RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 PRDX2P32119 198 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 SEC61GP60059 68 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 NPC2P61916 151 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 Q1RN00 199 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 S100A7L2Q5SY68 101 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 ATP1A1-AS1Q5TC04 95 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 DUX4L9Q6RFH8 374 aaPredicted RBP3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 GOLT1AQ6ZVE7 132 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 SERP2Q8N6R1 65 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 POM121L12Q8N7R1 296 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 C8orf31Q8N9H6 132 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 FGFBP3Q8TAT2 258 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 DPH3Q96FX2 82 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 METTL26Q96S19 204 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 SRSF8Q9BRL6 282 aaKnown RBP3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 OVOL2Q9BRP0 275 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 CHCHD5Q9BSY4 110 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 LINC00527Q9UJ94 153 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 TANC2Q9HCD6 1990 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 DIDO1Q9BTC0 2240 aaKnown RBP3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 ZNF469Q96JG9 3925 aaPredicted RBP3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 IGKV1OR2-108A0A075B7D4 117 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 TMSB15BA0A087X1C1 80 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 A0A0J9YX75 114 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 TINCRA0A1B0GVN0 87 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 RBAKDNA6NC62 111 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 SDHAF1A6NFY7 115 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 OOSP1A8MZH6 123 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 BCE1O60756 84 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 DLX1P56177 255 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 DEFB133Q30KQ1 61 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 FAM201AQ5SY85 155 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 LYZL1Q6UWQ5 148 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 ZFP2Q6ZN57 461 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 Q6ZQT7 251 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 IL17RELQ6ZVW7 336 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 TMEM141Q96I45 108 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 SLC50A1Q9BRV3 221 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 CXXC4Q9H2H0 198 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 NDUFA4L2Q9NRX3 87 aa3.42□□□□□ -1.86
PDLIM5-211ENST00000508531 PKDREJQ9NTG1 2253 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 ALPK2Q86TB3 2170 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 CSPG4Q6UVK1 2322 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 TRAV12-2A0A075B6T6 113 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 A0A087X002 238 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 A0A0J9YY99 117 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 SPTY2D1-AS1A0A0U1RR47 76 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 C11orf86A6NJI1 115 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 IQCF6A8MYZ5 107 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 USP17L23D6RBM5 183 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 J3QLI3 93 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 M0R381 172 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 NDUFA3O95167 84 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 FSTL3O95633 263 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 IGHV3-30P01768 117 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 IGHV3-33P01772 117 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 IGHV3-30-5P0DP03 117 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 LGALS3P17931 250 aaKnown RBP3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 SSR4P51571 173 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 DSCR10P59022 87 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 HIST1H4AP62805 103 aaKnown RBP3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 RPL18AQ02543 176 aaKnown RBP3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 LOXL1Q08397 574 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 VMA21Q3ZAQ7 101 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 C6orf226Q5I0X4 101 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 ATP5EP2Q5VTU8 51 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 PVRIGQ6DKI7 326 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 LINC00322Q6ZN03 302 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 C5orf38Q86SI9 138 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 MDP1Q86V88 176 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 MAPKAPK5-AS1Q8N8E1 139 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 CCL4L1Q8NHW4 92 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 TMEM167AQ8TBQ9 72 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 TOMM6Q96B49 74 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 VSIG2Q96IQ7 327 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 SCGB3A1Q96QR1 104 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 OPRPNQ99935 248 aaPredicted RBP3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 AGPAT4-IT1Q9H0P7 198 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 JPT2Q9H910 190 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 SERP1Q9Y6X1 66 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 KIAA1549Q9HCM3 1950 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 HCFC1P51610 2035 aa3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 PRRC2AP48634 2157 aaKnown RBP3.41□□□□□ -1.86
PDLIM5-211ENST00000508531 LRP4O75096 1905 aa3.4□□□□□ -1.86
PDLIM5-211ENST00000508531 EML6Q6ZMW3 1958 aa3.4□□□□□ -1.86
PDLIM5-211ENST00000508531 ACANP16112 2415 aa3.4□□□□□ -1.86
PDLIM5-211ENST00000508531 TRBV19A0A075B6N1 114 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 SMIM26A0A096LP01 95 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 A0A0J9YW62 118 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 LOC107984640A0A0U1RRK4 108 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 TEX49A0A1B0GTD5 131 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 M0R3E3 92 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 NDUFC1O43677 76 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 TIMM8AO60220 97 aaPredicted RBP3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 CCL4P13236 92 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 COX6B1P14854 86 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 CD24P25063 80 aa3.4□□□□□ -1.87
PDLIM5-211ENST00000508531 FAM222AQ5U5X8 452 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms