RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 ST20Q9HBF5 79 aa4.28□□□□□ -1.72
CD47-205ENST00000517766 UQCR10Q9UDW1 63 aa4.28□□□□□ -1.72
CD47-205ENST00000517766 FLNAP21333 2647 aaKnown RBP4.28□□□□□ -1.72
CD47-205ENST00000517766 SORL1Q92673 2214 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 ZANQ9Y493 2812 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 TRAV26-2A0A0B4J265 109 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 TRBV6-5A0A0K0K1A5 114 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 A8MWV9 139 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 H7C1H1 209 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 M0R2P5 195 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 TCAPO15273 167 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 GAS8-AS1O95177 125 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 RBMY1A1P0DJD3 496 aaKnown RBP4.27□□□□□ -1.73
CD47-205ENST00000517766 RBMY1CP0DJD4 496 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 INSL3P51460 131 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 LINC00315P59091 139 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 RBMY1FQ15415 496 aaKnown RBP4.27□□□□□ -1.73
CD47-205ENST00000517766 LBHQ53QV2 105 aaPredicted RBP4.27□□□□□ -1.73
CD47-205ENST00000517766 HIST2H2BDQ6DRA6 164 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 MORN3Q6PF18 240 aaPredicted RBP4.27□□□□□ -1.73
CD47-205ENST00000517766 LINC00173Q6ZV60 143 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 TRPT1Q86TN4 253 aaKnown RBP4.27□□□□□ -1.73
CD47-205ENST00000517766 TMEM158Q8WZ71 300 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 RASL10AQ92737 203 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 C14orf144Q96I85 54 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 EDA2RQ9HAV5 297 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 MDFICQ9P1T7 246 aa4.27□□□□□ -1.73
CD47-205ENST00000517766 VCYO14598 125 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 CRYGDP07320 174 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 IGLC3P0DOY3 106 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 ZNF56Q15929 161 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 ZNF876PQ49A33 203 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 C9orf66Q5T8R8 295 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 ATOH7Q8N100 152 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 RPL39LQ96EH5 51 aaKnown RBP4.26□□□□□ -1.73
CD47-205ENST00000517766 TMEM208Q9BTX3 173 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 C1QTNF4Q9BXJ3 329 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 HIVEP2P31629 2446 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 CENPEQ02224 2701 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 CCDC168Q8NDH2 2452 aa4.26□□□□□ -1.73
CD47-205ENST00000517766 HELZ2Q9BYK8 2649 aaKnown RBP4.25□□□□□ -1.73
CD47-205ENST00000517766 SONP18583 2426 aaKnown RBP4.25□□□□□ -1.73
CD47-205ENST00000517766 ZNF469Q96JG9 3925 aaPredicted RBP4.25□□□□□ -1.73
CD47-205ENST00000517766 NACAE9PAV3 2078 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 WNK1Q9H4A3 2382 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 MXRA5Q9NR99 2828 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 NBPF19A0A087WUL8 3843 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 H0Y8G0 127 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.25□□□□□ -1.73
CD47-205ENST00000517766 M0R143 59 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 PRSS1P07477 247 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 HTN1P15515 57 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 IGLL1P15814 213 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 POLR2KP53803 58 aaKnown RBP4.25□□□□□ -1.73
CD47-205ENST00000517766 KRTAP10-3P60369 221 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 CTAG1AP78358 180 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 SERTAD4-AS1Q5TG53 156 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 FAM74A4Q5TZK3 123 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 TOMM6Q96B49 74 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 KIR2DL4Q99706 377 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 PMCHL2Q9BQD1 86 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 MCRIP2Q9BUT9 160 aaKnown RBP4.25□□□□□ -1.73
CD47-205ENST00000517766 CSTL1Q9H114 145 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 GOLT1BQ9Y3E0 138 aa4.25□□□□□ -1.73
CD47-205ENST00000517766 ANK3Q12955 4377 aaKnown RBP4.25□□□□□ -1.73
CD47-205ENST00000517766 TLN2Q9Y4G6 2542 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 TRAV12-1A0A0B4J245 112 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 TRBV27A0A0K0K1C4 114 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 M0QY20 66 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 HNRNPA3P51991 378 aaKnown RBP4.24□□□□□ -1.73
CD47-205ENST00000517766 RIPPLY3P57055 190 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 KRTAP15-1Q3LI76 137 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 Q6ZN92 141 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 C11orf72Q8NBR9 251 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 DNAJC30Q96LL9 226 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 C18orf15Q96N68 181 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 SCGB3A1Q96QR1 104 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 JPT2Q9H910 190 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 XCL2Q9UBD3 114 aa4.24□□□□□ -1.73
CD47-205ENST00000517766 MAP1AP78559 2803 aaPredicted RBP4.24□□□□□ -1.73
CD47-205ENST00000517766 MYO9AB2RTY4 2548 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 A0A087WX48 190 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 hDV102S1A0JD36 115 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 SDHAF1A6NFY7 115 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 I3L3M4 83 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 RS1O15537 224 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 CIDEAO60543 219 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 IGKCP01834 107 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 RHOHQ15669 191 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 MAJINQ3KP22 176 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 SLC25A34Q6PIV7 304 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 C2orf66Q6UXQ4 117 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 ZFP2Q6ZN57 461 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 ERASQ7Z444 233 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 GTSCR1Q86UQ5 136 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 C1orf158Q8N1D5 194 aa4.23□□□□□ -1.73
CD47-205ENST00000517766 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.23□□□□□ -1.73
CD47-205ENST00000517766 TMEM263Q8WUH6 116 aaKnown RBP4.23□□□□□ -1.73
CD47-205ENST00000517766 C16orf74Q96GX8 76 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms