RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 PLAC8L1A1L4L8 177 aa8.63□□□□□ -1.03
POLR2J3-211ENST00000506060 GAGE7O76087 117 aa8.63□□□□□ -1.03
POLR2J3-211ENST00000506060 LEPROTL1O95214 131 aa8.63□□□□□ -1.03
POLR2J3-211ENST00000506060 GAGE12FP0CL80 117 aa8.63□□□□□ -1.03
POLR2J3-211ENST00000506060 GAGE12GP0CL81 117 aa8.63□□□□□ -1.03
POLR2J3-211ENST00000506060 GAGE12IP0CL82 117 aa8.63□□□□□ -1.03
POLR2J3-211ENST00000506060 EMP1P54849 157 aa8.63□□□□□ -1.03
POLR2J3-211ENST00000506060 IGHV3-73A0A0B4J1V6 119 aa8.62□□□□□ -1.03
POLR2J3-211ENST00000506060 TRBV10-1A0A0K0K1A3 114 aa8.62□□□□□ -1.03
POLR2J3-211ENST00000506060 SDHAF1A6NFY7 115 aa8.62□□□□□ -1.03
POLR2J3-211ENST00000506060 GAS8-AS1O95177 125 aa8.62□□□□□ -1.03
POLR2J3-211ENST00000506060 FCER1GP30273 86 aa8.62□□□□□ -1.03
POLR2J3-211ENST00000506060 LURAP1LQ8IV03 231 aa8.62□□□□□ -1.03
POLR2J3-211ENST00000506060 C18orf15Q96N68 181 aa8.62□□□□□ -1.03
POLR2J3-211ENST00000506060 TMEM70Q9BUB7 260 aa8.62□□□□□ -1.03
POLR2J3-211ENST00000506060 IGLV2-18A0A075B6J9 118 aa8.61□□□□□ -1.03
POLR2J3-211ENST00000506060 TRGV4A0A0C4DH28 118 aa8.61□□□□□ -1.03
POLR2J3-211ENST00000506060 POLR2KP53803 58 aaKnown RBP8.61□□□□□ -1.03
POLR2J3-211ENST00000506060 KPRPQ5T749 579 aaPredicted RBP8.61□□□□□ -1.03
POLR2J3-211ENST00000506060 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
POLR2J3-211ENST00000506060 NACAE9PAV3 2078 aa8.61□□□□□ -1.03
POLR2J3-211ENST00000506060 IGHV4-28A0A0C4DH34 117 aa8.6□□□□□ -1.03
POLR2J3-211ENST00000506060 TRBV27A0A0K0K1C4 114 aa8.6□□□□□ -1.03
POLR2J3-211ENST00000506060 C20orf202A1L168 122 aa8.6□□□□□ -1.03
POLR2J3-211ENST00000506060 NUDT3O95989 172 aa8.6□□□□□ -1.03
POLR2J3-211ENST00000506060 BTF3P20290 206 aaKnown RBP8.6□□□□□ -1.03
POLR2J3-211ENST00000506060 KRTDAPP60985 99 aa8.6□□□□□ -1.03
POLR2J3-211ENST00000506060 RPL36AP83881 106 aaKnown RBP8.6□□□□□ -1.03
POLR2J3-211ENST00000506060 JOSD1Q15040 202 aaPredicted RBP8.6□□□□□ -1.03
POLR2J3-211ENST00000506060 LINC00612Q8N6U2 182 aa8.6□□□□□ -1.03
POLR2J3-211ENST00000506060 RPL36ALQ969Q0 106 aaKnown RBP8.6□□□□□ -1.03
POLR2J3-211ENST00000506060 ZNF479Q96JC4 524 aa8.6□□□□□ -1.03
POLR2J3-211ENST00000506060 TRBV6-4A0A1B0GX49 114 aa8.59□□□□□ -1.03
POLR2J3-211ENST00000506060 I3L3M4 83 aa8.59□□□□□ -1.03
POLR2J3-211ENST00000506060 K7EQD1 137 aa8.59□□□□□ -1.03
POLR2J3-211ENST00000506060 SCGB1D1O95968 90 aa8.59□□□□□ -1.03
POLR2J3-211ENST00000506060 SPART-AS1P0CW21 52 aa8.59□□□□□ -1.03
POLR2J3-211ENST00000506060 DEFB130BP0DP73 79 aa8.59□□□□□ -1.03
POLR2J3-211ENST00000506060 DEFB130AP0DP74 79 aa8.59□□□□□ -1.03
POLR2J3-211ENST00000506060 PMCHL1Q16048 86 aa8.59□□□□□ -1.03
POLR2J3-211ENST00000506060 PRADC1Q9BSG0 188 aa8.59□□□□□ -1.03
POLR2J3-211ENST00000506060 ATP5LO75964 103 aa8.58□□□□□ -1.04
POLR2J3-211ENST00000506060 DAD1P61803 113 aa8.58□□□□□ -1.04
POLR2J3-211ENST00000506060 RHOHQ15669 191 aa8.58□□□□□ -1.04
POLR2J3-211ENST00000506060 FAM222AQ5U5X8 452 aa8.58□□□□□ -1.04
POLR2J3-211ENST00000506060 LINC00518Q8N0U6 118 aa8.58□□□□□ -1.04
POLR2J3-211ENST00000506060 Q8NAQ8 132 aa8.58□□□□□ -1.04
POLR2J3-211ENST00000506060 C12orf57Q99622 126 aa8.58□□□□□ -1.04
POLR2J3-211ENST00000506060 S100A12P80511 92 aa8.57□□□□□ -1.04
POLR2J3-211ENST00000506060 PYY3Q5JQD4 70 aa8.57□□□□□ -1.04
POLR2J3-211ENST00000506060 PET117Q6UWS5 81 aa8.57□□□□□ -1.04
POLR2J3-211ENST00000506060 NEXN-AS1Q8NBZ9 246 aa8.57□□□□□ -1.04
POLR2J3-211ENST00000506060 DKK2Q9UBU2 259 aa8.57□□□□□ -1.04
POLR2J3-211ENST00000506060 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
POLR2J3-211ENST00000506060 PKD1L1Q8TDX9 2849 aa8.56□□□□□ -1.04
POLR2J3-211ENST00000506060 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
POLR2J3-211ENST00000506060 C3orf79P0CE67 100 aa8.56□□□□□ -1.04
POLR2J3-211ENST00000506060 COTL1Q14019 142 aa8.56□□□□□ -1.04
POLR2J3-211ENST00000506060 KRTAP21-3Q3LHN1 58 aa8.56□□□□□ -1.04
POLR2J3-211ENST00000506060 DEFB121Q5J5C9 76 aa8.56□□□□□ -1.04
POLR2J3-211ENST00000506060 Q6ZSN1 163 aa8.56□□□□□ -1.04
POLR2J3-211ENST00000506060 DAZ4Q86SG3 579 aaKnown RBP8.56□□□□□ -1.04
POLR2J3-211ENST00000506060 IFI27L1Q96BM0 104 aa8.56□□□□□ -1.04
POLR2J3-211ENST00000506060 SPATA25Q9BR10 227 aa8.56□□□□□ -1.04
POLR2J3-211ENST00000506060 DAZ3Q9NR90 486 aaKnown RBP8.56□□□□□ -1.04
POLR2J3-211ENST00000506060 A0A096LNJ9 63 aa8.55□□□□□ -1.04
POLR2J3-211ENST00000506060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.55□□□□□ -1.04
POLR2J3-211ENST00000506060 SYS1-DBNDD2H3BUS1 97 aa8.55□□□□□ -1.04
POLR2J3-211ENST00000506060 ATP5G1P05496 136 aa8.55□□□□□ -1.04
POLR2J3-211ENST00000506060 SMAGPQ0VAQ4 97 aa8.55□□□□□ -1.04
POLR2J3-211ENST00000506060 SLC25A29Q8N8R3 303 aa8.55□□□□□ -1.04
POLR2J3-211ENST00000506060 TOMM6Q96B49 74 aa8.55□□□□□ -1.04
POLR2J3-211ENST00000506060 C11orf68Q9H3H3 251 aaKnown RBP8.55□□□□□ -1.04
POLR2J3-211ENST00000506060 TRRAPQ9Y4A5 3859 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 P0DMU3 169 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 FAM231AP0DMU4 169 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 FAM231CP0DMU5 169 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 FHL2Q14192 279 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 TMEM97Q5BJF2 176 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 C2orf66Q6UXQ4 117 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 NEGR1Q7Z3B1 354 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 SPATA12Q7Z6I5 190 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 ZNRF2Q8NHG8 242 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 PRO0255Q9UI72 69 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 HHLA3Q9XRX5 114 aa8.54□□□□□ -1.04
POLR2J3-211ENST00000506060 MGAM2Q2M2H8 2515 aa8.53□□□□□ -1.04
POLR2J3-211ENST00000506060 K7EIL1 84 aa8.53□□□□□ -1.04
POLR2J3-211ENST00000506060 DEFB4AO15263 64 aa8.53□□□□□ -1.04
POLR2J3-211ENST00000506060 TSHBP01222 138 aa8.53□□□□□ -1.04
POLR2J3-211ENST00000506060 Q6ZN92 141 aa8.53□□□□□ -1.04
POLR2J3-211ENST00000506060 ERASQ7Z444 233 aa8.53□□□□□ -1.04
POLR2J3-211ENST00000506060 NOTCH1P46531 2555 aa8.53□□□□□ -1.04
POLR2J3-211ENST00000506060 PRSS1P07477 247 aa8.52□□□□□ -1.05
POLR2J3-211ENST00000506060 PAPPA-AS1Q5QFB9 102 aa8.52□□□□□ -1.05
POLR2J3-211ENST00000506060 TMEM141Q96I45 108 aa8.52□□□□□ -1.05
POLR2J3-211ENST00000506060 ZMAT4Q9H898 229 aa8.52□□□□□ -1.05
POLR2J3-211ENST00000506060 GAGE12JA6NER3 117 aa8.51□□□□□ -1.05
POLR2J3-211ENST00000506060 H0Y8G0 127 aa8.51□□□□□ -1.05
POLR2J3-211ENST00000506060 PAX4O43316 350 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms