RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SPANXN2Q5MJ10 180 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 CLPSL2Q6UWE3 100 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 FA2HQ7L5A8 372 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 OR5H2Q8NGV7 314 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 TSC22D3Q99576 134 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 TMEM56-RWDD3S4R434 201 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 MEIS3P1A6NDR6 274 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 H3BQ15 152 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 M0R3E3 92 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 WRBO00258 174 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 SLC25A5P05141 298 aaKnown RBP1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 OR10J4P0C629 311 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 OR4E1P0C645 316 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 ORM2P19652 201 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 NUP62P37198 522 aaPredicted RBP1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 SS18Q15532 418 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 C6orf99Q4VX62 202 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 NMSQ5H8A3 153 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 SAMD13Q5VXD3 122 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 LAIR2Q6ISS4 152 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 SPATA24Q86W54 205 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 SUN5Q8TC36 379 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 RNASEH2CQ8TDP1 164 aaKnown RBP1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 C2orf50Q96LR7 162 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 TP53RKQ96S44 253 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 RAB22AQ9UL26 194 aa1.51□□□□□ -2.17
TOPBP1-206ENST00000508524 SMCO3A2RU48 225 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 SNRPGP15A8MWD9 76 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 ZNF73O43830 326 aaPredicted RBP1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 MPDU1O75352 247 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 NDUFS6O75380 124 aaKnown RBP1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 MT2AP02795 61 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 MT1FP04733 61 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 STAG3L3P0CL85 134 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 GADD45AP24522 165 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 TAS2R20P59543 309 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 ARPC4P59998 168 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 RPS25P62851 125 aaKnown RBP1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 C1orf137Q5JT78 98 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 CFAP126Q5VTH2 177 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 PATE2Q6UY27 113 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 FER1L6-AS1Q8NA97 138 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 OR4C5Q8NGB2 326 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 LHFPL5Q8TAF8 219 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 DIRC1Q969H9 104 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 ODF3Q96PU9 254 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 TRGV9Q99603 122 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 MGLLQ99685 303 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 BCL7BQ9BQE9 202 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 ACTR3CQ9C0K3 210 aaPredicted RBP1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 AGPAT4-IT1Q9H0P7 198 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 ATG5Q9H1Y0 275 aa1.5□□□□□ -2.17
TOPBP1-206ENST00000508524 IGKV2-40A0A087WW87 121 aaPredicted RBP1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 TRAV1-1A0A0B4J248 108 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 TRBV6-4A0A1B0GX49 114 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 GPR31O00270 319 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 GNRH2O43555 120 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 IGKV2D-40P01614 121 aaPredicted RBP1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 MT-ND6P03923 174 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 UBE2D1P51668 147 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 GNG2P59768 71 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 UBE2MP61081 183 aaKnown RBP1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 FABP5Q01469 135 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 IL18Q14116 193 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 SPCS2Q15005 226 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 RHOHQ15669 191 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 PHF5AQ7RTV0 110 aaKnown RBP1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 LINC00526Q96FQ7 95 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 AUNIPQ9H7T9 357 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 POMPQ9Y244 141 aa1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 LSM2Q9Y333 95 aaKnown RBP1.49□□□□□ -2.17
TOPBP1-206ENST00000508524 A0A087WX48 190 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 EFCAB10A6NFE3 127 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 FABP12A6NFH5 140 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 CRYM-AS1A6NIL9 109 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 IFITM5A6NNB3 132 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 ANKRD65E5RJM6 399 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 CASQ2O14958 399 aaPredicted RBP1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 IFNA7P01567 189 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 PMP2P02689 132 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 ANGP03950 147 aaKnown RBP1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 IGLC2P0DOY2 106 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 RPL7P18124 248 aaKnown RBP1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 MYL12AP19105 171 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 CBX5P45973 191 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 RAB5CP51148 216 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 AKR1C2P52895 323 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 SPCS3P61009 180 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 Q0VG73 95 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 IDNKQ5T6J7 187 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 OR5H6Q8NGV6 325 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 OR2T35Q8NGX2 323 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 SLC50A1Q9BRV3 221 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 PRADC1Q9BSG0 188 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 TMEM147Q9BVK8 224 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 FAM107BQ9H098 131 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 ENY2Q9NPA8 101 aa1.48□□□□□ -2.17
TOPBP1-206ENST00000508524 ANAPC10Q9UM13 185 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms