RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ARFGEF3Q5TH69 2177 aa2.9□□□□□ -1.94
CLTC-209ENST00000498711 A0A0J9YY99 117 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 NCBP2LA6PVI3 153 aaKnown RBP2.9□□□□□ -1.95
CLTC-209ENST00000498711 KLLNB2CW77 178 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 LGALS9O00182 355 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 TSPAN13O95857 204 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 IGHV3-30P01768 117 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 IGF1P05019 195 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 IGHV3-30-5P0DP03 117 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 PRB4P10163 310 aaPredicted RBP2.9□□□□□ -1.95
CLTC-209ENST00000498711 EFNA4P52798 201 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 DEFB113Q30KQ7 82 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 FAM159AQ6UWV7 190 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 Q6ZQT7 251 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 SLC25A29Q8N8R3 303 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 SCGB3A1Q96QR1 104 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
CLTC-209ENST00000498711 GCN1Q92616 2671 aaKnown RBP2.9□□□□□ -1.95
CLTC-209ENST00000498711 IGLV5-37A0A075B6J1 123 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 TRAV26-2A0A0B4J265 109 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 OR11H12B2RN74 326 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 C19orf84I3L1E1 186 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 LMO4P61968 165 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 ATP5G2Q06055 141 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 C2orf66Q6UXQ4 117 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 SH2D6Q7Z4S9 175 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 NDUFA11Q86Y39 141 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 OR11H1Q8NG94 326 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 OR11H2Q8NH07 326 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 PLEKHB2Q96CS7 222 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 HIST1H4GQ99525 98 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 KRTAP17-1Q9BYP8 105 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 UBTD1Q9HAC8 227 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 ZNF256Q9Y2P7 627 aaPredicted RBP2.89□□□□□ -1.95
CLTC-209ENST00000498711 PLCE1Q9P212 2302 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 TRBV20-1A0A075B6N2 111 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 TRBV27A0A0K0K1C4 114 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 K7EMT4 169 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 IGHV1-69P01742 117 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 CRYBA4P53673 196 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 HERV-K104P63124 156 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 ZNF876PQ49A33 203 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 CLEC2AQ6UVW9 174 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 CLEC19AQ6UXS0 136 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 DLX4Q92988 240 aaPredicted RBP2.89□□□□□ -1.95
CLTC-209ENST00000498711 C9orf85Q96MD7 179 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 PRADC1Q9BSG0 188 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 TENM4Q6N022 2769 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 AKAP6Q13023 2319 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 P0DMU3 169 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 FAM231AP0DMU4 169 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 FAM231CP0DMU5 169 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 RNASE4P34096 147 aaKnown RBP2.89□□□□□ -1.95
CLTC-209ENST00000498711 ASIPP42127 132 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 RPL24P83731 157 aaKnown RBP2.89□□□□□ -1.95
CLTC-209ENST00000498711 HES1Q14469 280 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 SPANXN1Q5VSR9 72 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 PTH2Q96A98 100 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 RPL39LQ96EH5 51 aaKnown RBP2.89□□□□□ -1.95
CLTC-209ENST00000498711 USMG5Q96IX5 58 aa2.89□□□□□ -1.95
CLTC-209ENST00000498711 HELZ2Q9BYK8 2649 aaKnown RBP2.88□□□□□ -1.95
CLTC-209ENST00000498711 SPTBN1Q01082 2364 aaKnown RBP2.88□□□□□ -1.95
CLTC-209ENST00000498711 H3BVH4 76 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 NPFFO15130 113 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 CFC1BP0CG36 223 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 CFC1P0CG37 223 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 TCTAP57738 103 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 PMVKQ15126 192 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 RHOHQ15669 191 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 NSUN5P1Q3KNT7 163 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 ETDBQ3ZM63 59 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 ZFP2Q6ZN57 461 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 MTURNQ8N3F0 131 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 ZNF418Q8TF45 676 aaPredicted RBP2.88□□□□□ -1.95
CLTC-209ENST00000498711 PPDPFLQ8WWR9 84 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 ABCA4P78363 2273 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 ZNF469Q96JG9 3925 aaPredicted RBP2.88□□□□□ -1.95
CLTC-209ENST00000498711 PLXNB1O43157 2135 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 TRAV41A0A0B4J266 112 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 A0A0B4J2C4 111 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 TMEM223A0PJW6 202 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 A8MTW9 85 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 G3V318 75 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 M0R2P5 195 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 LEPROTO15243 131 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 IGHV4-31P0DP07 118 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 INSL3P51460 131 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 FHL2Q14192 279 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 DEFB121Q5J5C9 76 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 AMTNQ6UX39 209 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 TEN1Q86WV5 123 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 Q8N1X5 172 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 TMEM263Q8WUH6 116 aaKnown RBP2.88□□□□□ -1.95
CLTC-209ENST00000498711 FAM104AQ969W3 186 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 CITED1Q99966 193 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 GTSF1LQ9H1H1 148 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 MDFICQ9P1T7 246 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 MOB4Q9Y3A3 225 aa2.88□□□□□ -1.95
CLTC-209ENST00000498711 CUBNO60494 3623 aa2.87□□□□□ -1.95
CLTC-209ENST00000498711 A0A1B0GV72 72 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms