RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 IGHV3-33P01772 117 aa7.26□□□□□ -1.25
VCAN-210ENST00000513960 ZNRF2Q8NHG8 242 aa7.26□□□□□ -1.25
VCAN-210ENST00000513960 ZNF580Q9UK33 172 aa7.26□□□□□ -1.25
VCAN-210ENST00000513960 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.25□□□□□ -1.25
VCAN-210ENST00000513960 FAM223BA6NKX1 122 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 LINC01619G3V211 115 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 M0R2P5 195 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 CD28P10747 220 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 ZNF876PQ49A33 203 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 FAM223AQ8IWN6 122 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 RHODO00212 210 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 RPL32P62910 135 aaKnown RBP7.25□□□□□ -1.25
VCAN-210ENST00000513960 C9orf47Q6ZRZ4 202 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 DAND5Q8N907 189 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 ZNF625Q96I27 306 aaPredicted RBP7.25□□□□□ -1.25
VCAN-210ENST00000513960 CCL19Q99731 98 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 IGLV4-69A0A075B6H9 119 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 CRYGDP07320 174 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 ELANEP08246 267 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 KLK9Q2XQG4 91 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 KLK9Q9UKQ9 250 aa7.25□□□□□ -1.25
VCAN-210ENST00000513960 CSMD1Q96PZ7 3565 aa7.24□□□□□ -1.25
VCAN-210ENST00000513960 Q6ZSV7 163 aa7.24□□□□□ -1.25
VCAN-210ENST00000513960 IGHV4-61A0A0C4DH41 118 aa7.24□□□□□ -1.25
VCAN-210ENST00000513960 OVOL1O14753 267 aa7.24□□□□□ -1.25
VCAN-210ENST00000513960 TRBV12-3P01733 135 aa7.24□□□□□ -1.25
VCAN-210ENST00000513960 COX6B1P14854 86 aa7.24□□□□□ -1.25
VCAN-210ENST00000513960 UNQ9165/PRO28630Q6UXU0 137 aa7.24□□□□□ -1.25
VCAN-210ENST00000513960 MRPL53Q96EL3 112 aaKnown RBP7.24□□□□□ -1.25
VCAN-210ENST00000513960 TIMM21Q9BVV7 248 aa7.24□□□□□ -1.25
VCAN-210ENST00000513960 RS1O15537 224 aa7.23□□□□□ -1.25
VCAN-210ENST00000513960 TRIAP1O43715 76 aa7.23□□□□□ -1.25
VCAN-210ENST00000513960 ATP5J2P56134 94 aa7.23□□□□□ -1.25
VCAN-210ENST00000513960 TMEM141Q96I45 108 aa7.23□□□□□ -1.25
VCAN-210ENST00000513960 TSHBP01222 138 aa7.23□□□□□ -1.25
VCAN-210ENST00000513960 ZFAND2AQ8N6M9 145 aa7.23□□□□□ -1.25
VCAN-210ENST00000513960 PSMG3-AS1Q96PY0 264 aa7.23□□□□□ -1.25
VCAN-210ENST00000513960 CEMP1Q6PRD7 247 aaPredicted RBP7.23□□□□□ -1.25
VCAN-210ENST00000513960 DUX5Q96PT3 197 aa7.23□□□□□ -1.25
VCAN-210ENST00000513960 ASH1LQ9NR48 2969 aaKnown RBP7.22□□□□□ -1.25
VCAN-210ENST00000513960 A8MZ25 164 aa7.22□□□□□ -1.25
VCAN-210ENST00000513960 KNCNA6PVL3 124 aa7.22□□□□□ -1.25
VCAN-210ENST00000513960 H3BUX3 64 aa7.22□□□□□ -1.25
VCAN-210ENST00000513960 NHLRC4P0CG21 123 aaPredicted RBP7.22□□□□□ -1.25
VCAN-210ENST00000513960 FAM236AA0A1B0GUQ0 79 aa7.22□□□□□ -1.25
VCAN-210ENST00000513960 FAM236BA0A1B0GV22 79 aa7.22□□□□□ -1.25
VCAN-210ENST00000513960 RHPN1-AS1Q9BWJ2 59 aa7.22□□□□□ -1.25
VCAN-210ENST00000513960 U3KQE9 123 aa7.22□□□□□ -1.25
VCAN-210ENST00000513960 TRBV10-2A0A0K0K1G8 114 aa7.21□□□□□ -1.25
VCAN-210ENST00000513960 LEPROTO15243 131 aa7.21□□□□□ -1.25
VCAN-210ENST00000513960 IGHV4-38-2P0DP08 117 aa7.21□□□□□ -1.25
VCAN-210ENST00000513960 DGAT2L7PQ6IED9 249 aa7.21□□□□□ -1.25
VCAN-210ENST00000513960 C10orf105Q8TEF2 133 aa7.21□□□□□ -1.25
VCAN-210ENST00000513960 CITED2Q99967 270 aaPredicted RBP7.21□□□□□ -1.25
VCAN-210ENST00000513960 C9orf153Q5TBE3 101 aa7.21□□□□□ -1.26
VCAN-210ENST00000513960 NDUFA12Q9UI09 145 aa7.21□□□□□ -1.26
VCAN-210ENST00000513960 ICOSQ9Y6W8 199 aa7.21□□□□□ -1.26
VCAN-210ENST00000513960 RNASE3P12724 160 aaKnown RBP7.21□□□□□ -1.26
VCAN-210ENST00000513960 TMEM263Q8WUH6 116 aaKnown RBP7.21□□□□□ -1.26
VCAN-210ENST00000513960 USMG5Q96IX5 58 aa7.21□□□□□ -1.26
VCAN-210ENST00000513960 CSPG4Q6UVK1 2322 aa7.2□□□□□ -1.26
VCAN-210ENST00000513960 NDUFA4O00483 81 aa7.2□□□□□ -1.26
VCAN-210ENST00000513960 MRPL23Q16540 153 aaKnown RBP7.2□□□□□ -1.26
VCAN-210ENST00000513960 IGHV4-4A0A075B6R2 117 aa7.2□□□□□ -1.26
VCAN-210ENST00000513960 IGIPA6NJ69 53 aa7.2□□□□□ -1.26
VCAN-210ENST00000513960 GPHB5Q86YW7 130 aa7.2□□□□□ -1.26
VCAN-210ENST00000513960 A0A0J9YXY3 114 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 WNK1Q9H4A3 2382 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 IGHV4-30-2A0A087WSY4 118 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 IGHG2P01859 326 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 MSMBP08118 114 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 ZNF22P17026 224 aaPredicted RBP7.19□□□□□ -1.26
VCAN-210ENST00000513960 ID1P41134 155 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 SPINK13Q1W4C9 94 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 TMEM101Q96IK0 257 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 TIMM17AQ99595 171 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 LENEPQ9Y5L5 61 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 TRGV11A0A075B6L2 103 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 MDFICQ9P1T7 246 aa7.19□□□□□ -1.26
VCAN-210ENST00000513960 IGHV3-38A0A0C4DH36 116 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 H3BUA1 57 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 BLCAPP62952 87 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 C19orf54Q5BKX5 351 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 ODF3Q96PU9 254 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 LGALS9O00182 355 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 A0A0B4J2C4 111 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 P0DMU3 169 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 FAM231AP0DMU4 169 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 FAM231CP0DMU5 169 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 TNFRSF18Q9Y5U5 241 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 TMEM223A0PJW6 202 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 A6NDX4 124 aa7.18□□□□□ -1.26
VCAN-210ENST00000513960 SVEP1Q4LDE5 3571 aa7.17□□□□□ -1.26
VCAN-210ENST00000513960 PKD1L2Q7Z442 2459 aa7.17□□□□□ -1.26
VCAN-210ENST00000513960 H7C423 109 aa7.17□□□□□ -1.26
VCAN-210ENST00000513960 POLR2KP53803 58 aaKnown RBP7.17□□□□□ -1.26
VCAN-210ENST00000513960 EDA2RQ9HAV5 297 aa7.17□□□□□ -1.26
VCAN-210ENST00000513960 B4DSR2 109 aa7.17□□□□□ -1.26
VCAN-210ENST00000513960 SBSPONQ8IVN8 264 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms