RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 C9orf118A6NHY6 69 aa12.16□□□□□ -0.46
CLMAT3-201ENST00000510576 TSHBP01222 138 aa12.16□□□□□ -0.46
CLMAT3-201ENST00000510576 RHOHQ15669 191 aa12.16□□□□□ -0.46
CLMAT3-201ENST00000510576 ZNF469Q96JG9 3925 aaPredicted RBP12.16□□□□□ -0.46
CLMAT3-201ENST00000510576 ZNF415Q09FC8 603 aa12.16□□□□□ -0.46
CLMAT3-201ENST00000510576 PMVKQ15126 192 aa12.16□□□□□ -0.46
CLMAT3-201ENST00000510576 A0A1W2PRX2 142 aa12.15□□□□□ -0.46
CLMAT3-201ENST00000510576 NSUN5P1Q3KNT7 163 aa12.15□□□□□ -0.46
CLMAT3-201ENST00000510576 YAE1D1Q9NRH1 226 aa12.15□□□□□ -0.46
CLMAT3-201ENST00000510576 MYO9AB2RTY4 2548 aa12.15□□□□□ -0.46
CLMAT3-201ENST00000510576 E9PLD3 99 aa12.14□□□□□ -0.47
CLMAT3-201ENST00000510576 PAPPA-AS1Q5QFB9 102 aa12.14□□□□□ -0.47
CLMAT3-201ENST00000510576 C11orf44Q8N8P7 122 aa12.14□□□□□ -0.47
CLMAT3-201ENST00000510576 TLN2Q9Y4G6 2542 aa12.14□□□□□ -0.47
CLMAT3-201ENST00000510576 TRAV25A0A0B4J276 109 aa12.14□□□□□ -0.47
CLMAT3-201ENST00000510576 M0R2P5 195 aa12.14□□□□□ -0.47
CLMAT3-201ENST00000510576 CD28P10747 220 aa12.14□□□□□ -0.47
CLMAT3-201ENST00000510576 FXYD2P54710 66 aa12.14□□□□□ -0.47
CLMAT3-201ENST00000510576 KRTAP1-1Q07627 177 aa12.14□□□□□ -0.47
CLMAT3-201ENST00000510576 FHL3Q13643 280 aa12.14□□□□□ -0.47
CLMAT3-201ENST00000510576 CEND1Q8N111 149 aa12.14□□□□□ -0.47
CLMAT3-201ENST00000510576 OTOGQ6ZRI0 2925 aa12.13□□□□□ -0.47
CLMAT3-201ENST00000510576 MYMXA0A1B0GTQ4 84 aa12.13□□□□□ -0.47
CLMAT3-201ENST00000510576 I3L3M4 83 aa12.13□□□□□ -0.47
CLMAT3-201ENST00000510576 CCL24O00175 119 aa12.13□□□□□ -0.47
CLMAT3-201ENST00000510576 INSP01308 110 aa12.13□□□□□ -0.47
CLMAT3-201ENST00000510576 SMIM13P0DJ93 91 aa12.13□□□□□ -0.47
CLMAT3-201ENST00000510576 TAL2Q16559 108 aa12.13□□□□□ -0.47
CLMAT3-201ENST00000510576 RAB37Q96AX2 223 aa12.13□□□□□ -0.47
CLMAT3-201ENST00000510576 CST9LQ9H4G1 147 aa12.13□□□□□ -0.47
CLMAT3-201ENST00000510576 EDA2RQ9HAV5 297 aa12.13□□□□□ -0.47
CLMAT3-201ENST00000510576 IGLV4-69A0A075B6H9 119 aa12.12□□□□□ -0.47
CLMAT3-201ENST00000510576 A8MWV9 139 aa12.12□□□□□ -0.47
CLMAT3-201ENST00000510576 LINC01587Q99440 93 aa12.12□□□□□ -0.47
CLMAT3-201ENST00000510576 LINC00467Q9BRT7 94 aa12.12□□□□□ -0.47
CLMAT3-201ENST00000510576 PRADC1Q9BSG0 188 aa12.12□□□□□ -0.47
CLMAT3-201ENST00000510576 H3BUT2 72 aa12.12□□□□□ -0.47
CLMAT3-201ENST00000510576 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
CLMAT3-201ENST00000510576 TM2D2Q9BX73 214 aa12.12□□□□□ -0.47
CLMAT3-201ENST00000510576 FLNAP21333 2647 aaKnown RBP12.11□□□□□ -0.47
CLMAT3-201ENST00000510576 IGHV3-73A0A0B4J1V6 119 aa12.11□□□□□ -0.47
CLMAT3-201ENST00000510576 C11orf86A6NJI1 115 aa12.11□□□□□ -0.47
CLMAT3-201ENST00000510576 HERVK_113P61574 105 aa12.11□□□□□ -0.47
CLMAT3-201ENST00000510576 PTH2Q96A98 100 aa12.11□□□□□ -0.47
CLMAT3-201ENST00000510576 CLUHP3Q96NS8 147 aa12.11□□□□□ -0.47
CLMAT3-201ENST00000510576 K7EP13 123 aa12.1□□□□□ -0.47
CLMAT3-201ENST00000510576 PRM2P04554 102 aa12.1□□□□□ -0.47
CLMAT3-201ENST00000510576 SONP18583 2426 aaKnown RBP12.1□□□□□ -0.47
CLMAT3-201ENST00000510576 RNASE1P07998 156 aaKnown RBP12.1□□□□□ -0.47
CLMAT3-201ENST00000510576 ODF3L2Q3SX64 289 aa12.1□□□□□ -0.47
CLMAT3-201ENST00000510576 HIST1H4GQ99525 98 aa12.1□□□□□ -0.47
CLMAT3-201ENST00000510576 TSSC4Q9Y5U2 329 aaPredicted RBP12.1□□□□□ -0.47
CLMAT3-201ENST00000510576 NACAE9PAV3 2078 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 GAGE10A6NGK3 116 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 P0DMU3 169 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 FAM231AP0DMU4 169 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 FAM231CP0DMU5 169 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 EMP1P54849 157 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 GTF2H5Q6ZYL4 71 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 STHQ8IWL8 128 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 C20orf203Q8NBC4 194 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 CITED2Q99967 270 aaPredicted RBP12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 NAA38Q9BRA0 125 aaKnown RBP12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 C16orf95Q9H693 158 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 SCGB2A2Q13296 93 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 UFSP1Q6NVU6 142 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 SPXQ9BT56 116 aa12.09□□□□□ -0.47
CLMAT3-201ENST00000510576 ZNF815PA8K554 130 aa12.08□□□□□ -0.48
CLMAT3-201ENST00000510576 PROK1P58294 105 aa12.08□□□□□ -0.48
CLMAT3-201ENST00000510576 C11orf72Q8NBR9 251 aa12.08□□□□□ -0.48
CLMAT3-201ENST00000510576 LINC01006Q8NI28 216 aa12.08□□□□□ -0.48
CLMAT3-201ENST00000510576 NHP2Q9NX24 153 aaKnown RBP12.08□□□□□ -0.48
CLMAT3-201ENST00000510576 TNFRSF18Q9Y5U5 241 aa12.07□□□□□ -0.48
CLMAT3-201ENST00000510576 TRBV7-3A0A075B6L6 115 aa12.07□□□□□ -0.48
CLMAT3-201ENST00000510576 A0A1W2PPM0 123 aa12.07□□□□□ -0.48
CLMAT3-201ENST00000510576 CYSRT1A8MQ03 144 aa12.07□□□□□ -0.48
CLMAT3-201ENST00000510576 RHODO00212 210 aa12.07□□□□□ -0.48
CLMAT3-201ENST00000510576 CFAP126Q5VTH2 177 aa12.07□□□□□ -0.48
CLMAT3-201ENST00000510576 XCL2Q9UBD3 114 aa12.07□□□□□ -0.48
CLMAT3-201ENST00000510576 K7EP34 96 aa12.06□□□□□ -0.48
CLMAT3-201ENST00000510576 K7ERJ3 54 aa12.06□□□□□ -0.48
CLMAT3-201ENST00000510576 TMEM170BQ5T4T1 132 aa12.06□□□□□ -0.48
CLMAT3-201ENST00000510576 MRPL16Q9NX20 251 aaKnown RBP12.05□□□□□ -0.48
CLMAT3-201ENST00000510576 BEAN1Q3B7T3 259 aa12.05□□□□□ -0.48
CLMAT3-201ENST00000510576 SAMD5Q5TGI4 173 aa12.05□□□□□ -0.48
CLMAT3-201ENST00000510576 ZNRF2Q8NHG8 242 aa12.05□□□□□ -0.48
CLMAT3-201ENST00000510576 PHLDA1Q8WV24 401 aaPredicted RBP12.05□□□□□ -0.48
CLMAT3-201ENST00000510576 OPRPNQ99935 248 aaPredicted RBP12.05□□□□□ -0.48
CLMAT3-201ENST00000510576 FABP2P12104 132 aa12.04□□□□□ -0.48
CLMAT3-201ENST00000510576 SCGB1D4Q6XE38 83 aa12.04□□□□□ -0.48
CLMAT3-201ENST00000510576 NFE4Q86UQ8 179 aa12.04□□□□□ -0.48
CLMAT3-201ENST00000510576 ZNF418Q8TF45 676 aaPredicted RBP12.04□□□□□ -0.48
CLMAT3-201ENST00000510576 WNK1Q9H4A3 2382 aa12.03□□□□□ -0.48
CLMAT3-201ENST00000510576 IGLV4-3A0A075B6K6 122 aa12.03□□□□□ -0.48
CLMAT3-201ENST00000510576 RS1O15537 224 aa12.03□□□□□ -0.48
CLMAT3-201ENST00000510576 Q6ZSN1 163 aa12.03□□□□□ -0.48
CLMAT3-201ENST00000510576 VCX2Q9H322 139 aa12.03□□□□□ -0.48
CLMAT3-201ENST00000510576 SPCS1Q9Y6A9 102 aa12.03□□□□□ -0.48
CLMAT3-201ENST00000510576 GAGE12BA1L429 117 aa12.02□□□□□ -0.49
CLMAT3-201ENST00000510576 FOSL1P15407 271 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms