RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 C4orf3Q8WVX3 66 aa2.36□□□□□ -2.03
HMGB3P15-201ENST00000507326 RNF5Q99942 180 aa2.36□□□□□ -2.03
HMGB3P15-201ENST00000507326 HIGD2AQ9BW72 106 aa2.36□□□□□ -2.03
HMGB3P15-201ENST00000507326 PLXNA1Q9UIW2 1896 aa2.36□□□□□ -2.03
HMGB3P15-201ENST00000507326 PTPRFP10586 1907 aa2.36□□□□□ -2.03
HMGB3P15-201ENST00000507326 MUC4Q99102 2169 aa2.36□□□□□ -2.03
HMGB3P15-201ENST00000507326 IGLV3-9A0A075B6K5 115 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 A0A087WWC5 75 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 A0A0D9SFI3 127 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 C11orf86A6NJI1 115 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 A6NN06 94 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 E7EUB6 86 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 CCKP06307 115 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 DNAH10OSP0CZ25 163 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 INSL4Q14641 139 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 RHOHQ15669 191 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 SPATA45Q537H7 98 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 C2orf83Q53S99 150 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 HEPN1Q6WQI6 88 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 FP248Q71RG6 208 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 LINC00269Q8N2A0 174 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 Q8N814 137 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 Q8NDZ9 215 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 LINC00574Q9H8X3 128 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 NXT2Q9NPJ8 142 aaKnown RBP2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 NDUFB11Q9NX14 153 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 EXPH5Q8NEV8 1989 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 CASP8AP2Q9UKL3 1982 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 PATJQ8NI35 1801 aa2.35□□□□□ -2.03
HMGB3P15-201ENST00000507326 DIDO1Q9BTC0 2240 aaKnown RBP2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 LOC285556D6RIA3 1793 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 SLX4Q8IY92 1834 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 IGLV4-69A0A075B6H9 119 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 IGKV1OR2-108A0A075B7D4 117 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 A0A096LNJ9 63 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 TRAV1-1A0A0B4J248 108 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 TRAV17A0A0B4J275 112 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 hADV29S1A0JD25 119 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 C17orf98A8MV24 154 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 IBA57-AS1B1ANH7 110 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 CXCL8P10145 99 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 ERHP84090 104 aaKnown RBP2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 TDRG1Q3Y452 100 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 S100A7L2Q5SY68 101 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 BVES-AS1Q5T3Y7 98 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 Q6ZQT0 140 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 ZNF826PQ6ZT77 177 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 SMIM5Q71RC9 77 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 NDUFA11Q86Y39 141 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 MED12LQ86YW9 2145 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 TYMSOSQ8TAI1 123 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 UBALD1Q8TB05 177 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 C20orf78Q9BR46 151 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 TIMM21Q9BVV7 248 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 DYNLRB1Q9NP97 96 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 NDUFA12Q9UI09 145 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 TP53TG3Q9ULZ0 132 aa2.34□□□□□ -2.03
HMGB3P15-201ENST00000507326 LCTP09848 1927 aa2.34□□□□□ -2.04
HMGB3P15-201ENST00000507326 DOCK11Q5JSL3 2073 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 KIAA1549Q9HCM3 1950 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 IGKV1D-37A0A075B6S9 117 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 A0A087WSZ3 146 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 IGKV2D-26A0A0A0MRZ7 120 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 TRAV13-2A0A0B4J235 113 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 MDFIC2A0A1B0GVS7 189 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 TCRBV4S1A1TA0A5B7 111 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 UMAD1C9J7I0 102 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 SYS1-DBNDD2H3BUS1 97 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 CCL16O15467 120 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 COX6CP09669 75 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 RNASE2P10153 161 aaKnown RBP2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 ROMO1P60602 79 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 NNATQ16517 81 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 ETDBQ3ZM63 59 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 C9orf116Q5BN46 136 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 CYP2G1PQ6ZSU1 146 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 ADM2Q7Z4H4 148 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 C1orf64Q8NEQ6 169 aa2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 KLF14Q8TD94 323 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P15-201ENST00000507326 PCNX2A6NKB5 2137 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 HEATR1Q9H583 2144 aaKnown RBP2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 MALRD1Q5VYJ5 2156 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 TRAV23DV6A0A075B6W5 121 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 TRAV10A0A0B4J240 114 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 A8MUU9 505 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 ASAH2BP0C7U1 165 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 SMIM13P0DJ93 91 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 MIFP14174 115 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 C1orf134Q5TEV5 83 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 Q6P435 159 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 ST20-AS1Q8NBB2 130 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 C18orf32Q8TCD1 76 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 PRR34Q9NV39 138 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 TRPM7Q96QT4 1865 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 SDK2Q58EX2 2172 aa2.32□□□□□ -2.04
HMGB3P15-201ENST00000507326 PAPPA2Q9BXP8 1791 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 SCN4AP35499 1836 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 HEATR5BQ9P2D3 2071 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 F2Z2F3 143 aa2.31□□□□□ -2.04
HMGB3P15-201ENST00000507326 H3BUT2 72 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms