RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 PRELID3AQ96N28 172 aa8.04□□□□□ -1.12
SGCA-205ENST00000505964 HIST1H2BNQ99877 126 aa8.04□□□□□ -1.12
SGCA-205ENST00000505964 HIST1H2BMQ99879 126 aa8.04□□□□□ -1.12
SGCA-205ENST00000505964 DEFB4AO15263 64 aa8.03□□□□□ -1.12
SGCA-205ENST00000505964 IGHV3-53P01767 116 aa8.03□□□□□ -1.12
SGCA-205ENST00000505964 Q0VG73 95 aa8.03□□□□□ -1.12
SGCA-205ENST00000505964 OR10J3Q5JRS4 329 aa8.03□□□□□ -1.12
SGCA-205ENST00000505964 M0QY20 66 aa8.02□□□□□ -1.13
SGCA-205ENST00000505964 DEFB130BP0DP73 79 aa8.02□□□□□ -1.13
SGCA-205ENST00000505964 DEFB130AP0DP74 79 aa8.02□□□□□ -1.13
SGCA-205ENST00000505964 DAD1P61803 113 aa8.02□□□□□ -1.13
SGCA-205ENST00000505964 NRACQ8N912 160 aa8.02□□□□□ -1.13
SGCA-205ENST00000505964 ZNF479Q96JC4 524 aa8.02□□□□□ -1.13
SGCA-205ENST00000505964 CELA1Q9UNI1 258 aa8.02□□□□□ -1.13
SGCA-205ENST00000505964 TRAV26-2A0A0B4J265 109 aa8.01□□□□□ -1.13
SGCA-205ENST00000505964 TRBV6-5A0A0K0K1A5 114 aa8.01□□□□□ -1.13
SGCA-205ENST00000505964 TRBV6-4A0A1B0GX49 114 aa8.01□□□□□ -1.13
SGCA-205ENST00000505964 PRSS47A8MTI9 375 aa8.01□□□□□ -1.13
SGCA-205ENST00000505964 SMKR1H3BMG3 65 aa8.01□□□□□ -1.13
SGCA-205ENST00000505964 TNFRSF6BO95407 300 aa8.01□□□□□ -1.13
SGCA-205ENST00000505964 NCR2O95944 276 aa8.01□□□□□ -1.13
SGCA-205ENST00000505964 C18orf32Q8TCD1 76 aa8.01□□□□□ -1.13
SGCA-205ENST00000505964 C20orf78Q9BR46 151 aa8.01□□□□□ -1.13
SGCA-205ENST00000505964 IGHV3-73A0A0B4J1V6 119 aa8□□□□□ -1.13
SGCA-205ENST00000505964 A0A0J9YWU9 116 aa8□□□□□ -1.13
SGCA-205ENST00000505964 TRBV10-1A0A0K0K1A3 114 aa8□□□□□ -1.13
SGCA-205ENST00000505964 LOC105371267A0A1B0GV96 52 aa8□□□□□ -1.13
SGCA-205ENST00000505964 GAS8-AS1O95177 125 aa8□□□□□ -1.13
SGCA-205ENST00000505964 NPYP01303 97 aa8□□□□□ -1.13
SGCA-205ENST00000505964 ATP5G1P05496 136 aa8□□□□□ -1.13
SGCA-205ENST00000505964 GATA1P15976 413 aaPredicted RBP8□□□□□ -1.13
SGCA-205ENST00000505964 FHL2Q14192 279 aa8□□□□□ -1.13
SGCA-205ENST00000505964 COA6Q5JTJ3 125 aaKnown RBP8□□□□□ -1.13
SGCA-205ENST00000505964 DNAJC30Q96LL9 226 aa8□□□□□ -1.13
SGCA-205ENST00000505964 MAP1LC3AQ9H492 121 aa8□□□□□ -1.13
SGCA-205ENST00000505964 NIT2Q9NQR4 276 aa8□□□□□ -1.13
SGCA-205ENST00000505964 TRGV4A0A0C4DH28 118 aa7.99□□□□□ -1.13
SGCA-205ENST00000505964 RPL32P62910 135 aaKnown RBP7.99□□□□□ -1.13
SGCA-205ENST00000505964 C12orf74Q32Q52 190 aa7.99□□□□□ -1.13
SGCA-205ENST00000505964 Q6ZSN1 163 aa7.99□□□□□ -1.13
SGCA-205ENST00000505964 K7EQD1 137 aa7.98□□□□□ -1.13
SGCA-205ENST00000505964 S100A6P06703 90 aa7.98□□□□□ -1.13
SGCA-205ENST00000505964 SUMO2P61956 95 aaKnown RBP7.98□□□□□ -1.13
SGCA-205ENST00000505964 RHOHQ15669 191 aa7.98□□□□□ -1.13
SGCA-205ENST00000505964 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
SGCA-205ENST00000505964 SLC25A29Q8N8R3 303 aa7.98□□□□□ -1.13
SGCA-205ENST00000505964 C11orf45Q8TAV5 145 aa7.98□□□□□ -1.13
SGCA-205ENST00000505964 RPL39LQ96EH5 51 aaKnown RBP7.98□□□□□ -1.13
SGCA-205ENST00000505964 ST20Q9HBF5 79 aa7.98□□□□□ -1.13
SGCA-205ENST00000505964 PMCHP20382 165 aa7.97□□□□□ -1.13
SGCA-205ENST00000505964 POLR2KP53803 58 aaKnown RBP7.97□□□□□ -1.13
SGCA-205ENST00000505964 NDUFA6P56556 154 aa7.97□□□□□ -1.13
SGCA-205ENST00000505964 IQCJQ1A5X6 159 aa7.97□□□□□ -1.13
SGCA-205ENST00000505964 Q8N8P6 123 aa7.97□□□□□ -1.13
SGCA-205ENST00000505964 PRADC1Q9BSG0 188 aa7.97□□□□□ -1.13
SGCA-205ENST00000505964 SMIM2Q9BVW6 85 aa7.97□□□□□ -1.13
SGCA-205ENST00000505964 NXT2Q9NPJ8 142 aaKnown RBP7.97□□□□□ -1.13
SGCA-205ENST00000505964 PRO0255Q9UI72 69 aa7.97□□□□□ -1.13
SGCA-205ENST00000505964 HHLA3Q9XRX5 114 aa7.97□□□□□ -1.13
SGCA-205ENST00000505964 TNFRSF18Q9Y5U5 241 aa7.97□□□□□ -1.13
SGCA-205ENST00000505964 LINC01546A6NGU7 62 aa7.96□□□□□ -1.14
SGCA-205ENST00000505964 K7EMI3 77 aa7.96□□□□□ -1.14
SGCA-205ENST00000505964 ESDP10768 282 aa7.96□□□□□ -1.14
SGCA-205ENST00000505964 HOXA5P20719 270 aa7.96□□□□□ -1.14
SGCA-205ENST00000505964 CRYBA4P53673 196 aa7.96□□□□□ -1.14
SGCA-205ENST00000505964 NEXN-AS1Q8NBZ9 246 aa7.96□□□□□ -1.14
SGCA-205ENST00000505964 PRSS3P2Q8NHM4 247 aa7.96□□□□□ -1.14
SGCA-205ENST00000505964 CHCHD1Q96BP2 118 aaKnown RBP7.96□□□□□ -1.14
SGCA-205ENST00000505964 TMEM70Q9BUB7 260 aa7.96□□□□□ -1.14
SGCA-205ENST00000505964 IGLV2-18A0A075B6J9 118 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 TRBV7-3A0A075B6L6 115 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 TRBV27A0A0K0K1C4 114 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 LOC389332A0A1B0GUA5 103 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 SDHAF1A6NFY7 115 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 VCYO14598 125 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 LY6G6CO95867 125 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 LINC00614P0C842 121 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 P0DMU3 169 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 FAM231AP0DMU4 169 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 FAM231CP0DMU5 169 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 IFI27P40305 119 aaPredicted RBP7.95□□□□□ -1.14
SGCA-205ENST00000505964 RPL36AP83881 106 aaKnown RBP7.95□□□□□ -1.14
SGCA-205ENST00000505964 NIT1Q86X76 327 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 LINC00476Q8WZB0 136 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 RPL36ALQ969Q0 106 aaKnown RBP7.95□□□□□ -1.14
SGCA-205ENST00000505964 URB1-AS1Q96HZ7 61 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 VPS13DQ5THJ4 4388 aa7.95□□□□□ -1.14
SGCA-205ENST00000505964 KIAA1109Q2LD37 5005 aa7.94□□□□□ -1.14
SGCA-205ENST00000505964 C5orf52A6NGY3 159 aa7.94□□□□□ -1.14
SGCA-205ENST00000505964 F5H768 121 aa7.94□□□□□ -1.14
SGCA-205ENST00000505964 H3BNG1 76 aa7.94□□□□□ -1.14
SGCA-205ENST00000505964 TCAPO15273 167 aa7.94□□□□□ -1.14
SGCA-205ENST00000505964 SERF1AO75920 110 aa7.94□□□□□ -1.14
SGCA-205ENST00000505964 LINC00310P59036 64 aa7.94□□□□□ -1.14
SGCA-205ENST00000505964 Q6ZTC4 211 aa7.94□□□□□ -1.14
SGCA-205ENST00000505964 FA2HQ7L5A8 372 aa7.94□□□□□ -1.14
SGCA-205ENST00000505964 AP5S1Q9NUS5 200 aa7.94□□□□□ -1.14
SGCA-205ENST00000505964 I3L3M4 83 aa7.93□□□□□ -1.14
SGCA-205ENST00000505964 PAX4O43316 350 aa7.93□□□□□ -1.14
SGCA-205ENST00000505964 LINC00694P0DN24 101 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms