RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 KLK9Q9UKQ9 250 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 ABCA12Q86UK0 2595 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 KNCNA6PVL3 124 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 RNF223E7ERA6 249 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 TRIAP1O43715 76 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 P0DMU3 169 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 FAM231AP0DMU4 169 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 FAM231CP0DMU5 169 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 GPHB5Q86YW7 130 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 SLC25A29Q8N8R3 303 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 Q8N9W7 124 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 DUX5Q96PT3 197 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 PSMG3-AS1Q96PY0 264 aa5.73□□□□□ -1.49
NEDD9-208ENST00000504387 TRAV21A0A0B4J279 112 aa5.72□□□□□ -1.49
NEDD9-208ENST00000504387 UBE2E1P51965 193 aa5.72□□□□□ -1.49
NEDD9-208ENST00000504387 RNASE3P12724 160 aaKnown RBP5.72□□□□□ -1.49
NEDD9-208ENST00000504387 ZFAND2AQ8N6M9 145 aa5.72□□□□□ -1.49
NEDD9-208ENST00000504387 ODF3Q96PU9 254 aa5.72□□□□□ -1.49
NEDD9-208ENST00000504387 CITED1Q99966 193 aa5.72□□□□□ -1.49
NEDD9-208ENST00000504387 VCX2Q9H322 139 aa5.72□□□□□ -1.49
NEDD9-208ENST00000504387 H3BMM0 161 aa5.72□□□□□ -1.49
NEDD9-208ENST00000504387 NPBQ8NG41 125 aa5.72□□□□□ -1.49
NEDD9-208ENST00000504387 UBE2WQ96B02 151 aa5.72□□□□□ -1.49
NEDD9-208ENST00000504387 KLK5Q9Y337 293 aaPredicted RBP5.72□□□□□ -1.49
NEDD9-208ENST00000504387 LRRK2Q5S007 2527 aa5.72□□□□□ -1.49
NEDD9-208ENST00000504387 COX8CQ7Z4L0 72 aa5.71□□□□□ -1.49
NEDD9-208ENST00000504387 PPDPFQ9H3Y8 114 aa5.71□□□□□ -1.49
NEDD9-208ENST00000504387 MDFICQ9P1T7 246 aa5.71□□□□□ -1.49
NEDD9-208ENST00000504387 ID1P41134 155 aa5.71□□□□□ -1.5
NEDD9-208ENST00000504387 PROK1P58294 105 aa5.71□□□□□ -1.5
NEDD9-208ENST00000504387 RNF5Q99942 180 aa5.71□□□□□ -1.5
NEDD9-208ENST00000504387 Q9UF83 564 aa5.71□□□□□ -1.5
NEDD9-208ENST00000504387 CELSR2Q9HCU4 2923 aa5.71□□□□□ -1.5
NEDD9-208ENST00000504387 LOC107984640A0A0U1RRK4 108 aa5.7□□□□□ -1.5
NEDD9-208ENST00000504387 IGIPA6NJ69 53 aa5.7□□□□□ -1.5
NEDD9-208ENST00000504387 ATXN8Q156A1 80 aa5.7□□□□□ -1.5
NEDD9-208ENST00000504387 ZNF876PQ49A33 203 aa5.7□□□□□ -1.5
NEDD9-208ENST00000504387 IGHV3-38A0A0C4DH36 116 aa5.7□□□□□ -1.5
NEDD9-208ENST00000504387 ADAMTSL4-AS1Q5T5F5 129 aa5.7□□□□□ -1.5
NEDD9-208ENST00000504387 MAPK1IP1LQ8NDC0 245 aa5.7□□□□□ -1.5
NEDD9-208ENST00000504387 TMEM263Q8WUH6 116 aaKnown RBP5.7□□□□□ -1.5
NEDD9-208ENST00000504387 UTP20O75691 2785 aaKnown RBP5.7□□□□□ -1.5
NEDD9-208ENST00000504387 K7ENP7 123 aa5.7□□□□□ -1.5
NEDD9-208ENST00000504387 ADORA2A-AS1P86434 159 aa5.7□□□□□ -1.5
NEDD9-208ENST00000504387 C9orf47Q6ZRZ4 202 aa5.7□□□□□ -1.5
NEDD9-208ENST00000504387 TRGV11A0A075B6L2 103 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 FAM236AA0A1B0GUQ0 79 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 BRI3O95415 125 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 JMJD1CQ15652 2540 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 A0A1W2PPR1 153 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 H7C423 109 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 VCYO14598 125 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 PIEZO1Q92508 2521 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 TRAV41A0A0B4J266 112 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 CENPVL3A0A0U1RRI6 287 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 OOSP1A8MZH6 123 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 SPINK13Q1W4C9 94 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 HIST2H2BDQ6DRA6 164 aa5.69□□□□□ -1.5
NEDD9-208ENST00000504387 FLNCQ14315 2725 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 NOTCH2Q04721 2471 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 A0A0J9YXY3 114 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 CD28P10747 220 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 SRSF2Q01130 221 aaKnown RBP5.68□□□□□ -1.5
NEDD9-208ENST00000504387 KHDC1LQ5JSQ8 128 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 AMELXQ99217 191 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 NAV2Q8IVL1 2488 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 ABCA2Q9BZC7 2435 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 M0R1W7 72 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 M0R2P5 195 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 IGHV3-30-3P0DP02 117 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 BLCAPP62952 87 aa5.68□□□□□ -1.5
NEDD9-208ENST00000504387 FAM110DQ8TAY7 271 aaPredicted RBP5.68□□□□□ -1.5
NEDD9-208ENST00000504387 H3BUX3 64 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 NPFFO15130 113 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 HOXD3P31249 432 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-208ENST00000504387 RHPN1-AS1Q9BWJ2 59 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 ICOSQ9Y6W8 199 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 ITPR1Q14643 2758 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 ZANQ9Y493 2812 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-208ENST00000504387 IGHV3-16A0A0C4DH30 117 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 IGKV2-29A2NJV5 120 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-208ENST00000504387 RPL13AP40429 203 aaKnown RBP5.67□□□□□ -1.5
NEDD9-208ENST00000504387 SYNJ2BPP57105 145 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 KLRB1Q12918 225 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 TIMM21Q9BVV7 248 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 TRBV10-2A0A0K0K1G8 114 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 LINC01619G3V211 115 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 LGALS9O00182 355 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 POLR2KP53803 58 aaKnown RBP5.67□□□□□ -1.5
NEDD9-208ENST00000504387 LINC00315P59091 139 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 SBSPONQ8IVN8 264 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 LY6G5BQ8NDX9 201 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 NRGNQ92686 78 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 NDUFA12Q9UI09 145 aa5.67□□□□□ -1.5
NEDD9-208ENST00000504387 PKD1L2Q7Z442 2459 aa5.66□□□□□ -1.5
NEDD9-208ENST00000504387 IGHV4-4A0A075B6R2 117 aa5.66□□□□□ -1.5
NEDD9-208ENST00000504387 TMEM223A0PJW6 202 aa5.66□□□□□ -1.5
NEDD9-208ENST00000504387 NXPH4O95158 308 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms