RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 SPAARA0A1B0GVQ0 90 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 TMEM223A0PJW6 202 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 IGIPA6NJ69 53 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 F5H768 121 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 CCDC179H3BU77 68 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 K7EIM0 57 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 CDK2AP2O75956 126 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 ERC2-IT1O76042 136 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 NXPH4O95158 308 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 IGLV2-23P01705 113 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 LINC00694P0DN24 101 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 CCL4P13236 92 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 SYNJ2BPP57105 145 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 SNRPD3P62318 126 aaKnown RBP2.41□□□□□ -2.02
PROM1-216ENST00000513946 DAZ2Q13117 558 aaKnown RBP2.41□□□□□ -2.02
PROM1-216ENST00000513946 RBMY1FQ15415 496 aaKnown RBP2.41□□□□□ -2.02
PROM1-216ENST00000513946 HCP5Q6MZN7 132 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 DUX4L9Q6RFH8 374 aaPredicted RBP2.41□□□□□ -2.02
PROM1-216ENST00000513946 APRG1Q8IVJ8 170 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 DPH3Q96FX2 82 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 GAFA1Q96PS6 74 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 NAA38Q9BRA0 125 aaKnown RBP2.41□□□□□ -2.02
PROM1-216ENST00000513946 AGPAT4-IT1Q9H0P7 198 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 C11orf68Q9H3H3 251 aaKnown RBP2.41□□□□□ -2.02
PROM1-216ENST00000513946 TMEM131Q92545 1883 aa2.41□□□□□ -2.02
PROM1-216ENST00000513946 ATG2AQ2TAZ0 1938 aa2.4□□□□□ -2.02
PROM1-216ENST00000513946 KIAA1549LQ6ZVL6 1849 aa2.4□□□□□ -2.02
PROM1-216ENST00000513946 THADAQ6YHU6 1953 aa2.4□□□□□ -2.02
PROM1-216ENST00000513946 IGLV11-55A0A075B6I3 123 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 A0A087WZ39 114 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 MRPS12O15235 138 aaKnown RBP2.4□□□□□ -2.03
PROM1-216ENST00000513946 LYZL6O75951 148 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 BAALC-AS2P0C853 105 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 CRIP1P50238 77 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 INSL3P51460 131 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 POLR2KP53803 58 aaKnown RBP2.4□□□□□ -2.03
PROM1-216ENST00000513946 CMC4P56277 68 aaPredicted RBP2.4□□□□□ -2.03
PROM1-216ENST00000513946 HIST1H4AP62805 103 aaKnown RBP2.4□□□□□ -2.03
PROM1-216ENST00000513946 LOXL1Q08397 574 aaPredicted RBP2.4□□□□□ -2.03
PROM1-216ENST00000513946 KLRB1Q12918 225 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 DIAPH2-AS1Q14236 149 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 GUSBP11Q6P575 273 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 TMEM61Q8N0U2 210 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 TMEM86BQ8N661 226 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 MDS2Q8NDY4 140 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 LINC01587Q99440 93 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 CHCHD5Q9BSY4 110 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 MRPL36Q9P0J6 103 aaKnown RBP2.4□□□□□ -2.03
PROM1-216ENST00000513946 NDUFA12Q9UI09 145 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 TP53TG1Q9Y2A0 90 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 MYOFQ9NZM1 2061 aa2.4□□□□□ -2.03
PROM1-216ENST00000513946 ZNF318Q5VUA4 2279 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 LRRK1Q38SD2 2015 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 TRAV7A0A075B6U4 112 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 TMSB15BA0A087X1C1 80 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 TRAV8-3A0A0A6YYJ7 113 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 K7EMT4 169 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 K7ENP7 123 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 M0R1B8 84 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 NDUFA4O00483 81 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 NDUFA1O15239 70 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 NDUFB1O75438 58 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 IGLV1-47P01700 117 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 CRPP02741 224 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 RNASE4P34096 147 aaKnown RBP2.39□□□□□ -2.03
PROM1-216ENST00000513946 RPL28P46779 137 aaKnown RBP2.39□□□□□ -2.03
PROM1-216ENST00000513946 DEFB132Q7Z7B7 95 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 MUSTN1Q8IVN3 82 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 C11orf45Q8TAV5 145 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 DCANP1Q8TF63 244 aa2.39□□□□□ -2.03
PROM1-216ENST00000513946 PRRC2AP48634 2157 aaKnown RBP2.39□□□□□ -2.03
PROM1-216ENST00000513946 GOLGA4Q13439 2230 aaKnown RBP2.38□□□□□ -2.03
PROM1-216ENST00000513946 LTBP2Q14767 1821 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 IGHV7-4-1A0A0J9YVY3 117 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 A0A0U1RQV1 116 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 FAM236DA0A1B0GTK5 79 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 RS1O15537 224 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 IGHV1-46P01743 117 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 MGPP08493 103 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 IGHV3-30-3P0DP02 117 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 FAM236CP0DP71 79 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 CCL3L1P16619 93 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 RPL35AP18077 110 aaKnown RBP2.38□□□□□ -2.03
PROM1-216ENST00000513946 CXCL6P80162 114 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 KLKP1Q107X0 134 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 C6orf226Q5I0X4 101 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 ATP1A1-AS1Q5TC04 95 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 IGFL2Q6UWQ7 119 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 IGFL3Q6UXB1 125 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 DOCK3Q8IZD9 2030 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 C20orf203Q8NBC4 194 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 KIR2DL5BQ8NHK3 375 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 PHF3Q92576 2039 aaKnown RBP2.38□□□□□ -2.03
PROM1-216ENST00000513946 C9orf85Q96MD7 179 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 TMEM243Q9BU79 118 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 JPT2Q9H910 190 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 DAZ1Q9NQZ3 744 aaKnown RBP2.38□□□□□ -2.03
PROM1-216ENST00000513946 ORMDL1Q9P0S3 153 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 DOCK11Q5JSL3 2073 aa2.38□□□□□ -2.03
PROM1-216ENST00000513946 DOCK8Q8NF50 2099 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms