RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 RBMY1FQ15415 496 aaKnown RBP7.17□□□□□ -1.26
COL1A1-210ENST00000504289 ZNF56Q15929 161 aa7.17□□□□□ -1.26
COL1A1-210ENST00000504289 NSUN5P1Q3KNT7 163 aa7.17□□□□□ -1.26
COL1A1-210ENST00000504289 ZFP2Q6ZN57 461 aa7.17□□□□□ -1.26
COL1A1-210ENST00000504289 DNAJC30Q96LL9 226 aa7.17□□□□□ -1.26
COL1A1-210ENST00000504289 LINC01587Q99440 93 aa7.17□□□□□ -1.26
COL1A1-210ENST00000504289 C1QTNF4Q9BXJ3 329 aa7.17□□□□□ -1.26
COL1A1-210ENST00000504289 DKK2Q9UBU2 259 aa7.17□□□□□ -1.26
COL1A1-210ENST00000504289 SAP30O75446 220 aa7.16□□□□□ -1.26
COL1A1-210ENST00000504289 FGF6P10767 208 aa7.16□□□□□ -1.26
COL1A1-210ENST00000504289 INSL3P51460 131 aa7.16□□□□□ -1.26
COL1A1-210ENST00000504289 CRYBA4P53673 196 aa7.16□□□□□ -1.26
COL1A1-210ENST00000504289 UFSP1Q6NVU6 142 aa7.16□□□□□ -1.26
COL1A1-210ENST00000504289 MORN3Q6PF18 240 aaPredicted RBP7.16□□□□□ -1.26
COL1A1-210ENST00000504289 C11orf72Q8NBR9 251 aa7.16□□□□□ -1.26
COL1A1-210ENST00000504289 NEXN-AS1Q8NBZ9 246 aa7.16□□□□□ -1.26
COL1A1-210ENST00000504289 MCRIP2Q9BUT9 160 aaKnown RBP7.16□□□□□ -1.26
COL1A1-210ENST00000504289 JPT2Q9H910 190 aa7.16□□□□□ -1.26
COL1A1-210ENST00000504289 HIGD1BQ9P298 99 aa7.16□□□□□ -1.26
COL1A1-210ENST00000504289 IGIPA6NJ69 53 aa7.15□□□□□ -1.26
COL1A1-210ENST00000504289 I3L3M4 83 aa7.15□□□□□ -1.26
COL1A1-210ENST00000504289 SPRY2O43597 315 aa7.15□□□□□ -1.26
COL1A1-210ENST00000504289 PCP4P48539 62 aa7.15□□□□□ -1.26
COL1A1-210ENST00000504289 FAM74A4Q5TZK3 123 aa7.15□□□□□ -1.26
COL1A1-210ENST00000504289 CHTOPQ9Y3Y2 248 aaKnown RBP7.15□□□□□ -1.26
COL1A1-210ENST00000504289 ZNF469Q96JG9 3925 aaPredicted RBP7.15□□□□□ -1.26
COL1A1-210ENST00000504289 RS1O15537 224 aa7.14□□□□□ -1.27
COL1A1-210ENST00000504289 SEC11AP67812 179 aa7.14□□□□□ -1.27
COL1A1-210ENST00000504289 STPG4Q8N801 248 aa7.14□□□□□ -1.27
COL1A1-210ENST00000504289 C11orf44Q8N8P7 122 aa7.14□□□□□ -1.27
COL1A1-210ENST00000504289 IL17DQ8TAD2 202 aa7.14□□□□□ -1.27
COL1A1-210ENST00000504289 MRPL35Q9NZE8 188 aaKnown RBP7.14□□□□□ -1.27
COL1A1-210ENST00000504289 IGHV3-53P01767 116 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 ZNF25P17030 456 aaPredicted RBP7.13□□□□□ -1.27
COL1A1-210ENST00000504289 HINT1P49773 126 aaPredicted RBP7.13□□□□□ -1.27
COL1A1-210ENST00000504289 HSD52Q0P140 79 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 DAZ2Q13117 558 aaKnown RBP7.13□□□□□ -1.27
COL1A1-210ENST00000504289 COTL1Q14019 142 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 PMVKQ15126 192 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 TMEM97Q5BJF2 176 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 BVES-AS1Q5T3Y7 98 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 ZC2HC1BQ5TFG8 222 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 CFAP126Q5VTH2 177 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 C2orf91Q6ZV80 131 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 TMEM263Q8WUH6 116 aaKnown RBP7.13□□□□□ -1.27
COL1A1-210ENST00000504289 BAALCQ8WXS3 180 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 TMEM208Q9BTX3 173 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
COL1A1-210ENST00000504289 WNK1Q9H4A3 2382 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 PRSS29PA6NIE9 313 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 BATFQ16520 125 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 KRTAP21-3Q3LHN1 58 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 MPV17L2Q567V2 206 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 C1orf158Q8N1D5 194 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 LINC00482Q8N8I6 264 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 C20orf203Q8NBC4 194 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 ORAOV1Q8WV07 137 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 C19orf73Q9NVV2 129 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 XCL2Q9UBD3 114 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 TP53TG1Q9Y2A0 90 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 TNFRSF18Q9Y5U5 241 aa7.12□□□□□ -1.27
COL1A1-210ENST00000504289 TRBV10-1A0A0K0K1A3 114 aa7.11□□□□□ -1.27
COL1A1-210ENST00000504289 CRLF1O75462 422 aa7.11□□□□□ -1.27
COL1A1-210ENST00000504289 TSHBP01222 138 aa7.11□□□□□ -1.27
COL1A1-210ENST00000504289 PF4P02776 101 aa7.11□□□□□ -1.27
COL1A1-210ENST00000504289 TAL2Q16559 108 aa7.11□□□□□ -1.27
COL1A1-210ENST00000504289 RNASE8Q8TDE3 154 aaKnown RBP7.11□□□□□ -1.27
COL1A1-210ENST00000504289 C16orf74Q96GX8 76 aa7.11□□□□□ -1.27
COL1A1-210ENST00000504289 SMR3AQ99954 134 aa7.11□□□□□ -1.27
COL1A1-210ENST00000504289 NSD1Q96L73 2696 aaPredicted RBP7.1□□□□□ -1.27
COL1A1-210ENST00000504289 A6NDN8 102 aa7.1□□□□□ -1.27
COL1A1-210ENST00000504289 HTN1P15515 57 aa7.1□□□□□ -1.27
COL1A1-210ENST00000504289 NMUP48645 174 aa7.1□□□□□ -1.27
COL1A1-210ENST00000504289 HERVK_113P61574 105 aa7.1□□□□□ -1.27
COL1A1-210ENST00000504289 CST9LQ9H4G1 147 aa7.1□□□□□ -1.27
COL1A1-210ENST00000504289 TRAV4A0A0B4J268 109 aa7.09□□□□□ -1.27
COL1A1-210ENST00000504289 INAFM1C9JVW0 142 aa7.09□□□□□ -1.27
COL1A1-210ENST00000504289 E9PLD3 99 aa7.09□□□□□ -1.27
COL1A1-210ENST00000504289 SMAGPQ0VAQ4 97 aa7.09□□□□□ -1.27
COL1A1-210ENST00000504289 C9orf66Q5T8R8 295 aa7.09□□□□□ -1.27
COL1A1-210ENST00000504289 NFE4Q86UQ8 179 aa7.09□□□□□ -1.27
COL1A1-210ENST00000504289 OR11H2Q8NH07 326 aa7.09□□□□□ -1.27
COL1A1-210ENST00000504289 OVOL2Q9BRP0 275 aa7.09□□□□□ -1.27
COL1A1-210ENST00000504289 SPANXA1Q9NS26 97 aa7.09□□□□□ -1.27
COL1A1-210ENST00000504289 COX11Q9Y6N1 276 aa7.09□□□□□ -1.27
COL1A1-210ENST00000504289 C11orf86A6NJI1 115 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 GIG44P09565 113 aaPredicted RBP7.08□□□□□ -1.28
COL1A1-210ENST00000504289 P0DMU3 169 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 FAM231AP0DMU4 169 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 FAM231CP0DMU5 169 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 AZU1P20160 251 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 KRTAP10-3P60369 221 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 NEGR1Q7Z3B1 354 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 GTSCR1Q86UQ5 136 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 PCP2Q8IVA1 136 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 CSNK1G2-AS1Q8NCQ2 148 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 OR4C5Q8NGB2 326 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 TIMM21Q9BVV7 248 aa7.08□□□□□ -1.28
COL1A1-210ENST00000504289 IGKV2D-26A0A0A0MRZ7 120 aa7.07□□□□□ -1.28
COL1A1-210ENST00000504289 SMIM9A6NGZ8 99 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms