RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 C12orf54Q6X4T0 127 aa15.51■□□□□ 0.07
UBE2D3-216ENST00000503742 SPXQ9BT56 116 aa15.51■□□□□ 0.07
UBE2D3-216ENST00000503742 EDA2RQ9HAV5 297 aa15.51■□□□□ 0.07
UBE2D3-216ENST00000503742 CBY1Q9Y3M2 126 aa15.51■□□□□ 0.07
UBE2D3-216ENST00000503742 TRBV27A0A0K0K1C4 114 aa15.51■□□□□ 0.07
UBE2D3-216ENST00000503742 SDHAF1A6NFY7 115 aa15.51■□□□□ 0.07
UBE2D3-216ENST00000503742 UBE2V1Q13404 147 aa15.51■□□□□ 0.07
UBE2D3-216ENST00000503742 NEGR1Q7Z3B1 354 aa15.51■□□□□ 0.07
UBE2D3-216ENST00000503742 A8MWV9 139 aa15.5■□□□□ 0.07
UBE2D3-216ENST00000503742 PTTG1IPP53801 180 aa15.5■□□□□ 0.07
UBE2D3-216ENST00000503742 WFDC10AQ9H1F0 79 aa15.5■□□□□ 0.07
UBE2D3-216ENST00000503742 GIG44P09565 113 aaPredicted RBP15.49■□□□□ 0.07
UBE2D3-216ENST00000503742 AZU1P20160 251 aa15.49■□□□□ 0.07
UBE2D3-216ENST00000503742 C2orf66Q6UXQ4 117 aa15.49■□□□□ 0.07
UBE2D3-216ENST00000503742 NACAE9PAV3 2078 aa15.48■□□□□ 0.07
UBE2D3-216ENST00000503742 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.47■□□□□ 0.07
UBE2D3-216ENST00000503742 ANKRD39Q53RE8 183 aa15.47■□□□□ 0.07
UBE2D3-216ENST00000503742 IL17DQ8TAD2 202 aa15.47■□□□□ 0.07
UBE2D3-216ENST00000503742 ZFP2Q6ZN57 461 aa15.47■□□□□ 0.07
UBE2D3-216ENST00000503742 SCGB3A1Q96QR1 104 aa15.47■□□□□ 0.07
UBE2D3-216ENST00000503742 KIR2DL4Q99706 377 aa15.47■□□□□ 0.07
UBE2D3-216ENST00000503742 CFAP126Q5VTH2 177 aa15.46■□□□□ 0.07
UBE2D3-216ENST00000503742 CCL25O15444 150 aa15.45■□□□□ 0.06
UBE2D3-216ENST00000503742 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.45■□□□□ 0.06
UBE2D3-216ENST00000503742 TP73-AS1Q9UF72 201 aa15.45■□□□□ 0.06
UBE2D3-216ENST00000503742 A0A087WX48 190 aa15.45■□□□□ 0.06
UBE2D3-216ENST00000503742 COX8AP10176 69 aa15.45■□□□□ 0.06
UBE2D3-216ENST00000503742 MPV17L2Q567V2 206 aa15.45■□□□□ 0.06
UBE2D3-216ENST00000503742 RNASE8Q8TDE3 154 aaKnown RBP15.45■□□□□ 0.06
UBE2D3-216ENST00000503742 IGHV3OR16-12A0A075B7B8 117 aa15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 TRAV12-1A0A0B4J245 112 aa15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 H7C1H1 209 aa15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 RIPPLY3P57055 190 aa15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 BVES-AS1Q5T3Y7 98 aa15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 ERASQ7Z444 233 aa15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 MRPL16Q9NX20 251 aaKnown RBP15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 HHLA3Q9XRX5 114 aa15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 IGHV3-73A0A0B4J1V6 119 aa15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 LINC01549A6NIU2 74 aa15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 CYSLTR1Q9Y271 337 aa15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 JMJD1CQ15652 2540 aa15.44■□□□□ 0.06
UBE2D3-216ENST00000503742 IGKCP01834 107 aa15.43■□□□□ 0.06
UBE2D3-216ENST00000503742 CITED1Q99966 193 aa15.43■□□□□ 0.06
UBE2D3-216ENST00000503742 RS1O15537 224 aa15.42■□□□□ 0.06
UBE2D3-216ENST00000503742 DPM2O94777 84 aa15.42■□□□□ 0.06
UBE2D3-216ENST00000503742 RPL35AP18077 110 aaKnown RBP15.42■□□□□ 0.06
UBE2D3-216ENST00000503742 NEXN-AS1Q8NBZ9 246 aa15.42■□□□□ 0.06
UBE2D3-216ENST00000503742 MRPL35Q9NZE8 188 aaKnown RBP15.42■□□□□ 0.06
UBE2D3-216ENST00000503742 K7EP13 123 aa15.42■□□□□ 0.06
UBE2D3-216ENST00000503742 RHODO00212 210 aa15.42■□□□□ 0.06
UBE2D3-216ENST00000503742 TMEM263Q8WUH6 116 aaKnown RBP15.42■□□□□ 0.06
UBE2D3-216ENST00000503742 INSL3P51460 131 aa15.41■□□□□ 0.06
UBE2D3-216ENST00000503742 CSNK1G2-AS1Q8NCQ2 148 aa15.41■□□□□ 0.06
UBE2D3-216ENST00000503742 SPATA3Q8NHX4 192 aa15.41■□□□□ 0.06
UBE2D3-216ENST00000503742 DEFB104AQ8WTQ1 72 aa15.41■□□□□ 0.06
UBE2D3-216ENST00000503742 TP53TG1Q9Y2A0 90 aa15.41■□□□□ 0.06
UBE2D3-216ENST00000503742 IGIPA6NJ69 53 aa15.4■□□□□ 0.06
UBE2D3-216ENST00000503742 FGF6P10767 208 aa15.4■□□□□ 0.06
UBE2D3-216ENST00000503742 RHOHQ15669 191 aa15.4■□□□□ 0.06
UBE2D3-216ENST00000503742 Q6ZSN1 163 aa15.4■□□□□ 0.06
UBE2D3-216ENST00000503742 BAALCQ8WXS3 180 aa15.4■□□□□ 0.06
UBE2D3-216ENST00000503742 C1QTNF4Q9BXJ3 329 aa15.4■□□□□ 0.06
UBE2D3-216ENST00000503742 I3L3M4 83 aa15.4■□□□□ 0.06
UBE2D3-216ENST00000503742 TSHBP01222 138 aa15.4■□□□□ 0.06
UBE2D3-216ENST00000503742 P0DMU3 169 aa15.4■□□□□ 0.06
UBE2D3-216ENST00000503742 FAM231AP0DMU4 169 aa15.4■□□□□ 0.06
UBE2D3-216ENST00000503742 FAM231CP0DMU5 169 aa15.4■□□□□ 0.06
UBE2D3-216ENST00000503742 F8VRH5 84 aa15.38■□□□□ 0.05
UBE2D3-216ENST00000503742 TAX1BP3O14907 124 aa15.38■□□□□ 0.05
UBE2D3-216ENST00000503742 IGHV3-53P01767 116 aa15.38■□□□□ 0.05
UBE2D3-216ENST00000503742 C9orf66Q5T8R8 295 aa15.38■□□□□ 0.05
UBE2D3-216ENST00000503742 RPL39P62891 51 aaKnown RBP15.38■□□□□ 0.05
UBE2D3-216ENST00000503742 OR4C5Q8NGB2 326 aa15.38■□□□□ 0.05
UBE2D3-216ENST00000503742 VAMP3Q15836 100 aa15.37■□□□□ 0.05
UBE2D3-216ENST00000503742 TIMM17AQ99595 171 aa15.37■□□□□ 0.05
UBE2D3-216ENST00000503742 PLNP26678 52 aa15.36■□□□□ 0.05
UBE2D3-216ENST00000503742 SEC11AP67812 179 aa15.36■□□□□ 0.05
UBE2D3-216ENST00000503742 Q6ZVH6 145 aa15.36■□□□□ 0.05
UBE2D3-216ENST00000503742 BOD1L2Q8IYS8 172 aa15.36■□□□□ 0.05
UBE2D3-216ENST00000503742 CHTOPQ9Y3Y2 248 aaKnown RBP15.36■□□□□ 0.05
UBE2D3-216ENST00000503742 TMEM141Q96I45 108 aa15.36■□□□□ 0.05
UBE2D3-216ENST00000503742 Q9UF83 564 aa15.36■□□□□ 0.05
UBE2D3-216ENST00000503742 TRGV1A0A0A0MS02 117 aa15.35■□□□□ 0.05
UBE2D3-216ENST00000503742 PLAC8L1A1L4L8 177 aa15.35■□□□□ 0.05
UBE2D3-216ENST00000503742 PRSS29PA6NIE9 313 aa15.35■□□□□ 0.05
UBE2D3-216ENST00000503742 TCTAP57738 103 aa15.35■□□□□ 0.05
UBE2D3-216ENST00000503742 DAZ2Q13117 558 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-216ENST00000503742 ZC2HC1BQ5TFG8 222 aa15.35■□□□□ 0.05
UBE2D3-216ENST00000503742 C2orf91Q6ZV80 131 aa15.35■□□□□ 0.05
UBE2D3-216ENST00000503742 F8P00451 2351 aa15.35■□□□□ 0.05
UBE2D3-216ENST00000503742 C16orf74Q96GX8 76 aa15.35■□□□□ 0.05
UBE2D3-216ENST00000503742 TNFRSF18Q9Y5U5 241 aa15.35■□□□□ 0.05
UBE2D3-216ENST00000503742 TENM1Q9UKZ4 2725 aa15.34■□□□□ 0.05
UBE2D3-216ENST00000503742 C20orf203Q8NBC4 194 aa15.34■□□□□ 0.05
UBE2D3-216ENST00000503742 VWFP04275 2813 aa15.34■□□□□ 0.05
UBE2D3-216ENST00000503742 Q6ZTI0 123 aa15.33■□□□□ 0.05
UBE2D3-216ENST00000503742 GTSCR1Q86UQ5 136 aa15.33■□□□□ 0.05
UBE2D3-216ENST00000503742 DNAJC30Q96LL9 226 aa15.33■□□□□ 0.05
UBE2D3-216ENST00000503742 IGKV2D-26A0A0A0MRZ7 120 aa15.33■□□□□ 0.04
UBE2D3-216ENST00000503742 SIVA1O15304 175 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms