RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 LCN9Q8WX39 176 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 ZNF625Q96I27 306 aaPredicted RBP1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 PMCHL2Q9BQD1 86 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 FAIMQ9NVQ4 179 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 RABAC1Q9UI14 185 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 ALPK2Q86TB3 2170 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 CEP192Q8TEP8 1941 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 MCM3APO60318 1980 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 ANKRD26Q9UPS8 1709 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 NUMA1Q14980 2115 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 PTPRMP28827 1452 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 PXDNQ92626 1479 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 LRRC37A3O60309 1634 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 BAZ2BQ9UIF8 2168 aaKnown RBP1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 EML5Q05BV3 1969 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 TRBV7-3A0A075B6L6 115 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 UBE2D1P51668 147 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 SMIM11AP58511 58 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 KRTAP12-4P60329 112 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 DEFB103AP81534 67 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 Q6ZQY7 126 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 Q86TA4 180 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 C20orf197Q8N268 126 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 COX7B2Q8TF08 81 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 C10orf82Q8WW14 230 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 TRGV9Q99603 122 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 LIMD2Q9BT23 127 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 DYNLRB1Q9NP97 96 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 LENEPQ9Y5L5 61 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 LINC00312Q9Y6C7 94 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 R4GMQ9 66 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 BLMP54132 1417 aaPredicted RBP1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 PTPRDP23468 1912 aa1.11□□□□□ -2.23
DEPDC1B-204ENST00000509006 HEATR1Q9H583 2144 aaKnown RBP1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 PCDH15Q96QU1 1955 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 KIAA1551Q9HCM1 1747 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 CASKIN1Q8WXD9 1431 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 UACAQ9BZF9 1416 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 UQCRHLA0A096LP55 91 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 SFT2D2O95562 160 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 MT-ATP8P03928 68 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 IGLC1P0CG04 106 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 CCL3L1P16619 93 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 CAV3P56539 151 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 ZNF56Q15929 161 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 SPRNQ5BIV9 151 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 KRTAP13-1Q8IUC0 172 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 FAM167A-AS1Q96KT0 104 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 AMELXQ99217 191 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 PRO1854Q9UHT4 67 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 V9GYH0 126 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 V9GYV3 84 aa1.1□□□□□ -2.23
DEPDC1B-204ENST00000509006 ABCC5O15440 1437 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 TRBV7-7A0A0K0K1E9 115 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 hADV29S1A0JD25 119 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 IGKV2-29A2NJV5 120 aaPredicted RBP1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 TRAPPC2P0DI81 140 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 TRAPPC2BP0DI82 140 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 FAUP35544 74 aaKnown RBP1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 FXYD4P59646 89 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 KLKP1Q107X0 134 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 FXYD3Q14802 87 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 KRTAP13-4Q3LI77 160 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 TMEM170BQ5T4T1 132 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 SERP2Q8N6R1 65 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 S100A13Q99584 98 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 MANBALQ9NQG1 85 aa1.09□□□□□ -2.23
DEPDC1B-204ENST00000509006 TOPAZ1Q8N9V7 1692 aa1.09□□□□□ -2.24
DEPDC1B-204ENST00000509006 PRDM15P57071 1507 aaPredicted RBP1.09□□□□□ -2.24
DEPDC1B-204ENST00000509006 ARHGEF12Q9NZN5 1544 aa1.09□□□□□ -2.24
DEPDC1B-204ENST00000509006 COL5A3P25940 1745 aaPredicted RBP1.09□□□□□ -2.24
DEPDC1B-204ENST00000509006 ABCA3Q99758 1704 aa1.09□□□□□ -2.24
DEPDC1B-204ENST00000509006 ANKRD36BQ8N2N9 1353 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 FN1P02751 2386 aaKnown RBP1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 CHD3Q12873 2000 aaKnown RBP1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 CC2D2AQ9P2K1 1620 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 RRBP1Q9P2E9 1410 aaKnown RBP1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 MYOFQ9NZM1 2061 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 DOCK1Q14185 1865 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 ROBO1Q9Y6N7 1651 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 MED14O60244 1454 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 PLEKHH2Q8IVE3 1493 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 LOC101927531A0A1B0GV80 90 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 FXYD1O00168 92 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 BCE1O60756 84 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 PPP1R17O96001 155 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 APOC3P02656 99 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 TFF1P04155 84 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 EDDM3BP56851 147 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 FXYD6P3P58550 94 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 SPAG11BQ08648 103 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 PEA15Q15121 130 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 SPAG11AQ6PDA7 123 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 LINC00575Q6W349 94 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 TSLPQ969D9 159 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 CACFD1Q9UGQ2 172 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 MYH8P13535 1937 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 ARAP2Q8WZ64 1704 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 DLEC1Q9Y238 1755 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 SPAG17Q6Q759 2223 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms