RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 DERL1Q9BUN8 251 aa11.79□□□□□ -0.52
HMGCS1-206ENST00000511774 IGLV4-60A0A075B6I1 120 aa11.78□□□□□ -0.52
HMGCS1-206ENST00000511774 TRBV6-1A0A0K0K1D8 114 aa11.78□□□□□ -0.52
HMGCS1-206ENST00000511774 PEX7O00628 323 aa11.78□□□□□ -0.52
HMGCS1-206ENST00000511774 STPG4Q8N801 248 aa11.78□□□□□ -0.52
HMGCS1-206ENST00000511774 OR10AG1Q8NH19 301 aa11.78□□□□□ -0.52
HMGCS1-206ENST00000511774 TMEM167BQ9NRX6 74 aa11.78□□□□□ -0.52
HMGCS1-206ENST00000511774 A0A1W2PRE2 83 aa11.77□□□□□ -0.53
HMGCS1-206ENST00000511774 ZNF674Q2M3X9 581 aa11.77□□□□□ -0.53
HMGCS1-206ENST00000511774 FAM162BQ5T6X4 162 aa11.77□□□□□ -0.53
HMGCS1-206ENST00000511774 INO80EQ8NBZ0 244 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-206ENST00000511774 KRTAP9-6A0A140TA67 174 aa11.76□□□□□ -0.53
HMGCS1-206ENST00000511774 CXorf1O96002 111 aa11.76□□□□□ -0.53
HMGCS1-206ENST00000511774 IQCJQ1A5X6 159 aa11.76□□□□□ -0.53
HMGCS1-206ENST00000511774 TRBV25-1A0A075B6N4 114 aa11.75□□□□□ -0.53
HMGCS1-206ENST00000511774 A0A096LNI7 61 aa11.75□□□□□ -0.53
HMGCS1-206ENST00000511774 MUC21A0A140T8X8 626 aa11.75□□□□□ -0.53
HMGCS1-206ENST00000511774 NDUFS6O75380 124 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-206ENST00000511774 IFNA7P01567 189 aa11.75□□□□□ -0.53
HMGCS1-206ENST00000511774 DEFA3P59666 94 aa11.75□□□□□ -0.53
HMGCS1-206ENST00000511774 UBE2G2P60604 165 aa11.75□□□□□ -0.53
HMGCS1-206ENST00000511774 TRAV8-4A0A0B4J246 113 aa11.74□□□□□ -0.53
HMGCS1-206ENST00000511774 P01737 135 aa11.74□□□□□ -0.53
HMGCS1-206ENST00000511774 ATP6V0CP27449 155 aa11.74□□□□□ -0.53
HMGCS1-206ENST00000511774 ZNF726P1Q15940 193 aa11.74□□□□□ -0.53
HMGCS1-206ENST00000511774 CCDC32Q9BV29 185 aa11.74□□□□□ -0.53
HMGCS1-206ENST00000511774 HIGD2BQ4VC39 106 aa11.73□□□□□ -0.53
HMGCS1-206ENST00000511774 TMEM97Q5BJF2 176 aa11.73□□□□□ -0.53
HMGCS1-206ENST00000511774 PET100P0DJ07 73 aa11.72□□□□□ -0.53
HMGCS1-206ENST00000511774 RPS10P46783 165 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-206ENST00000511774 MZT2BQ6NZ67 158 aa11.72□□□□□ -0.53
HMGCS1-206ENST00000511774 ZFP30Q9Y2G7 519 aa11.72□□□□□ -0.53
HMGCS1-206ENST00000511774 IGHV1-24A0A0C4DH33 117 aa11.71□□□□□ -0.53
HMGCS1-206ENST00000511774 FAM74A7A6NL05 159 aa11.71□□□□□ -0.53
HMGCS1-206ENST00000511774 PSMG3Q9BT73 122 aaPredicted RBP11.71□□□□□ -0.53
HMGCS1-206ENST00000511774 F5H697 171 aa11.7□□□□□ -0.54
HMGCS1-206ENST00000511774 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-206ENST00000511774 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-206ENST00000511774 A0A1B0GUV1 79 aa11.69□□□□□ -0.54
HMGCS1-206ENST00000511774 GAGE12HA6NDE8 117 aa11.69□□□□□ -0.54
HMGCS1-206ENST00000511774 GZMBP10144 247 aa11.69□□□□□ -0.54
HMGCS1-206ENST00000511774 HIST1H2BAQ96A08 127 aa11.69□□□□□ -0.54
HMGCS1-206ENST00000511774 ZNF471Q9BX82 626 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-206ENST00000511774 H7C1H1 209 aa11.68□□□□□ -0.54
HMGCS1-206ENST00000511774 SNAI2O43623 268 aa11.68□□□□□ -0.54
HMGCS1-206ENST00000511774 LTAP01374 205 aa11.68□□□□□ -0.54
HMGCS1-206ENST00000511774 SSTP61278 116 aa11.68□□□□□ -0.54
HMGCS1-206ENST00000511774 ENKURQ8TC29 256 aa11.68□□□□□ -0.54
HMGCS1-206ENST00000511774 SSBP4Q9BWG4 385 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-206ENST00000511774 INMT-MINDY4F8WBC2 141 aa11.67□□□□□ -0.54
HMGCS1-206ENST00000511774 FMC1Q96HJ9 113 aa11.67□□□□□ -0.54
HMGCS1-206ENST00000511774 AQP10Q96PS8 301 aa11.67□□□□□ -0.54
HMGCS1-206ENST00000511774 TNFSF18Q9UNG2 199 aa11.67□□□□□ -0.54
HMGCS1-206ENST00000511774 M0QY20 66 aa11.66□□□□□ -0.54
HMGCS1-206ENST00000511774 MBP02144 154 aa11.66□□□□□ -0.54
HMGCS1-206ENST00000511774 SERF2P84101 59 aa11.66□□□□□ -0.54
HMGCS1-206ENST00000511774 Q6ZRP5 223 aa11.66□□□□□ -0.54
HMGCS1-206ENST00000511774 IFITM3Q01628 133 aa11.65□□□□□ -0.54
HMGCS1-206ENST00000511774 LCE2AQ5TA79 106 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-206ENST00000511774 TMEM243Q9BU79 118 aa11.65□□□□□ -0.54
HMGCS1-206ENST00000511774 SSNA1O43805 119 aa11.64□□□□□ -0.55
HMGCS1-206ENST00000511774 UBE2G1P62253 170 aa11.64□□□□□ -0.55
HMGCS1-206ENST00000511774 GVQW2A0A096LPI5 108 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-206ENST00000511774 CXCL1P09341 107 aa11.63□□□□□ -0.55
HMGCS1-206ENST00000511774 OR5AL1P0C617 328 aa11.63□□□□□ -0.55
HMGCS1-206ENST00000511774 SPANXN1Q5VSR9 72 aa11.63□□□□□ -0.55
HMGCS1-206ENST00000511774 IGKV3OR2-268A0A0C4DH90 116 aa11.62□□□□□ -0.55
HMGCS1-206ENST00000511774 CTXND1A0A1B0GTU2 59 aa11.62□□□□□ -0.55
HMGCS1-206ENST00000511774 SULT1A2P50226 295 aa11.62□□□□□ -0.55
HMGCS1-206ENST00000511774 SUMO4Q6EEV6 95 aa11.62□□□□□ -0.55
HMGCS1-206ENST00000511774 CFAP161Q6P656 301 aa11.62□□□□□ -0.55
HMGCS1-206ENST00000511774 LINC00526Q96FQ7 95 aa11.62□□□□□ -0.55
HMGCS1-206ENST00000511774 MARVELD1Q9BSK0 173 aa11.62□□□□□ -0.55
HMGCS1-206ENST00000511774 A6NHS1 94 aa11.61□□□□□ -0.55
HMGCS1-206ENST00000511774 NKX2-5P52952 324 aaPredicted RBP11.61□□□□□ -0.55
HMGCS1-206ENST00000511774 FAM231BA6NCW3 169 aa11.6□□□□□ -0.55
HMGCS1-206ENST00000511774 PRR26Q8N8Z3 221 aa11.6□□□□□ -0.55
HMGCS1-206ENST00000511774 NKX6-2Q9C056 277 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-206ENST00000511774 MGPP08493 103 aa11.59□□□□□ -0.55
HMGCS1-206ENST00000511774 CHCHD10Q8WYQ3 142 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-206ENST00000511774 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
HMGCS1-206ENST00000511774 SMIM17P0DL12 118 aa11.58□□□□□ -0.56
HMGCS1-206ENST00000511774 RPL7L1Q6DKI1 246 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-206ENST00000511774 MLST8Q9BVC4 326 aa11.58□□□□□ -0.56
HMGCS1-206ENST00000511774 UPK1BO75841 260 aa11.57□□□□□ -0.56
HMGCS1-206ENST00000511774 AKR1C3P42330 323 aa11.57□□□□□ -0.56
HMGCS1-206ENST00000511774 FOXI1Q12951 378 aa11.57□□□□□ -0.56
HMGCS1-206ENST00000511774 LINC00474Q9P2X8 69 aa11.57□□□□□ -0.56
HMGCS1-206ENST00000511774 A0A1W2PNN7 141 aa11.56□□□□□ -0.56
HMGCS1-206ENST00000511774 Q5BKY6 102 aa11.56□□□□□ -0.56
HMGCS1-206ENST00000511774 PGLYRP4Q96LB8 373 aa11.56□□□□□ -0.56
HMGCS1-206ENST00000511774 PSORS1C2Q9UIG4 136 aa11.56□□□□□ -0.56
HMGCS1-206ENST00000511774 CST9LP1Q5W188 147 aa11.55□□□□□ -0.56
HMGCS1-206ENST00000511774 UBE2L6O14933 153 aa11.54□□□□□ -0.56
HMGCS1-206ENST00000511774 AMTP48728 403 aa11.54□□□□□ -0.56
HMGCS1-206ENST00000511774 FHITP49789 147 aa11.54□□□□□ -0.56
HMGCS1-206ENST00000511774 ZNF664Q8N3J9 261 aa11.54□□□□□ -0.56
HMGCS1-206ENST00000511774 MAP1LC3B2A6NCE7 125 aa11.53□□□□□ -0.56
HMGCS1-206ENST00000511774 RASL11AQ6T310 242 aa11.53□□□□□ -0.56
HMGCS1-206ENST00000511774 CARD19Q96LW7 228 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms