RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 SMKR1H3BMG3 65 aa7.33□□□□□ -1.24
RFC1-211ENST00000509084 NPYP01303 97 aa7.33□□□□□ -1.24
RFC1-211ENST00000509084 RPL36AP83881 106 aaKnown RBP7.33□□□□□ -1.24
RFC1-211ENST00000509084 SLC25A29Q8N8R3 303 aa7.33□□□□□ -1.24
RFC1-211ENST00000509084 NRACQ8N912 160 aa7.33□□□□□ -1.24
RFC1-211ENST00000509084 RPL36ALQ969Q0 106 aaKnown RBP7.33□□□□□ -1.24
RFC1-211ENST00000509084 HHLA3Q9XRX5 114 aa7.33□□□□□ -1.24
RFC1-211ENST00000509084 NACAE9PAV3 2078 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 TRAV10A0A0B4J240 114 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 PRSS47A8MTI9 375 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 F5H768 121 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 HIST1H2BKO60814 126 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 HIST1H2BJP06899 126 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 HTN3P15516 51 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 PMCHP20382 165 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 HIST1H2BOP23527 126 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 HIST1H2BBP33778 126 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 CRYBA4P53673 196 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 HIST1H2BDP58876 126 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 SUMO2P61956 95 aaKnown RBP7.32□□□□□ -1.24
RFC1-211ENST00000509084 HIST1H2BCP62807 126 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 RPL32P62910 135 aaKnown RBP7.32□□□□□ -1.24
RFC1-211ENST00000509084 Q0VG73 95 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 HIST2H2BEQ16778 126 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.32□□□□□ -1.24
RFC1-211ENST00000509084 Q6ZTC4 211 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 Q8N3U1 123 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 C18orf32Q8TCD1 76 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 HIST1H2BHQ93079 126 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 HIST1H2BNQ99877 126 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 HIST1H2BMQ99879 126 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 ST20Q9HBF5 79 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 TNFRSF18Q9Y5U5 241 aa7.32□□□□□ -1.24
RFC1-211ENST00000509084 TRBV7-3A0A075B6L6 115 aa7.31□□□□□ -1.24
RFC1-211ENST00000509084 TCAPO15273 167 aa7.31□□□□□ -1.24
RFC1-211ENST00000509084 HOXA5P20719 270 aa7.31□□□□□ -1.24
RFC1-211ENST00000509084 NANOS2P60321 138 aaKnown RBP7.31□□□□□ -1.24
RFC1-211ENST00000509084 NEXN-AS1Q8NBZ9 246 aa7.31□□□□□ -1.24
RFC1-211ENST00000509084 RPL39LQ96EH5 51 aaKnown RBP7.31□□□□□ -1.24
RFC1-211ENST00000509084 SMIM2Q9BVW6 85 aa7.31□□□□□ -1.24
RFC1-211ENST00000509084 NXT2Q9NPJ8 142 aaKnown RBP7.31□□□□□ -1.24
RFC1-211ENST00000509084 DEFB131BA0A096LNP1 70 aa7.3□□□□□ -1.24
RFC1-211ENST00000509084 SDHAF1A6NFY7 115 aa7.3□□□□□ -1.24
RFC1-211ENST00000509084 H3BNG1 76 aa7.3□□□□□ -1.24
RFC1-211ENST00000509084 K7EMI3 77 aa7.3□□□□□ -1.24
RFC1-211ENST00000509084 EREGO14944 169 aa7.3□□□□□ -1.24
RFC1-211ENST00000509084 PAX4O43316 350 aa7.3□□□□□ -1.24
RFC1-211ENST00000509084 Q6ZSN1 163 aa7.3□□□□□ -1.24
RFC1-211ENST00000509084 SH2D6Q7Z4S9 175 aa7.3□□□□□ -1.24
RFC1-211ENST00000509084 BAGE3Q86Y29 109 aa7.3□□□□□ -1.24
RFC1-211ENST00000509084 PRSS3P2Q8NHM4 247 aa7.3□□□□□ -1.24
RFC1-211ENST00000509084 TMEM70Q9BUB7 260 aa7.3□□□□□ -1.24
RFC1-211ENST00000509084 TRBV27A0A0K0K1C4 114 aa7.29□□□□□ -1.24
RFC1-211ENST00000509084 VCYO14598 125 aa7.29□□□□□ -1.24
RFC1-211ENST00000509084 GAS8-AS1O95177 125 aa7.29□□□□□ -1.24
RFC1-211ENST00000509084 S100A6P06703 90 aa7.29□□□□□ -1.24
RFC1-211ENST00000509084 P0DMU3 169 aa7.29□□□□□ -1.24
RFC1-211ENST00000509084 FAM231AP0DMU4 169 aa7.29□□□□□ -1.24
RFC1-211ENST00000509084 FAM231CP0DMU5 169 aa7.29□□□□□ -1.24
RFC1-211ENST00000509084 POLR2KP53803 58 aaKnown RBP7.29□□□□□ -1.24
RFC1-211ENST00000509084 FA2HQ7L5A8 372 aa7.29□□□□□ -1.24
RFC1-211ENST00000509084 DAZ4Q86SG3 579 aaKnown RBP7.29□□□□□ -1.24
RFC1-211ENST00000509084 Q8N8P6 123 aa7.29□□□□□ -1.24
RFC1-211ENST00000509084 ZNRF2Q8NHG8 242 aa7.29□□□□□ -1.24
RFC1-211ENST00000509084 CHCHD1Q96BP2 118 aaKnown RBP7.29□□□□□ -1.24
RFC1-211ENST00000509084 KIR2DL4Q99706 377 aa7.29□□□□□ -1.24
RFC1-211ENST00000509084 DAZ3Q9NR90 486 aaKnown RBP7.29□□□□□ -1.24
RFC1-211ENST00000509084 TRAV26-1A0A087WT03 109 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 LOC389332A0A1B0GUA5 103 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 GAGE12JA6NER3 117 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 I3L3M4 83 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 GYPEP15421 78 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 UBE2D3P61077 147 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 UBE2D2P62837 147 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 GAGE1Q13065 139 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 GAGE4Q13068 117 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 GAGE5Q13069 117 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 MRPL23Q16540 153 aaKnown RBP7.28□□□□□ -1.24
RFC1-211ENST00000509084 IQCJQ1A5X6 159 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 GAGE13Q4V321 117 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 TMEM97Q5BJF2 176 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 COA6Q5JTJ3 125 aaKnown RBP7.28□□□□□ -1.24
RFC1-211ENST00000509084 XP32Q5T750 250 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 AP5S1Q9NUS5 200 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 ICOSQ9Y6W8 199 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 NBEAL2Q6ZNJ1 2754 aa7.28□□□□□ -1.24
RFC1-211ENST00000509084 LINC00614P0C842 121 aa7.27□□□□□ -1.25
RFC1-211ENST00000509084 LINC00694P0DN24 101 aa7.27□□□□□ -1.25
RFC1-211ENST00000509084 G0S2P27469 103 aa7.27□□□□□ -1.25
RFC1-211ENST00000509084 IFI27P40305 119 aaPredicted RBP7.27□□□□□ -1.25
RFC1-211ENST00000509084 NDUFA6P56556 154 aa7.27□□□□□ -1.25
RFC1-211ENST00000509084 COTL1Q14019 142 aa7.27□□□□□ -1.25
RFC1-211ENST00000509084 C15orf53Q8NAA6 179 aa7.27□□□□□ -1.25
RFC1-211ENST00000509084 PHLDA1Q8WV24 401 aaPredicted RBP7.27□□□□□ -1.25
RFC1-211ENST00000509084 TMA7Q9Y2S6 64 aaKnown RBP7.27□□□□□ -1.25
RFC1-211ENST00000509084 HUWE1Q7Z6Z7 4374 aaKnown RBP7.26□□□□□ -1.25
RFC1-211ENST00000509084 IGLV2-18A0A075B6J9 118 aa7.26□□□□□ -1.25
RFC1-211ENST00000509084 A0A0J9YY99 117 aa7.26□□□□□ -1.25
RFC1-211ENST00000509084 LINC01546A6NGU7 62 aa7.26□□□□□ -1.25
RFC1-211ENST00000509084 LINC01549A6NIU2 74 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms