RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 HLA-DRB4X5D2U9 266 aa7.03□□□□□ -1.28
MSH3-203ENST00000512531 TRAV12-1A0A0B4J245 112 aa7.02□□□□□ -1.29
MSH3-203ENST00000512531 A0A1B0GV90 55 aa7.02□□□□□ -1.29
MSH3-203ENST00000512531 hDV102S1A0JD36 115 aa7.02□□□□□ -1.29
MSH3-203ENST00000512531 DLEU1O43261 78 aa7.02□□□□□ -1.29
MSH3-203ENST00000512531 GNRH2O43555 120 aa7.02□□□□□ -1.29
MSH3-203ENST00000512531 PRB2P02812 416 aaPredicted RBP7.02□□□□□ -1.29
MSH3-203ENST00000512531 RNASE3P12724 160 aaKnown RBP7.02□□□□□ -1.29
MSH3-203ENST00000512531 CD300EQ496F6 205 aaPredicted RBP7.02□□□□□ -1.29
MSH3-203ENST00000512531 C10orf99Q6UWK7 81 aa7.02□□□□□ -1.29
MSH3-203ENST00000512531 LINC00173Q6ZV60 143 aa7.02□□□□□ -1.29
MSH3-203ENST00000512531 TRPT1Q86TN4 253 aaKnown RBP7.02□□□□□ -1.29
MSH3-203ENST00000512531 SCGB3A1Q96QR1 104 aa7.02□□□□□ -1.29
MSH3-203ENST00000512531 CYSLTR1Q9Y271 337 aa7.02□□□□□ -1.29
MSH3-203ENST00000512531 IGHV3-16A0A0C4DH30 117 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 A8MWV9 139 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 INSP01308 110 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 DEFB131AP59861 70 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 SPINK13Q1W4C9 94 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 DGAT2L7PQ6IED9 249 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 ZNF575Q86XF7 245 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 PTH2Q96A98 100 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 TMEM141Q96I45 108 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 C9orf85Q96MD7 179 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 C18orf15Q96N68 181 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 SPXQ9BT56 116 aa7.01□□□□□ -1.29
MSH3-203ENST00000512531 IGLV2-18A0A075B6J9 118 aa7□□□□□ -1.29
MSH3-203ENST00000512531 A0A087WX48 190 aa7□□□□□ -1.29
MSH3-203ENST00000512531 A0A096LNJ9 63 aa7□□□□□ -1.29
MSH3-203ENST00000512531 A6NDN8 102 aa7□□□□□ -1.29
MSH3-203ENST00000512531 CCL24O00175 119 aa7□□□□□ -1.29
MSH3-203ENST00000512531 RHODO00212 210 aa7□□□□□ -1.29
MSH3-203ENST00000512531 IGKV3-20P01619 116 aa7□□□□□ -1.29
MSH3-203ENST00000512531 CD28P10747 220 aa7□□□□□ -1.29
MSH3-203ENST00000512531 HERVK_113P61574 105 aa7□□□□□ -1.29
MSH3-203ENST00000512531 SEC11AP67812 179 aa7□□□□□ -1.29
MSH3-203ENST00000512531 ZNF56Q15929 161 aa7□□□□□ -1.29
MSH3-203ENST00000512531 NSUN5P1Q3KNT7 163 aa7□□□□□ -1.29
MSH3-203ENST00000512531 STHQ8IWL8 128 aa7□□□□□ -1.29
MSH3-203ENST00000512531 TOMM6Q96B49 74 aa7□□□□□ -1.29
MSH3-203ENST00000512531 DUX3Q96PT4 197 aa7□□□□□ -1.29
MSH3-203ENST00000512531 CITED2Q99967 270 aaPredicted RBP7□□□□□ -1.29
MSH3-203ENST00000512531 LINC00467Q9BRT7 94 aa7□□□□□ -1.29
MSH3-203ENST00000512531 CSTL1Q9H114 145 aa7□□□□□ -1.29
MSH3-203ENST00000512531 RYR3Q15413 4870 aa7□□□□□ -1.29
MSH3-203ENST00000512531 TRAV26-2A0A0B4J265 109 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 TRBV6-5A0A0K0K1A5 114 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 A8MTW9 85 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 OR11H12B2RN74 326 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 HINT1P49773 126 aaPredicted RBP6.99□□□□□ -1.29
MSH3-203ENST00000512531 RHOHQ15669 191 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 DEFB136Q30KP8 78 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 DEFB114Q30KQ6 69 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 MAJINQ3KP22 176 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 ERASQ7Z444 233 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 RASL10AQ92737 203 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 WWC2-AS2Q96NR7 200 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 COL7A1Q02388 2944 aa6.99□□□□□ -1.29
MSH3-203ENST00000512531 F8VRH5 84 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 H3BMM0 161 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 K7EIL1 84 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 M0R2P5 195 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 GATA1P15976 413 aaPredicted RBP6.98□□□□□ -1.29
MSH3-203ENST00000512531 NMUP48645 174 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 TIRAPP58753 221 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 EGFEM1PQ0D2K5 195 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 HSD52Q0P140 79 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 SMAGPQ0VAQ4 97 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 GAGE1Q13065 139 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 ZNF876PQ49A33 203 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 FAM74A4Q5TZK3 123 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 SUMO4Q6EEV6 95 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 C2orf66Q6UXQ4 117 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 BOD1L2Q8IYS8 172 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 TMEM61Q8N0U2 210 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 LINC00469Q8N7U9 141 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 DLX4Q92988 240 aaPredicted RBP6.98□□□□□ -1.29
MSH3-203ENST00000512531 LINC01587Q99440 93 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 TMEM208Q9BTX3 173 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 MAP6D1Q9H9H5 199 aa6.98□□□□□ -1.29
MSH3-203ENST00000512531 CHTOPQ9Y3Y2 248 aaKnown RBP6.98□□□□□ -1.29
MSH3-203ENST00000512531 TRAV12-2A0A075B6T6 113 aa6.97□□□□□ -1.29
MSH3-203ENST00000512531 DEFB1P60022 68 aa6.97□□□□□ -1.29
MSH3-203ENST00000512531 ORAOV1Q8WV07 137 aa6.97□□□□□ -1.29
MSH3-203ENST00000512531 B9D2Q9BPU9 175 aa6.97□□□□□ -1.29
MSH3-203ENST00000512531 FAM110AQ9BQ89 295 aa6.97□□□□□ -1.29
MSH3-203ENST00000512531 C1QTNF4Q9BXJ3 329 aa6.97□□□□□ -1.29
MSH3-203ENST00000512531 EDA2RQ9HAV5 297 aa6.97□□□□□ -1.29
MSH3-203ENST00000512531 ZNF256Q9Y2P7 627 aaPredicted RBP6.97□□□□□ -1.29
MSH3-203ENST00000512531 TRBV27A0A0K0K1C4 114 aa6.96□□□□□ -1.3
MSH3-203ENST00000512531 SDHAF1A6NFY7 115 aa6.96□□□□□ -1.3
MSH3-203ENST00000512531 KNCNA6PVL3 124 aa6.96□□□□□ -1.3
MSH3-203ENST00000512531 I3L3M4 83 aa6.96□□□□□ -1.3
MSH3-203ENST00000512531 ZNF25P17030 456 aaPredicted RBP6.96□□□□□ -1.3
MSH3-203ENST00000512531 EDN2P20800 178 aa6.96□□□□□ -1.3
MSH3-203ENST00000512531 FXYD7P58549 80 aa6.96□□□□□ -1.3
MSH3-203ENST00000512531 AMTNQ6UX39 209 aa6.96□□□□□ -1.3
MSH3-203ENST00000512531 DNAJC30Q96LL9 226 aa6.96□□□□□ -1.3
MSH3-203ENST00000512531 TIMM17AQ99595 171 aa6.96□□□□□ -1.3
MSH3-203ENST00000512531 HIGD1BQ9P298 99 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms