RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 IFITM10A6NMD0 228 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 NUPR1O60356 82 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 GAGE7O76087 117 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 GAGE12FP0CL80 117 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 GAGE12GP0CL81 117 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 GAGE12IP0CL82 117 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 SPART-AS1P0CW21 52 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 KRTDAPP60985 99 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 RPL36AP83881 106 aaKnown RBP6.08□□□□□ -1.44
SF3A1-210ENST00000498259 RHOHQ15669 191 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 PMCHL1Q16048 86 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 DEFB135Q30KP9 77 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 FAM19A2Q8N3H0 131 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 RPL36ALQ969Q0 106 aaKnown RBP6.08□□□□□ -1.44
SF3A1-210ENST00000498259 JPT2Q9H910 190 aa6.08□□□□□ -1.44
SF3A1-210ENST00000498259 TENM1Q9UKZ4 2725 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 TRBV6-4A0A1B0GX49 114 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 G3V4G9 280 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 POLR2KP53803 58 aaKnown RBP6.07□□□□□ -1.44
SF3A1-210ENST00000498259 EMP1P54849 157 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 LINC00310P59036 64 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 KRTAP10-11P60412 298 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 TMEM97Q5BJF2 176 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 PAPPA-AS1Q5QFB9 102 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 UFSP1Q6NVU6 142 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 Q6ZTI0 123 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 DAZ4Q86SG3 579 aaKnown RBP6.07□□□□□ -1.44
SF3A1-210ENST00000498259 RPL39LQ96EH5 51 aaKnown RBP6.07□□□□□ -1.44
SF3A1-210ENST00000498259 C12orf57Q99622 126 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 DAZ3Q9NR90 486 aaKnown RBP6.07□□□□□ -1.44
SF3A1-210ENST00000498259 X6R8D5 127 aa6.07□□□□□ -1.44
SF3A1-210ENST00000498259 IGLV2-18A0A075B6J9 118 aa6.06□□□□□ -1.44
SF3A1-210ENST00000498259 TRBV7-3A0A075B6L6 115 aa6.06□□□□□ -1.44
SF3A1-210ENST00000498259 IGHV3-73A0A0B4J1V6 119 aa6.06□□□□□ -1.44
SF3A1-210ENST00000498259 PLAC8L1A1L4L8 177 aa6.06□□□□□ -1.44
SF3A1-210ENST00000498259 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.06□□□□□ -1.44
SF3A1-210ENST00000498259 K7EQD1 137 aa6.06□□□□□ -1.44
SF3A1-210ENST00000498259 PRM2P04554 102 aa6.06□□□□□ -1.44
SF3A1-210ENST00000498259 GATA1P15976 413 aaPredicted RBP6.06□□□□□ -1.44
SF3A1-210ENST00000498259 PET117Q6UWS5 81 aa6.06□□□□□ -1.44
SF3A1-210ENST00000498259 SPATA12Q7Z6I5 190 aa6.06□□□□□ -1.44
SF3A1-210ENST00000498259 LINC00518Q8N0U6 118 aa6.06□□□□□ -1.44
SF3A1-210ENST00000498259 CYSLTR1Q9Y271 337 aa6.06□□□□□ -1.44
SF3A1-210ENST00000498259 HSBP1L1C9JCN9 74 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 SYS1-DBNDD2H3BUS1 97 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 NPSP0C0P6 89 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 DEFB130BP0DP73 79 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 DEFB130AP0DP74 79 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 DAD1P61803 113 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 COTL1Q14019 142 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 KPRPQ5T749 579 aaPredicted RBP6.05□□□□□ -1.44
SF3A1-210ENST00000498259 Q6ZN92 141 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 SH2D6Q7Z4S9 175 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 LINC00612Q8N6U2 182 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 IFI27L1Q96BM0 104 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 URB1-AS1Q96HZ7 61 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 TMEM141Q96I45 108 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 MDFIQ99750 246 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 HHLA3Q9XRX5 114 aa6.05□□□□□ -1.44
SF3A1-210ENST00000498259 MUC4Q99102 2169 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 IGHV4-28A0A0C4DH34 117 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 GAS8-AS1O95177 125 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 ATP5G1P05496 136 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 PRSS1P07477 247 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 C3orf79P0CE67 100 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 KRTAP21-3Q3LHN1 58 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 DEFB121Q5J5C9 76 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 FAM222AQ5U5X8 452 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 ERASQ7Z444 233 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 TOMM6Q96B49 74 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 ZNF479Q96JC4 524 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 SCGB3A1Q96QR1 104 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 SPATA25Q9BR10 227 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 ZMAT4Q9H898 229 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 DKK2Q9UBU2 259 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 PRO0255Q9UI72 69 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 NOTCH3Q9UM47 2321 aa6.04□□□□□ -1.44
SF3A1-210ENST00000498259 PYY3Q5JQD4 70 aa6.03□□□□□ -1.44
SF3A1-210ENST00000498259 C2orf66Q6UXQ4 117 aa6.03□□□□□ -1.44
SF3A1-210ENST00000498259 SLC25A29Q8N8R3 303 aa6.03□□□□□ -1.44
SF3A1-210ENST00000498259 Q8NAQ8 132 aa6.03□□□□□ -1.44
SF3A1-210ENST00000498259 C11orf68Q9H3H3 251 aaKnown RBP6.03□□□□□ -1.44
SF3A1-210ENST00000498259 VWFP04275 2813 aa6.03□□□□□ -1.44
SF3A1-210ENST00000498259 TSTD3H0UI37 97 aa6.02□□□□□ -1.45
SF3A1-210ENST00000498259 CRYBA4P53673 196 aa6.02□□□□□ -1.45
SF3A1-210ENST00000498259 LURAP1LQ8IV03 231 aa6.02□□□□□ -1.45
SF3A1-210ENST00000498259 NEXN-AS1Q8NBZ9 246 aa6.02□□□□□ -1.45
SF3A1-210ENST00000498259 ZNRF2Q8NHG8 242 aa6.02□□□□□ -1.45
SF3A1-210ENST00000498259 TIMM17AQ99595 171 aa6.02□□□□□ -1.45
SF3A1-210ENST00000498259 VAMP8Q9BV40 100 aa6.02□□□□□ -1.45
SF3A1-210ENST00000498259 GTSF1LQ9H1H1 148 aa6.02□□□□□ -1.45
SF3A1-210ENST00000498259 COL6A5A8TX70 2615 aa6.02□□□□□ -1.45
SF3A1-210ENST00000498259 H7C423 109 aa6.01□□□□□ -1.45
SF3A1-210ENST00000498259 PLNP26678 52 aa6.01□□□□□ -1.45
SF3A1-210ENST00000498259 FHL2Q14192 279 aa6.01□□□□□ -1.45
SF3A1-210ENST00000498259 LGALS9CQ6DKI2 356 aa6.01□□□□□ -1.45
SF3A1-210ENST00000498259 SPANXA1Q9NS26 97 aa6.01□□□□□ -1.45
SF3A1-210ENST00000498259 PYGO1Q9Y3Y4 419 aa6.01□□□□□ -1.45
SF3A1-210ENST00000498259 TRBV25-1A0A075B6N4 114 aa6□□□□□ -1.45
SF3A1-210ENST00000498259 A0A096LNJ9 63 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms