RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 GNLYP22749 145 aa11.06□□□□□ -0.64
SNF8-203ENST00000504000 LINC01600Q96MT4 127 aa11.06□□□□□ -0.64
SNF8-203ENST00000504000 IGLV4-3A0A075B6K6 122 aa11.05□□□□□ -0.64
SNF8-203ENST00000504000 ATP5J2P56134 94 aa11.05□□□□□ -0.64
SNF8-203ENST00000504000 TMEM263Q8WUH6 116 aaKnown RBP11.05□□□□□ -0.64
SNF8-203ENST00000504000 A4D1N5 150 aa11.04□□□□□ -0.64
SNF8-203ENST00000504000 IGHV3-33P01772 117 aa11.04□□□□□ -0.64
SNF8-203ENST00000504000 DSCR9P59020 149 aa11.04□□□□□ -0.64
SNF8-203ENST00000504000 WFDC12Q8WWY7 111 aa11.04□□□□□ -0.64
SNF8-203ENST00000504000 CARD19Q96LW7 228 aa11.04□□□□□ -0.64
SNF8-203ENST00000504000 TRAV12-2A0A075B6T6 113 aa11.04□□□□□ -0.64
SNF8-203ENST00000504000 M0R2P5 195 aa11.04□□□□□ -0.64
SNF8-203ENST00000504000 ZNF418Q8TF45 676 aaPredicted RBP11.04□□□□□ -0.64
SNF8-203ENST00000504000 A8MTW9 85 aa11.03□□□□□ -0.64
SNF8-203ENST00000504000 AVPP01185 164 aa11.03□□□□□ -0.64
SNF8-203ENST00000504000 SCGB1C2P0DMR2 95 aa11.03□□□□□ -0.64
SNF8-203ENST00000504000 MRPS36P82909 103 aaKnown RBP11.03□□□□□ -0.64
SNF8-203ENST00000504000 SPINK13Q1W4C9 94 aa11.03□□□□□ -0.64
SNF8-203ENST00000504000 PTH2Q96A98 100 aa11.03□□□□□ -0.64
SNF8-203ENST00000504000 SPTAN1Q13813 2472 aaKnown RBP11.03□□□□□ -0.64
SNF8-203ENST00000504000 TMEM262E9PQX1 116 aa11.02□□□□□ -0.64
SNF8-203ENST00000504000 OPRPNQ99935 248 aaPredicted RBP11.02□□□□□ -0.64
SNF8-203ENST00000504000 ERG28Q9UKR5 140 aa11.02□□□□□ -0.64
SNF8-203ENST00000504000 ELANEP08246 267 aa11.02□□□□□ -0.65
SNF8-203ENST00000504000 SFTA2Q6UW10 78 aa11.02□□□□□ -0.65
SNF8-203ENST00000504000 AKAP6Q13023 2319 aa11.01□□□□□ -0.65
SNF8-203ENST00000504000 TMEM95Q3KNT9 176 aa11.01□□□□□ -0.65
SNF8-203ENST00000504000 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
SNF8-203ENST00000504000 A0A0J9YXV3 536 aa11□□□□□ -0.65
SNF8-203ENST00000504000 A0A0J9YXY3 114 aa11□□□□□ -0.65
SNF8-203ENST00000504000 IGKV3-20P01619 116 aa11□□□□□ -0.65
SNF8-203ENST00000504000 Q5PR19 223 aa11□□□□□ -0.65
SNF8-203ENST00000504000 Q6ZUT4 128 aa11□□□□□ -0.65
SNF8-203ENST00000504000 MUSTN1Q8IVN3 82 aa11□□□□□ -0.65
SNF8-203ENST00000504000 RNF183Q96D59 192 aa11□□□□□ -0.65
SNF8-203ENST00000504000 UBE2E2Q96LR5 201 aa11□□□□□ -0.65
SNF8-203ENST00000504000 J3QLI3 93 aa11□□□□□ -0.65
SNF8-203ENST00000504000 EIF4EBP3O60516 100 aaPredicted RBP11□□□□□ -0.65
SNF8-203ENST00000504000 IGHV4-59P01825 116 aa11□□□□□ -0.65
SNF8-203ENST00000504000 TRAV2A0A0B4J234 112 aa10.99□□□□□ -0.65
SNF8-203ENST00000504000 TRBV30A0A0K0K1B3 111 aa10.99□□□□□ -0.65
SNF8-203ENST00000504000 SLC25A20O43772 301 aa10.99□□□□□ -0.65
SNF8-203ENST00000504000 SPINK8P0C7L1 97 aa10.99□□□□□ -0.65
SNF8-203ENST00000504000 IGHV3-30-3P0DP02 117 aa10.99□□□□□ -0.65
SNF8-203ENST00000504000 CKS1BP61024 79 aa10.99□□□□□ -0.65
SNF8-203ENST00000504000 FHL3Q13643 280 aa10.99□□□□□ -0.65
SNF8-203ENST00000504000 DEFB112Q30KQ8 113 aa10.99□□□□□ -0.65
SNF8-203ENST00000504000 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
SNF8-203ENST00000504000 ZFHX3Q15911 3703 aa10.99□□□□□ -0.65
SNF8-203ENST00000504000 SYNJ2BPP57105 145 aa10.98□□□□□ -0.65
SNF8-203ENST00000504000 ANKRD29Q8N6D5 301 aa10.98□□□□□ -0.65
SNF8-203ENST00000504000 TIMM21Q9BVV7 248 aa10.98□□□□□ -0.65
SNF8-203ENST00000504000 SPANXDQ9BXN6 97 aa10.98□□□□□ -0.65
SNF8-203ENST00000504000 SPANXA1Q9NS26 97 aa10.98□□□□□ -0.65
SNF8-203ENST00000504000 SPANXCQ9NY87 97 aa10.98□□□□□ -0.65
SNF8-203ENST00000504000 IGHV1-58A0A0C4DH39 117 aa10.98□□□□□ -0.65
SNF8-203ENST00000504000 TINCRA0A1B0GVN0 87 aa10.98□□□□□ -0.65
SNF8-203ENST00000504000 LITAFQ99732 161 aa10.98□□□□□ -0.65
SNF8-203ENST00000504000 CD28P10747 220 aa10.97□□□□□ -0.65
SNF8-203ENST00000504000 HOXD3P31249 432 aaPredicted RBP10.97□□□□□ -0.65
SNF8-203ENST00000504000 ATXN8Q156A1 80 aa10.97□□□□□ -0.65
SNF8-203ENST00000504000 LINC01356Q8N9X3 169 aa10.97□□□□□ -0.65
SNF8-203ENST00000504000 RAX2Q96IS3 184 aa10.97□□□□□ -0.65
SNF8-203ENST00000504000 LINC00467Q9BRT7 94 aa10.97□□□□□ -0.65
SNF8-203ENST00000504000 XGP55808 180 aa10.96□□□□□ -0.65
SNF8-203ENST00000504000 C10orf99Q6UWK7 81 aa10.96□□□□□ -0.65
SNF8-203ENST00000504000 RBMY1A1P0DJD3 496 aaKnown RBP10.95□□□□□ -0.66
SNF8-203ENST00000504000 RBMY1CP0DJD4 496 aa10.95□□□□□ -0.66
SNF8-203ENST00000504000 RBMY1FQ15415 496 aaKnown RBP10.95□□□□□ -0.66
SNF8-203ENST00000504000 DNAJC30Q96LL9 226 aa10.95□□□□□ -0.66
SNF8-203ENST00000504000 TNFRSF18Q9Y5U5 241 aa10.95□□□□□ -0.66
SNF8-203ENST00000504000 C9JAW5 83 aa10.95□□□□□ -0.66
SNF8-203ENST00000504000 MT-ATP8P03928 68 aa10.95□□□□□ -0.66
SNF8-203ENST00000504000 SPXQ9BT56 116 aa10.95□□□□□ -0.66
SNF8-203ENST00000504000 VPREB3Q9UKI3 123 aa10.95□□□□□ -0.66
SNF8-203ENST00000504000 TIMM17BO60830 172 aa10.94□□□□□ -0.66
SNF8-203ENST00000504000 H3BMM0 161 aa10.93□□□□□ -0.66
SNF8-203ENST00000504000 RPL13AP40429 203 aaKnown RBP10.93□□□□□ -0.66
SNF8-203ENST00000504000 LINC01620Q4KN68 170 aa10.93□□□□□ -0.66
SNF8-203ENST00000504000 VSIG2Q96IQ7 327 aa10.93□□□□□ -0.66
SNF8-203ENST00000504000 IGHV3-64A0A075B6Q5 118 aa10.93□□□□□ -0.66
SNF8-203ENST00000504000 ZNF415Q09FC8 603 aa10.93□□□□□ -0.66
SNF8-203ENST00000504000 CHCHD7Q9BUK0 85 aa10.93□□□□□ -0.66
SNF8-203ENST00000504000 UBE2D4Q9Y2X8 147 aa10.93□□□□□ -0.66
SNF8-203ENST00000504000 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.93□□□□□ -0.662e-7■■■□□ 18.6
SNF8-203ENST00000504000 CELSR1Q9NYQ6 3014 aa10.93□□□□□ -0.66
SNF8-203ENST00000504000 TRBV10-2A0A0K0K1G8 114 aa10.92□□□□□ -0.66
SNF8-203ENST00000504000 MIAQ16674 131 aa10.92□□□□□ -0.66
SNF8-203ENST00000504000 GEMIN7Q9H840 131 aaKnown RBP10.92□□□□□ -0.66
SNF8-203ENST00000504000 NDUFA12Q9UI09 145 aa10.92□□□□□ -0.66
SNF8-203ENST00000504000 A0A096LNT2 108 aa10.91□□□□□ -0.66
SNF8-203ENST00000504000 IFITM1P13164 125 aa10.91□□□□□ -0.66
SNF8-203ENST00000504000 BEAN1Q3B7T3 259 aa10.91□□□□□ -0.66
SNF8-203ENST00000504000 ZNF702PQ9H963 129 aa10.91□□□□□ -0.66
SNF8-203ENST00000504000 YAE1D1Q9NRH1 226 aa10.91□□□□□ -0.66
SNF8-203ENST00000504000 FSHBP01225 129 aa10.91□□□□□ -0.66
SNF8-203ENST00000504000 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
SNF8-203ENST00000504000 Q1RN00 199 aa10.91□□□□□ -0.66
SNF8-203ENST00000504000 ZFAND6Q6FIF0 208 aa10.91□□□□□ -0.66
SNF8-203ENST00000504000 Q6YL49 198 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms