RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 FAM222AQ5U5X8 452 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 Q6ZQT7 251 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 Q86TA4 180 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 TMEM183AQ8IXX5 376 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 ZFAND2AQ8N6M9 145 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 ZC2HC1AQ96GY0 325 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 FAM210BQ96KR6 192 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 FAM19A4Q96LR4 140 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 IGF2BP2-AS1Q96M15 143 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 NAT8Q9UHE5 227 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 LENEPQ9Y5L5 61 aa4.44□□□□□ -1.7
VIM-207ENST00000495528 APOBP04114 4563 aaKnown RBP4.43□□□□□ -1.7
VIM-207ENST00000495528 DNAH5Q8TE73 4624 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 C7orf71A4D174 169 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 TMEM189A5PLL7 270 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 SMIM9A6NGZ8 99 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 A8MTW9 85 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 C9JCJ5 164 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 K7EN84 100 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 CRXO43186 299 aaPredicted RBP4.43□□□□□ -1.7
VIM-207ENST00000495528 PRM2P04554 102 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 HTN1P15515 57 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 CRISP2P16562 243 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 CDKN1BP46527 198 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 RPL23P62829 140 aaKnown RBP4.43□□□□□ -1.7
VIM-207ENST00000495528 BTN1A1Q13410 526 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 ADIRFQ15847 76 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 PRR9Q5T870 116 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 ODF3Q96PU9 254 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 LINC01587Q99440 93 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 NIPSNAP3BQ9BS92 247 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 SEC11CQ9BY50 192 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 JPT2Q9H910 190 aa4.43□□□□□ -1.7
VIM-207ENST00000495528 TRBV7-9A0A0J9YWB2 115 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 KLLNB2CW77 178 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 KRBOX1C9JBD0 128 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 M0R036 132 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 GNRH2O43555 120 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 SH2D1AO60880 128 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 ZNF324O75467 553 aaPredicted RBP4.42□□□□□ -1.7
VIM-207ENST00000495528 APOC3P02656 99 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 ORM1P02763 201 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 ADCYAP1P18509 176 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 MUC21Q5SSG8 566 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 C10orf91Q5T1B1 145 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 FAM162BQ5T6X4 162 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 LINC01551Q86U37 167 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 C1orf158Q8N1D5 194 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 TMEM208Q9BTX3 173 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 RNASE7Q9H1E1 156 aaKnown RBP4.42□□□□□ -1.7
VIM-207ENST00000495528 BIN3Q9NQY0 253 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 NAGKQ9UJ70 344 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 LY96Q9Y6Y9 160 aa4.42□□□□□ -1.7
VIM-207ENST00000495528 HERC1Q15751 4861 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 TMSB15BA0A087X1C1 80 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 TRAV21A0A0B4J279 112 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 GRIFINA4D1Z8 144 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 ZNF705GA8MUZ8 300 aaPredicted RBP4.41□□□□□ -1.7
VIM-207ENST00000495528 GATCO43716 136 aaKnown RBP4.41□□□□□ -1.7
VIM-207ENST00000495528 INSP01308 110 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 PFN1P07737 140 aaKnown RBP4.41□□□□□ -1.7
VIM-207ENST00000495528 Q6AWC8 147 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 FAM159AQ6UWV7 190 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 C6orf223Q8N319 242 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 ISOC2Q96AB3 205 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 SMIM12Q96EX1 92 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 TP53TG3Q9ULZ0 132 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 GOLT1BQ9Y3E0 138 aa4.41□□□□□ -1.7
VIM-207ENST00000495528 IGHV1OR15-1A0A075B7D0 117 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 NBDYA0A0U1RRE5 68 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 TEX48A0A1B0GUV7 120 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 C19orf71A6NCJ1 209 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 B4DEV8 164 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 P01737 135 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 GZMBP10144 247 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 AZU1P20160 251 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 SSTP61278 116 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 DAD1P61803 113 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 RPL19P84098 196 aaKnown RBP4.4□□□□□ -1.71
VIM-207ENST00000495528 RRN3P1Q2M238 152 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 IBA57Q5T440 356 aaKnown RBP4.4□□□□□ -1.71
VIM-207ENST00000495528 C15orf54Q8N8G6 183 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 OR2D3Q8NGH3 330 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 ZNRF2Q8NHG8 242 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 SFRP2Q96HF1 295 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 OCR1Q9BZK8 76 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 OSTCQ9NRP0 149 aa4.4□□□□□ -1.71
VIM-207ENST00000495528 CARHSP1Q9Y2V2 147 aaKnown RBP4.4□□□□□ -1.71
VIM-207ENST00000495528 TIMM8BQ9Y5J9 83 aaPredicted RBP4.4□□□□□ -1.71
VIM-207ENST00000495528 NACAE9PAV3 2078 aa4.39□□□□□ -1.71
VIM-207ENST00000495528 C7orf77A4D0Y5 90 aa4.39□□□□□ -1.71
VIM-207ENST00000495528 H7BYZ3 331 aa4.39□□□□□ -1.71
VIM-207ENST00000495528 SNAPINO95295 136 aa4.39□□□□□ -1.71
VIM-207ENST00000495528 MT-ND4LP03901 98 aa4.39□□□□□ -1.71
VIM-207ENST00000495528 ATRAIDQ6UW56 229 aa4.39□□□□□ -1.71
VIM-207ENST00000495528 FAM231DQ6ZW35 169 aa4.39□□□□□ -1.71
VIM-207ENST00000495528 SPATA12Q7Z6I5 190 aa4.39□□□□□ -1.71
VIM-207ENST00000495528 TMEM256Q8N2U0 113 aa4.39□□□□□ -1.71
VIM-207ENST00000495528 C15orf53Q8NAA6 179 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms