RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TRGV3P03979 118 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 LY6EQ16553 131 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 USMG5Q96IX5 58 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 MDFICQ9P1T7 246 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 LRBAP50851 2863 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 MYMXA0A1B0GTQ4 84 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 FAM223BA6NKX1 122 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 NCBP2LA6PVI3 153 aaKnown RBP5.51□□□□□ -1.53
CLIP1-205ENST00000514271 DPM2O94777 84 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 MT-ATP8P03928 68 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 ATP5G2Q06055 141 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 FAM223AQ8IWN6 122 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 MRPL35Q9NZE8 188 aaKnown RBP5.51□□□□□ -1.53
CLIP1-205ENST00000514271 CCDC168Q8NDH2 2452 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 CRYBG3Q68DQ2 2970 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 GAGE12JA6NER3 117 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 SMKR1H3BMG3 65 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 GAGE7O76087 117 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 GAGE12FP0CL80 117 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 GAGE12GP0CL81 117 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 GAGE12IP0CL82 117 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 P0DMU3 169 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 FAM231AP0DMU4 169 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 FAM231CP0DMU5 169 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 TSPEAR-AS2P59090 65 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 GAGE4Q13068 117 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 ODF3Q96PU9 254 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 ANAPC13Q9BS18 74 aa5.51□□□□□ -1.53
CLIP1-205ENST00000514271 DNAH1Q9P2D7 4330 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 A0A0J9YY99 117 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 J3QR89 54 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 NDPQ00604 133 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 CFHR3Q02985 330 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 PRR9Q5T870 116 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 C3orf56Q8N813 242 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 DLX4Q92988 240 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-205ENST00000514271 TRAV41A0A0B4J266 112 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 F8VRH5 84 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 M0R3E3 92 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 IGHV3-48P01763 117 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 RPL27AP46776 148 aaKnown RBP5.5□□□□□ -1.53
CLIP1-205ENST00000514271 TMEM263Q8WUH6 116 aaKnown RBP5.5□□□□□ -1.53
CLIP1-205ENST00000514271 RPL7P18124 248 aaKnown RBP5.5□□□□□ -1.53
CLIP1-205ENST00000514271 CD164L2Q6UWJ8 174 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 HIVEP1P15822 2718 aa5.5□□□□□ -1.53
CLIP1-205ENST00000514271 IGHV7-81A0A0B4J1V7 117 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 CFC1BP0CG36 223 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 CFC1P0CG37 223 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 GATA1P15976 413 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-205ENST00000514271 ORM2P19652 201 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 DLX1P56177 255 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 RPL11P62913 178 aaKnown RBP5.49□□□□□ -1.53
CLIP1-205ENST00000514271 FAM19A5Q7Z5A7 132 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-205ENST00000514271 TEN1Q86WV5 123 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 PLEKHB2Q96CS7 222 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 PKIGQ9Y2B9 76 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 SETXQ7Z333 2677 aaKnown RBP5.49□□□□□ -1.53
CLIP1-205ENST00000514271 PRAC2D3DTV9 90 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 BUB3O43684 328 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 IGLV1-40P01703 118 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 LEPP41159 167 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 FXYD7P58549 80 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 SLC25A29Q8N8R3 303 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 UBE2E2Q96LR5 201 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 CYSLTR1Q9Y271 337 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 ZC2HC1BQ5TFG8 222 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 ZFAND6Q6FIF0 208 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 ZFP2Q6ZN57 461 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 C20orf173Q96LM9 149 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 AGPAT4-IT1Q9H0P7 198 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 LENEPQ9Y5L5 61 aa5.49□□□□□ -1.53
CLIP1-205ENST00000514271 H3BTX0 84 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 POLR2KP53803 58 aaKnown RBP5.48□□□□□ -1.53
CLIP1-205ENST00000514271 BEAN1Q3B7T3 259 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 Q6ZQT7 251 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 TMEM219Q86XT9 240 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 OR8A1Q8NGG7 326 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 PRSS3P2Q8NHM4 247 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 NACAE9PAV3 2078 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 TCL1BO95988 128 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 RPL24P83731 157 aaKnown RBP5.48□□□□□ -1.53
CLIP1-205ENST00000514271 GAGE13Q4V321 117 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 ZNRF2Q8NHG8 242 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 C4orf3Q8WVX3 66 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 PLXNB1O43157 2135 aa5.48□□□□□ -1.53
CLIP1-205ENST00000514271 IGHV3-72A0A0B4J1Y9 119 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 A0A1B0GX51 115 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 PPIFP30405 207 aaKnown RBP5.47□□□□□ -1.53
CLIP1-205ENST00000514271 ETDBQ3ZM63 59 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 LINC01561Q8N1V8 128 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 ZFAND2AQ8N6M9 145 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 HIST1H4AP62805 103 aaKnown RBP5.47□□□□□ -1.53
CLIP1-205ENST00000514271 RPS28P62857 69 aaKnown RBP5.47□□□□□ -1.53
CLIP1-205ENST00000514271 LAGE3Q14657 143 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 GTSCR1Q86UQ5 136 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 TEX15Q9BXT5 2789 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 WNK2Q9Y3S1 2297 aa5.47□□□□□ -1.53
CLIP1-205ENST00000514271 IGKV2-40A0A087WW87 121 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-205ENST00000514271 TRBV6-5A0A0K0K1A5 114 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms