RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 SLC25A29Q8N8R3 303 aa3.35□□□□□ -1.87
TNC-208ENST00000498724 RNF183Q96D59 192 aa3.35□□□□□ -1.87
TNC-208ENST00000498724 TIMM17AQ99595 171 aa3.35□□□□□ -1.87
TNC-208ENST00000498724 AGRNO00468 2067 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 IGHV4OR15-8A0A075B7B6 117 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 A0A087WW49 117 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.34□□□□□ -1.87
TNC-208ENST00000498724 A0A0B4J2C4 111 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 TRBV7-9A0A0J9YWB2 115 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 TRBV6-5A0A0K0K1A5 114 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 A4D1N5 150 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 IGIPA6NJ69 53 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 LINC01548A6NM66 108 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 C9JAW5 83 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 H7C2G1 150 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 J3QQQ9 107 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 SOCS3O14543 225 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 NPFFO15130 113 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 LEPROTO15243 131 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 SNCGO76070 127 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 TSHBP01222 138 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 P0DMU3 169 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 FAM231AP0DMU4 169 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 FAM231CP0DMU5 169 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 RNASE3P12724 160 aaKnown RBP3.34□□□□□ -1.87
TNC-208ENST00000498724 ZFP36P26651 326 aaKnown RBP3.34□□□□□ -1.87
TNC-208ENST00000498724 SAA4P35542 130 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 TSPEAR-AS2P59090 65 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 DEFB1P60022 68 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 RHOHQ15669 191 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 ATXN8Q156A1 80 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 Q1RN00 199 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 KRTAP21-3Q3LHN1 58 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 ZNF876PQ49A33 203 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 C11orf71Q6IPW1 123 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 GPHB5Q86YW7 130 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 APRG1Q8IVJ8 170 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 C5orf56Q8N8D9 126 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 FAM19A4Q96LR4 140 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 SMR3AQ99954 134 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 MOB4Q9Y3A3 225 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 KIF25-AS1Q9Y6Z4 181 aa3.34□□□□□ -1.87
TNC-208ENST00000498724 CCDC168Q8NDH2 2452 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 SETD2Q9BYW2 2564 aaPredicted RBP3.33□□□□□ -1.88
TNC-208ENST00000498724 ANKRD17O75179 2603 aaKnown RBP3.33□□□□□ -1.88
TNC-208ENST00000498724 A0A087WWL8 130 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 TRAV2A0A0B4J234 112 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 TRAV8-4A0A0B4J246 113 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 TMEM223A0PJW6 202 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 SDHAF1A6NFY7 115 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 F6UB75 175 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 LGALS9O00182 355 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 IGHV1-69P01742 117 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 IGHV3-33P01772 117 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 ID1P41134 155 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 POLR2KP53803 58 aaKnown RBP3.33□□□□□ -1.88
TNC-208ENST00000498724 LINC00315P59091 139 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 RPL39P62891 51 aaKnown RBP3.33□□□□□ -1.88
TNC-208ENST00000498724 GAGE2BQ13066 116 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 GAGE5Q13069 117 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 GAGE6Q13070 117 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 ZNF56Q15929 161 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 NSUN5P1Q3KNT7 163 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 LINC01620Q4KN68 170 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 GAGE2EQ4V326 116 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 C19orf54Q5BKX5 351 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 FAM159AQ6UWV7 190 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 UNQ9165/PRO28630Q6UXU0 137 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 ZNRF2Q8NHG8 242 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 TMEM263Q8WUH6 116 aaKnown RBP3.33□□□□□ -1.88
TNC-208ENST00000498724 AJUBAQ96IF1 538 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 RAX2Q96IS3 184 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 CITED1Q99966 193 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 GAGE2DQ9UEU5 116 aa3.33□□□□□ -1.88
TNC-208ENST00000498724 SPG11Q96JI7 2443 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 IGKV3-7A0A075B6H7 116 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 IGHV3-64A0A075B6Q5 118 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 A0A0J9YX75 114 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 TRBV27A0A0K0K1C4 114 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 KLLNB2CW77 178 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 H3BMM0 161 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 H3BUA1 57 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 TRBV12-3P01733 135 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 IGHV4-39P01824 125 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 PF4V1P10720 104 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 ZNF22P17026 224 aaPredicted RBP3.32□□□□□ -1.88
TNC-208ENST00000498724 CRIP2P52943 208 aaPredicted RBP3.32□□□□□ -1.88
TNC-208ENST00000498724 TTC32Q5I0X7 151 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 FAM74A4Q5TZK3 123 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 TRPT1Q86TN4 253 aaKnown RBP3.32□□□□□ -1.88
TNC-208ENST00000498724 TMEM219Q86XT9 240 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 MUSTN1Q8IVN3 82 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 WFDC11Q8NEX6 87 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 DEFB104AQ8WTQ1 72 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 NTN5Q8WTR8 489 aaPredicted RBP3.32□□□□□ -1.88
TNC-208ENST00000498724 UBE2WQ96B02 151 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 USMG5Q96IX5 58 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 AMELXQ99217 191 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 RHPN1-AS1Q9BWJ2 59 aa3.32□□□□□ -1.88
TNC-208ENST00000498724 SS18L2Q9UHA2 77 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms