RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 TMEM97Q5BJF2 176 aa6.46□□□□□ -1.38
CLDND1-227ENST00000513452 DERL1Q9BUN8 251 aa6.46□□□□□ -1.38
CLDND1-227ENST00000513452 SMIM3Q9BZL3 60 aa6.46□□□□□ -1.38
CLDND1-227ENST00000513452 TRBV6-1A0A0K0K1D8 114 aa6.45□□□□□ -1.38
CLDND1-227ENST00000513452 H0YIZ8 118 aa6.45□□□□□ -1.38
CLDND1-227ENST00000513452 LYRM1O43325 122 aa6.45□□□□□ -1.38
CLDND1-227ENST00000513452 SH2D1AO60880 128 aa6.45□□□□□ -1.38
CLDND1-227ENST00000513452 SIX6O95475 246 aa6.45□□□□□ -1.38
CLDND1-227ENST00000513452 CACNG7P62955 275 aa6.45□□□□□ -1.38
CLDND1-227ENST00000513452 PRR27Q6MZM9 219 aa6.45□□□□□ -1.38
CLDND1-227ENST00000513452 C20orf203Q8NBC4 194 aa6.45□□□□□ -1.38
CLDND1-227ENST00000513452 GFRA4Q9GZZ7 299 aa6.45□□□□□ -1.38
CLDND1-227ENST00000513452 PLA2G10O15496 165 aa6.44□□□□□ -1.38
CLDND1-227ENST00000513452 GZMBP10144 247 aa6.44□□□□□ -1.38
CLDND1-227ENST00000513452 GCHFRP30047 84 aa6.44□□□□□ -1.38
CLDND1-227ENST00000513452 CDC34P49427 236 aaPredicted RBP6.44□□□□□ -1.38
CLDND1-227ENST00000513452 PRR4Q16378 134 aa6.44□□□□□ -1.38
CLDND1-227ENST00000513452 Q86TA4 180 aa6.44□□□□□ -1.38
CLDND1-227ENST00000513452 ZNF664Q8N3J9 261 aa6.44□□□□□ -1.38
CLDND1-227ENST00000513452 RBM38Q9H0Z9 239 aaKnown RBP6.44□□□□□ -1.38
CLDND1-227ENST00000513452 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
CLDND1-227ENST00000513452 HSPB11Q9Y547 144 aa6.44□□□□□ -1.38
CLDND1-227ENST00000513452 IGLV4-60A0A075B6I1 120 aa6.43□□□□□ -1.38
CLDND1-227ENST00000513452 IGHV1-24A0A0C4DH33 117 aa6.43□□□□□ -1.38
CLDND1-227ENST00000513452 H2AFB2P0C5Z0 115 aa6.43□□□□□ -1.38
CLDND1-227ENST00000513452 CRIP1P50238 77 aa6.43□□□□□ -1.38
CLDND1-227ENST00000513452 IQCJQ1A5X6 159 aa6.43□□□□□ -1.38
CLDND1-227ENST00000513452 CFAP161Q6P656 301 aa6.43□□□□□ -1.38
CLDND1-227ENST00000513452 PRR26Q8N8Z3 221 aa6.43□□□□□ -1.38
CLDND1-227ENST00000513452 LINC00474Q9P2X8 69 aa6.43□□□□□ -1.38
CLDND1-227ENST00000513452 GAGE12HA6NDE8 117 aa6.42□□□□□ -1.38
CLDND1-227ENST00000513452 CCDC160A6NGH7 325 aa6.42□□□□□ -1.38
CLDND1-227ENST00000513452 F5H697 171 aa6.42□□□□□ -1.38
CLDND1-227ENST00000513452 STAG3L2P0CL84 134 aa6.42□□□□□ -1.38
CLDND1-227ENST00000513452 STAG3L3P0CL85 134 aa6.42□□□□□ -1.38
CLDND1-227ENST00000513452 SULT1A2P50226 295 aa6.42□□□□□ -1.38
CLDND1-227ENST00000513452 FAM162BQ5T6X4 162 aa6.42□□□□□ -1.38
CLDND1-227ENST00000513452 OR10AG1Q8NH19 301 aa6.42□□□□□ -1.38
CLDND1-227ENST00000513452 SUN5Q8TC36 379 aa6.42□□□□□ -1.38
CLDND1-227ENST00000513452 INO80EQ8NBZ0 244 aaPredicted RBP6.41□□□□□ -1.38
CLDND1-227ENST00000513452 RAB24Q969Q5 203 aa6.41□□□□□ -1.38
CLDND1-227ENST00000513452 AQP10Q96PS8 301 aa6.41□□□□□ -1.38
CLDND1-227ENST00000513452 WFDC1Q9HC57 220 aa6.41□□□□□ -1.38
CLDND1-227ENST00000513452 PEX7O00628 323 aa6.4□□□□□ -1.38
CLDND1-227ENST00000513452 DEFA3P59666 94 aa6.4□□□□□ -1.38
CLDND1-227ENST00000513452 TMEM243Q9BU79 118 aa6.4□□□□□ -1.38
CLDND1-227ENST00000513452 TMEM167BQ9NRX6 74 aa6.4□□□□□ -1.38
CLDND1-227ENST00000513452 GVQW2A0A096LPI5 108 aaPredicted RBP6.39□□□□□ -1.39
CLDND1-227ENST00000513452 IGKV3OR2-268A0A0C4DH90 116 aa6.39□□□□□ -1.39
CLDND1-227ENST00000513452 MUC21A0A140T8X8 626 aa6.39□□□□□ -1.39
CLDND1-227ENST00000513452 A0A1B0GUV1 79 aa6.39□□□□□ -1.39
CLDND1-227ENST00000513452 RPL12P30050 165 aaKnown RBP6.39□□□□□ -1.39
CLDND1-227ENST00000513452 PPP1R1CQ8WVI7 109 aa6.39□□□□□ -1.39
CLDND1-227ENST00000513452 ZNF471Q9BX82 626 aaPredicted RBP6.39□□□□□ -1.39
CLDND1-227ENST00000513452 CXorf1O96002 111 aa6.38□□□□□ -1.39
CLDND1-227ENST00000513452 MT-ND6P03923 174 aa6.38□□□□□ -1.39
CLDND1-227ENST00000513452 CYCSP99999 105 aaKnown RBP6.38□□□□□ -1.39
CLDND1-227ENST00000513452 ZNF674Q2M3X9 581 aa6.38□□□□□ -1.39
CLDND1-227ENST00000513452 XP32Q5T750 250 aa6.38□□□□□ -1.39
CLDND1-227ENST00000513452 PKIGQ9Y2B9 76 aa6.38□□□□□ -1.39
CLDND1-227ENST00000513452 A0A1W2PRE2 83 aa6.37□□□□□ -1.39
CLDND1-227ENST00000513452 UBE2L6O14933 153 aa6.37□□□□□ -1.39
CLDND1-227ENST00000513452 UBE2G2P60604 165 aa6.37□□□□□ -1.39
CLDND1-227ENST00000513452 SSTP61278 116 aa6.37□□□□□ -1.39
CLDND1-227ENST00000513452 SPANXN1Q5VSR9 72 aa6.37□□□□□ -1.39
CLDND1-227ENST00000513452 COX8CQ7Z4L0 72 aa6.37□□□□□ -1.39
CLDND1-227ENST00000513452 ZFP30Q9Y2G7 519 aa6.37□□□□□ -1.39
CLDND1-227ENST00000513452 FAM240BA0A1B0GVZ2 78 aa6.36□□□□□ -1.39
CLDND1-227ENST00000513452 A6NHS1 94 aa6.36□□□□□ -1.39
CLDND1-227ENST00000513452 MPC2O95563 127 aa6.36□□□□□ -1.39
CLDND1-227ENST00000513452 MGPP08493 103 aa6.36□□□□□ -1.39
CLDND1-227ENST00000513452 PET100P0DJ07 73 aa6.36□□□□□ -1.39
CLDND1-227ENST00000513452 SMIM17P0DL12 118 aa6.36□□□□□ -1.39
CLDND1-227ENST00000513452 H2BFSP57053 126 aa6.36□□□□□ -1.39
CLDND1-227ENST00000513452 UBE2G1P62253 170 aa6.36□□□□□ -1.39
CLDND1-227ENST00000513452 C1orf137Q5JT78 98 aa6.36□□□□□ -1.39
CLDND1-227ENST00000513452 CHCHD10Q8WYQ3 142 aaPredicted RBP6.36□□□□□ -1.39
CLDND1-227ENST00000513452 LINC00526Q96FQ7 95 aa6.36□□□□□ -1.39
CLDND1-227ENST00000513452 CARD19Q96LW7 228 aa6.36□□□□□ -1.39
CLDND1-227ENST00000513452 NKX2-5P52952 324 aaPredicted RBP6.35□□□□□ -1.39
CLDND1-227ENST00000513452 FER1L6-AS1Q8NA97 138 aa6.35□□□□□ -1.39
CLDND1-227ENST00000513452 DIRC1Q969H9 104 aa6.35□□□□□ -1.39
CLDND1-227ENST00000513452 HIST1H2BAQ96A08 127 aa6.35□□□□□ -1.39
CLDND1-227ENST00000513452 FMC1Q96HJ9 113 aa6.35□□□□□ -1.39
CLDND1-227ENST00000513452 AP1S3Q96PC3 154 aa6.35□□□□□ -1.39
CLDND1-227ENST00000513452 A0A1W2PNN7 141 aa6.34□□□□□ -1.39
CLDND1-227ENST00000513452 M0QY20 66 aa6.34□□□□□ -1.39
CLDND1-227ENST00000513452 AMTP48728 403 aa6.34□□□□□ -1.39
CLDND1-227ENST00000513452 PTTG1IPP53801 180 aa6.34□□□□□ -1.39
CLDND1-227ENST00000513452 GAGE2BQ13066 116 aa6.34□□□□□ -1.39
CLDND1-227ENST00000513452 ACTR3CQ9C0K3 210 aaPredicted RBP6.34□□□□□ -1.39
CLDND1-227ENST00000513452 IGLV1-50A0A075B6I6 118 aa6.33□□□□□ -1.4
CLDND1-227ENST00000513452 FAM74A7A6NL05 159 aa6.33□□□□□ -1.4
CLDND1-227ENST00000513452 SNAI2O43623 268 aa6.33□□□□□ -1.4
CLDND1-227ENST00000513452 LTAP01374 205 aa6.33□□□□□ -1.4
CLDND1-227ENST00000513452 MBP02144 154 aa6.33□□□□□ -1.4
CLDND1-227ENST00000513452 OR5AL1P0C617 328 aa6.33□□□□□ -1.4
CLDND1-227ENST00000513452 ATP6V0CP27449 155 aa6.33□□□□□ -1.4
CLDND1-227ENST00000513452 FOXI1Q12951 378 aa6.33□□□□□ -1.4
CLDND1-227ENST00000513452 SUMO4Q6EEV6 95 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms