RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 COLCA2A8K830 154 aa8.35□□□□□ -1.07
PDLIM5-220ENST00000514830 PHOX2AO14813 284 aa8.35□□□□□ -1.07
PDLIM5-220ENST00000514830 NIT2Q9NQR4 276 aa8.35□□□□□ -1.07
PDLIM5-220ENST00000514830 TRBV7-3A0A075B6L6 115 aa8.34□□□□□ -1.07
PDLIM5-220ENST00000514830 MRPL23Q16540 153 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-220ENST00000514830 NEXN-AS1Q8NBZ9 246 aa8.34□□□□□ -1.07
PDLIM5-220ENST00000514830 LAMTOR2Q9Y2Q5 125 aa8.34□□□□□ -1.07
PDLIM5-220ENST00000514830 ICOSQ9Y6W8 199 aa8.34□□□□□ -1.07
PDLIM5-220ENST00000514830 A0A096LPF7 62 aa8.33□□□□□ -1.08
PDLIM5-220ENST00000514830 LCE6AA0A183 80 aa8.33□□□□□ -1.08
PDLIM5-220ENST00000514830 SCO1O75880 301 aa8.33□□□□□ -1.08
PDLIM5-220ENST00000514830 APCSP02743 223 aa8.33□□□□□ -1.08
PDLIM5-220ENST00000514830 GYPEP15421 78 aa8.33□□□□□ -1.08
PDLIM5-220ENST00000514830 TIRAPP58753 221 aa8.33□□□□□ -1.08
PDLIM5-220ENST00000514830 RPL36AP83881 106 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-220ENST00000514830 ORMDL3Q8N138 153 aa8.33□□□□□ -1.08
PDLIM5-220ENST00000514830 NRACQ8N912 160 aa8.33□□□□□ -1.08
PDLIM5-220ENST00000514830 RPL36ALQ969Q0 106 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-220ENST00000514830 APLNQ9ULZ1 77 aa8.33□□□□□ -1.08
PDLIM5-220ENST00000514830 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
PDLIM5-220ENST00000514830 A0A0J9YY99 117 aa8.32□□□□□ -1.08
PDLIM5-220ENST00000514830 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
PDLIM5-220ENST00000514830 IGLL5B9A064 214 aa8.32□□□□□ -1.08
PDLIM5-220ENST00000514830 CKS2P33552 79 aa8.32□□□□□ -1.08
PDLIM5-220ENST00000514830 UBE2D3P61077 147 aa8.32□□□□□ -1.08
PDLIM5-220ENST00000514830 UBE2D2P62837 147 aa8.32□□□□□ -1.08
PDLIM5-220ENST00000514830 RPL32P62910 135 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-220ENST00000514830 C20orf78Q9BR46 151 aa8.32□□□□□ -1.08
PDLIM5-220ENST00000514830 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-220ENST00000514830 Q9UF83 564 aa8.32□□□□□ -1.08
PDLIM5-220ENST00000514830 LOC100131303A0A0U1RQF7 123 aa8.31□□□□□ -1.08
PDLIM5-220ENST00000514830 D6R8Y8 96 aa8.31□□□□□ -1.08
PDLIM5-220ENST00000514830 P0DMU3 169 aa8.31□□□□□ -1.08
PDLIM5-220ENST00000514830 FAM231AP0DMU4 169 aa8.31□□□□□ -1.08
PDLIM5-220ENST00000514830 FAM231CP0DMU5 169 aa8.31□□□□□ -1.08
PDLIM5-220ENST00000514830 RAB5AP20339 215 aa8.31□□□□□ -1.08
PDLIM5-220ENST00000514830 SRIP30626 198 aa8.31□□□□□ -1.08
PDLIM5-220ENST00000514830 RPS10P46783 165 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-220ENST00000514830 TRAPPC1Q9Y5R8 145 aa8.31□□□□□ -1.08
PDLIM5-220ENST00000514830 TNFRSF18Q9Y5U5 241 aa8.31□□□□□ -1.08
PDLIM5-220ENST00000514830 STARD9Q9P2P6 4700 aa8.3□□□□□ -1.08
PDLIM5-220ENST00000514830 GAS8-AS1O95177 125 aa8.3□□□□□ -1.08
PDLIM5-220ENST00000514830 TNFRSF6BO95407 300 aa8.3□□□□□ -1.08
PDLIM5-220ENST00000514830 POLR2KP53803 58 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-220ENST00000514830 OR10J3Q5JRS4 329 aa8.3□□□□□ -1.08
PDLIM5-220ENST00000514830 NEGR1Q7Z3B1 354 aa8.3□□□□□ -1.08
PDLIM5-220ENST00000514830 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-220ENST00000514830 ZNRF2Q8NHG8 242 aa8.3□□□□□ -1.08
PDLIM5-220ENST00000514830 PRELID3AQ96N28 172 aa8.3□□□□□ -1.08
PDLIM5-220ENST00000514830 DAZ3Q9NR90 486 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-220ENST00000514830 TRBV27A0A0K0K1C4 114 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 GAGE12JA6NER3 117 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 SMKR1H3BMG3 65 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 NCR2O95944 276 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 SUMO2P61956 95 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 FABP9Q0Z7S8 132 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 GAGE1Q13065 139 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 GAGE4Q13068 117 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 GAGE5Q13069 117 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 GAGE13Q4V321 117 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 TMEM97Q5BJF2 176 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 ZFAND6Q6FIF0 208 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 ATP6V0E2Q8NHE4 81 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 ALKBH7Q9BT30 221 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 TMEM70Q9BUB7 260 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 ST20Q9HBF5 79 aa8.29□□□□□ -1.08
PDLIM5-220ENST00000514830 SDHAF1A6NFY7 115 aa8.28□□□□□ -1.08
PDLIM5-220ENST00000514830 NUDT3O95989 172 aa8.28□□□□□ -1.08
PDLIM5-220ENST00000514830 NPYP01303 97 aa8.28□□□□□ -1.08
PDLIM5-220ENST00000514830 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-220ENST00000514830 GTSF1LQ9H1H1 148 aa8.28□□□□□ -1.08
PDLIM5-220ENST00000514830 VCYO14598 125 aa8.27□□□□□ -1.09
PDLIM5-220ENST00000514830 TCAPO15273 167 aa8.27□□□□□ -1.09
PDLIM5-220ENST00000514830 LYPD5Q6UWN5 251 aa8.27□□□□□ -1.09
PDLIM5-220ENST00000514830 I3L3M4 83 aa8.26□□□□□ -1.09
PDLIM5-220ENST00000514830 K7EMI3 77 aa8.26□□□□□ -1.09
PDLIM5-220ENST00000514830 KIAA1644Q3SXP7 199 aa8.26□□□□□ -1.09
PDLIM5-220ENST00000514830 SMIM2Q9BVW6 85 aa8.26□□□□□ -1.09
PDLIM5-220ENST00000514830 MAP1LC3AQ9H492 121 aa8.26□□□□□ -1.09
PDLIM5-220ENST00000514830 IGLV2-18A0A075B6J9 118 aa8.25□□□□□ -1.09
PDLIM5-220ENST00000514830 TRGC2P03986 189 aa8.25□□□□□ -1.09
PDLIM5-220ENST00000514830 CCL18P55774 89 aa8.25□□□□□ -1.09
PDLIM5-220ENST00000514830 ESRGQ1W209 222 aa8.25□□□□□ -1.09
PDLIM5-220ENST00000514830 LELP1Q5T871 98 aa8.25□□□□□ -1.09
PDLIM5-220ENST00000514830 UPK3BQ9BT76 320 aa8.25□□□□□ -1.09
PDLIM5-220ENST00000514830 MRPS16Q9Y3D3 137 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-220ENST00000514830 TRBV6-8A0A0A6YYG3 113 aa8.24□□□□□ -1.09
PDLIM5-220ENST00000514830 LINC01546A6NGU7 62 aa8.24□□□□□ -1.09
PDLIM5-220ENST00000514830 PMCHP20382 165 aa8.24□□□□□ -1.09
PDLIM5-220ENST00000514830 COTL1Q14019 142 aa8.24□□□□□ -1.09
PDLIM5-220ENST00000514830 IQCJQ1A5X6 159 aa8.24□□□□□ -1.09
PDLIM5-220ENST00000514830 Q8N8P6 123 aa8.24□□□□□ -1.09
PDLIM5-220ENST00000514830 NXT2Q9NPJ8 142 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-220ENST00000514830 PLECQ15149 4684 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-220ENST00000514830 TSHBP01222 138 aa8.23□□□□□ -1.09
PDLIM5-220ENST00000514830 LGALS9CQ6DKI2 356 aa8.23□□□□□ -1.09
PDLIM5-220ENST00000514830 NTM-AS1Q6ZSK4 140 aa8.23□□□□□ -1.09
PDLIM5-220ENST00000514830 C18orf32Q8TCD1 76 aa8.23□□□□□ -1.09
PDLIM5-220ENST00000514830 KIR2DL4Q99706 377 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms