RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 HLA-DQA1P01909 254 aa5.25□□□□□ -1.57
LINC01088-207ENST00000511241 ZNF688P0C7X2 276 aa5.25□□□□□ -1.57
LINC01088-207ENST00000511241 RBMY1A1P0DJD3 496 aaKnown RBP5.25□□□□□ -1.57
LINC01088-207ENST00000511241 RBMY1CP0DJD4 496 aa5.25□□□□□ -1.57
LINC01088-207ENST00000511241 DSCR10P59022 87 aa5.25□□□□□ -1.57
LINC01088-207ENST00000511241 GNG5P63218 68 aa5.25□□□□□ -1.57
LINC01088-207ENST00000511241 RBMY1FQ15415 496 aaKnown RBP5.25□□□□□ -1.57
LINC01088-207ENST00000511241 GOLT1AQ6ZVE7 132 aa5.25□□□□□ -1.57
LINC01088-207ENST00000511241 TSKUQ8WUA8 353 aa5.25□□□□□ -1.57
LINC01088-207ENST00000511241 SLC50A1Q9BRV3 221 aa5.25□□□□□ -1.57
LINC01088-207ENST00000511241 NDFIP1Q9BT67 221 aa5.25□□□□□ -1.57
LINC01088-207ENST00000511241 RNASE7Q9H1E1 156 aaKnown RBP5.25□□□□□ -1.57
LINC01088-207ENST00000511241 AGRNO00468 2067 aa5.25□□□□□ -1.57
LINC01088-207ENST00000511241 IGLV2-8P01709 118 aa5.24□□□□□ -1.57
LINC01088-207ENST00000511241 SNRPCP09234 159 aaKnown RBP5.24□□□□□ -1.57
LINC01088-207ENST00000511241 DEFB1P60022 68 aa5.24□□□□□ -1.57
LINC01088-207ENST00000511241 RAB4BP61018 213 aa5.24□□□□□ -1.57
LINC01088-207ENST00000511241 PSG3Q16557 428 aa5.24□□□□□ -1.57
LINC01088-207ENST00000511241 COA6Q5JTJ3 125 aaKnown RBP5.24□□□□□ -1.57
LINC01088-207ENST00000511241 FAM162BQ5T6X4 162 aa5.24□□□□□ -1.57
LINC01088-207ENST00000511241 REG3GQ6UW15 175 aa5.24□□□□□ -1.57
LINC01088-207ENST00000511241 ATP5L2Q7Z4Y8 100 aa5.24□□□□□ -1.57
LINC01088-207ENST00000511241 PRNTQ86SH4 94 aa5.24□□□□□ -1.57
LINC01088-207ENST00000511241 EXOC3-AS1Q8N2X6 119 aa5.24□□□□□ -1.57
LINC01088-207ENST00000511241 BORCS7Q96B45 105 aa5.24□□□□□ -1.57
LINC01088-207ENST00000511241 C12orf57Q99622 126 aa5.24□□□□□ -1.57
LINC01088-207ENST00000511241 RPP21Q9H633 154 aaKnown RBP5.24□□□□□ -1.57
LINC01088-207ENST00000511241 KLK5Q9Y337 293 aaPredicted RBP5.24□□□□□ -1.57
LINC01088-207ENST00000511241 PCLOQ9Y6V0 5065 aa5.23□□□□□ -1.57
LINC01088-207ENST00000511241 A0A1B0GW15 77 aa5.23□□□□□ -1.57
LINC01088-207ENST00000511241 RPS20P60866 119 aaKnown RBP5.23□□□□□ -1.57
LINC01088-207ENST00000511241 S100A12P80511 92 aa5.23□□□□□ -1.57
LINC01088-207ENST00000511241 LINC00242Q5T6M2 205 aa5.23□□□□□ -1.57
LINC01088-207ENST00000511241 SAMD13Q5VXD3 122 aa5.23□□□□□ -1.57
LINC01088-207ENST00000511241 Q6AWC8 147 aa5.23□□□□□ -1.57
LINC01088-207ENST00000511241 Q86TA4 180 aa5.23□□□□□ -1.57
LINC01088-207ENST00000511241 Q8NAQ8 132 aa5.23□□□□□ -1.57
LINC01088-207ENST00000511241 PSG8Q9UQ74 426 aa5.23□□□□□ -1.57
LINC01088-207ENST00000511241 RBAKDNA6NC62 111 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 H3BTX0 84 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 PHOX2AO14813 284 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 MRPS12O15235 138 aaKnown RBP5.22□□□□□ -1.57
LINC01088-207ENST00000511241 APCSP02743 223 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 CRISP2P16562 243 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 HLA-DMBP28068 263 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 PAFAH1B2P68402 229 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 PSMG4Q5JS54 123 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 BAGE3Q86Y29 109 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 HIST3H2BBQ8N257 126 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 DCANP1Q8TF63 244 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 C11orf68Q9H3H3 251 aaKnown RBP5.22□□□□□ -1.57
LINC01088-207ENST00000511241 CELA1Q9UNI1 258 aa5.22□□□□□ -1.57
LINC01088-207ENST00000511241 A0A0U1RRA0 63 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 C19orf71A6NCJ1 209 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 HIGD1CA8MV81 97 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 IGLL5B9A064 214 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 FABP4P15090 132 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 CMC4P56277 68 aaPredicted RBP5.21□□□□□ -1.58
LINC01088-207ENST00000511241 TCL1AP56279 114 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 HBBP68871 147 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 Q0VG73 95 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 OR10J3Q5JRS4 329 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 DNLZQ5SXM8 178 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 GDF5OSQ5U4N7 250 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 LGALS9CQ6DKI2 356 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 OR2D3Q8NGH3 330 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 OR10D4PQ8NGN7 298 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 NRN1Q9NPD7 142 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 APLNQ9ULZ1 77 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 ABCA13Q86UQ4 5058 aa5.21□□□□□ -1.58
LINC01088-207ENST00000511241 TRAV2A0A0B4J234 112 aa5.2□□□□□ -1.58
LINC01088-207ENST00000511241 SPINK4O60575 86 aa5.2□□□□□ -1.58
LINC01088-207ENST00000511241 FXYD7P58549 80 aa5.2□□□□□ -1.58
LINC01088-207ENST00000511241 MRPL54Q6P161 138 aaKnown RBP5.2□□□□□ -1.58
LINC01088-207ENST00000511241 TMEM136Q6ZRR5 245 aa5.2□□□□□ -1.58
LINC01088-207ENST00000511241 NUP35Q8NFH5 326 aa5.2□□□□□ -1.58
LINC01088-207ENST00000511241 PACRGQ96M98 296 aaPredicted RBP5.2□□□□□ -1.58
LINC01088-207ENST00000511241 XCL2Q9UBD3 114 aa5.2□□□□□ -1.58
LINC01088-207ENST00000511241 TRAV8-1A0A0A6YYK1 113 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 A0A1B0GUT8 65 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 TMEM189A5PLL7 270 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 FABP5P3A8MUU1 101 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 FOXA3P55318 350 aaPredicted RBP5.19□□□□□ -1.58
LINC01088-207ENST00000511241 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 C12orf74Q32Q52 190 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 PDZD11Q5EBL8 140 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 TMEM78Q5T7P6 136 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 FAM159AQ6UWV7 190 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 HIST1H2BLQ99880 126 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 NDUFAF3Q9BU61 184 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 SAMD10Q9BYL1 202 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 NIT2Q9NQR4 276 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 LENEPQ9Y5L5 61 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 LRP1BQ9NZR2 4599 aa5.19□□□□□ -1.58
LINC01088-207ENST00000511241 H3BMM0 161 aa5.18□□□□□ -1.58
LINC01088-207ENST00000511241 M0R3E3 92 aa5.18□□□□□ -1.58
LINC01088-207ENST00000511241 PRB4P10163 310 aaPredicted RBP5.18□□□□□ -1.58
LINC01088-207ENST00000511241 ZNF138P52744 262 aa5.18□□□□□ -1.58
LINC01088-207ENST00000511241 HIST1H1AQ02539 215 aaPredicted RBP5.18□□□□□ -1.58
LINC01088-207ENST00000511241 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms