aa12.57□□□□□ -0.4
TFF3-204ENST00000518498 FHL2Q14192 279 aa12.57□□□□□ -0.4
TFF3-204ENST00000518498 TRBV10-1A0A0K0K1A3 114 aa12.56□□□□□ -0.4
TFF3-204ENST00000518498 C1orf196B1AJZ1 125 aa12.56□□□□□ -0.4
TFF3-204ENST00000518498 K7EQD1 137 aa12.56□□□□□ -0.4
TFF3-204ENST00000518498 M0QY20 66 aa12.56□□□□□ -0.4
TFF3-204ENST00000518498 RHOHQ15669 191 aa12.56□□□□□ -0.4
TFF3-204ENST00000518498 KIAA1644Q3SXP7 199 aa12.56□□□□□ -0.4
TFF3-204ENST00000518498 PRELID3AQ96N28 172 aa12.56□□□□□ -0.4
TFF3-204ENST00000518498 PRADC1Q9BSG0 188 aa12.56□□□□□ -0.4
TFF3-204ENST00000518498 PRO0255Q9UI72 69 aa12.56□□□□□ -0.4
TFF3-204ENST00000518498 DNAJC30Q96LL9 226 aa12.55□□□□□ -0.4
TFF3-204ENST00000518498 HHLA3Q9XRX5 114 aa12.55□□□□□ -0.4
TFF3-204ENST00000518498 TRAV26-2A0A0B4J265 109 aa12.54□□□□□ -0.4
TFF3-204ENST00000518498 SRIP30626 198 aa12.54□□□□□ -0.4
TFF3-204ENST00000518498 OR10J3Q5JRS4 329 aa12.54□□□□□ -0.4
TFF3-204ENST00000518498 ALKBH7Q9BT30 221 aaPredicted RBP12.54□□□□□ -0.4
TFF3-204ENST00000518498 Q9H8V8 135 aa12.54□□□□□ -0.4
TFF3-204ENST00000518498 NIT2Q9NQR4 276 aa12.54□□□□□ -0.4
TFF3-204ENST00000518498 NCR2O95944 276 aa12.53□□□□□ -0.4
TFF3-204ENST00000518498 SLC25A29Q8N8R3 303 aa12.53□□□□□ -0.4
TFF3-204ENST00000518498 TRBV6-5A0A0K0K1A5 114 aa12.52□□□□□ -0.41
TFF3-204ENST00000518498 SMKR1H3BMG3 65 aa12.52□□□□□ -0.41
TFF3-204ENST00000518498 TNFRSF6BO95407 300 aa12.52□□□□□ -0.41
TFF3-204ENST00000518498 HOXA5P20719 270 aa12.52□□□□□ -0.41
TFF3-204ENST00000518498 CRYBA4P53673 196 aa12.52□□□□□ -0.41
TFF3-204ENST00000518498 RAB5BP61020 215 aa12.52□□□□□ -0.41
TFF3-204ENST00000518498 RPL36AP83881 106 aaKnown RBP12.52□□□□□ -0.41
TFF3-204ENST00000518498 Q6ZSN1 163 aa12.52□□□□□ -0.41
TFF3-204ENST00000518498 SPATA12Q7Z6I5 190 aa12.52□□□□□ -0.41
TFF3-204ENST00000518498 Q8N1X5 172 aa12.52□□□□□ -0.41
TFF3-204ENST00000518498 RPL36ALQ969Q0 106 aaKnown RBP12.52□□□□□ -0.41
TFF3-204ENST00000518498 C20orf78Q9BR46 151 aa12.52□□□□□ -0.41
TFF3-204ENST00000518498 TNFRSF18Q9Y5U5 241 aa12.52□□□□□ -0.41
TFF3-204ENST00000518498 PAX4O43316 350 aa12.51□□□□□ -0.41
TFF3-204ENST00000518498 NRACQ8N912 160 aa12.51□□□□□ -0.41
TFF3-204ENST00000518498 MAP1LC3AQ9H492 121 aa12.51□□□□□ -0.41
TFF3-204ENST00000518498 ST20Q9HBF5 79 aa12.51□□□□□ -0.41
TFF3-204ENST00000518498 H3BNG1 76 aa12.5□□□□□ -0.41
TFF3-204ENST00000518498 NPYP01303 97 aa12.5□□□□□ -0.41
TFF3-204ENST00000518498 TRBV7-3A0A075B6L6 115 aa12.49□□□□□ -0.41
TFF3-204ENST00000518498 PRSS47A8MTI9 375 aa12.49□□□□□ -0.41
TFF3-204ENST00000518498 SUMO2P61956 95 aaKnown RBP12.49□□□□□ -0.41
TFF3-204ENST00000518498 RPL32P62910 135 aaKnown RBP12.49□□□□□ -0.41
TFF3-204ENST00000518498 TTC32Q5I0X7 151 aa12.49□□□□□ -0.41
TFF3-204ENST00000518498 NEXN-AS1Q8NBZ9 246 aa12.49□□□□□ -0.41
TFF3-204ENST00000518498 RPL39LQ96EH5 51 aaKnown RBP12.49□□□□□ -0.41
TFF3-204ENST00000518498 HSPG2P98160 4391 aa12.49□□□□□ -0.41
TFF3-204ENST00000518498 TRAV26-1A0A087WT03 109 aa12.48□□□□□ -0.41
TFF3-204ENST00000518498 GAS8-AS1O95177 125 aa12.48□□□□□ -0.41
TFF3-204ENST00000518498 SH2D6Q7Z4S9 175 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms