RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
GARNL3-219ENST00000495172 MIXL1Q9H2W2 232 aa4.91□□□□□ -1.62
GARNL3-219ENST00000495172 KMT2DO14686 5537 aa4.91□□□□□ -1.62
GARNL3-219ENST00000495172 IGHV1-24A0A0C4DH33 117 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 ZNF861PO60384 105 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 CST7O76096 145 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 FGF6P10767 208 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 ANXA3P12429 323 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 RPL29P47914 159 aaKnown RBP4.9□□□□□ -1.63
GARNL3-219ENST00000495172 XCL1P47992 114 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 UBE2BP63146 152 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 BAXQ07812 192 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 RNF151Q2KHN1 245 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 PCOTHQ58A44 107 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 CLVS1Q8IUQ0 354 aaPredicted RBP4.9□□□□□ -1.63
GARNL3-219ENST00000495172 OR11H4Q8NGC9 324 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 DYNC2LI1Q8TCX1 351 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 WDR83OSQ9Y284 106 aa4.9□□□□□ -1.63
GARNL3-219ENST00000495172 IGLV4-69A0A075B6H9 119 aa4.89□□□□□ -1.63
GARNL3-219ENST00000495172 OR7C2O60412 319 aa4.89□□□□□ -1.63
GARNL3-219ENST00000495172 UBE2L3P68036 154 aaKnown RBP4.89□□□□□ -1.63
GARNL3-219ENST00000495172 PIK3CD-AS1Q5SR53 167 aa4.89□□□□□ -1.63
GARNL3-219ENST00000495172 NUP35Q8NFH5 326 aa4.89□□□□□ -1.63
GARNL3-219ENST00000495172 CNBD2Q96M20 576 aa4.89□□□□□ -1.63
GARNL3-219ENST00000495172 A0A1B0GUV1 79 aa4.88□□□□□ -1.63
GARNL3-219ENST00000495172 M0R036 132 aa4.88□□□□□ -1.63
GARNL3-219ENST00000495172 AKAIN1P0CW23 69 aa4.88□□□□□ -1.63
GARNL3-219ENST00000495172 CAMPP49913 170 aa4.88□□□□□ -1.63
GARNL3-219ENST00000495172 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
GARNL3-219ENST00000495172 COX6B2Q6YFQ2 88 aa4.88□□□□□ -1.63
GARNL3-219ENST00000495172 ZNF471Q9BX82 626 aaPredicted RBP4.88□□□□□ -1.63
GARNL3-219ENST00000495172 IL36BQ9NZH7 164 aa4.88□□□□□ -1.63
GARNL3-219ENST00000495172 OR5AC2Q9NZP5 309 aa4.88□□□□□ -1.63
GARNL3-219ENST00000495172 EXTL2Q9UBQ6 330 aa4.88□□□□□ -1.63
GARNL3-219ENST00000495172 PKIGQ9Y2B9 76 aa4.88□□□□□ -1.63
GARNL3-219ENST00000495172 C7orf66A4D0T2 115 aa4.87□□□□□ -1.63
GARNL3-219ENST00000495172 APOMO95445 188 aa4.87□□□□□ -1.63
GARNL3-219ENST00000495172 FGF7P21781 194 aa4.87□□□□□ -1.63
GARNL3-219ENST00000495172 PPP1R1AQ13522 171 aa4.87□□□□□ -1.63
GARNL3-219ENST00000495172 PRRT1Q99946 306 aa4.87□□□□□ -1.63
GARNL3-219ENST00000495172 TMEM243Q9BU79 118 aa4.87□□□□□ -1.63
GARNL3-219ENST00000495172 GGACTQ9BVM4 153 aa4.87□□□□□ -1.63
GARNL3-219ENST00000495172 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
GARNL3-219ENST00000495172 TMSB15BA0A087X1C1 80 aa4.86□□□□□ -1.63
GARNL3-219ENST00000495172 IGHV1-58A0A0C4DH39 117 aa4.86□□□□□ -1.63
GARNL3-219ENST00000495172 MUC21A0A140T8X8 626 aa4.86□□□□□ -1.63
GARNL3-219ENST00000495172 M0QXV9 152 aa4.86□□□□□ -1.63
GARNL3-219ENST00000495172 RAB4BP61018 213 aa4.86□□□□□ -1.63
GARNL3-219ENST00000495172 CMTM2Q8TAZ6 248 aa4.86□□□□□ -1.63
GARNL3-219ENST00000495172 UQCC1Q9NVA1 299 aa4.86□□□□□ -1.63
GARNL3-219ENST00000495172 MCUBQ9NWR8 336 aa4.86□□□□□ -1.63
GARNL3-219ENST00000495172 B4DEV8 164 aa4.85□□□□□ -1.63
GARNL3-219ENST00000495172 CCL25O15444 150 aa4.85□□□□□ -1.63
GARNL3-219ENST00000495172 TMEM127O75204 238 aa4.85□□□□□ -1.63
GARNL3-219ENST00000495172 SSTP61278 116 aa4.85□□□□□ -1.63
GARNL3-219ENST00000495172 SPANXN2Q5MJ10 180 aa4.85□□□□□ -1.63
GARNL3-219ENST00000495172 FP248Q71RG6 208 aaPredicted RBP4.85□□□□□ -1.63
GARNL3-219ENST00000495172 PRNTQ86SH4 94 aa4.85□□□□□ -1.63
GARNL3-219ENST00000495172 OR5A1Q8NGJ0 315 aa4.85□□□□□ -1.63
GARNL3-219ENST00000495172 OTORQ9NRC9 128 aa4.85□□□□□ -1.63
GARNL3-219ENST00000495172 PSG8Q9UQ74 426 aa4.85□□□□□ -1.63
GARNL3-219ENST00000495172 TMA7Q9Y2S6 64 aaKnown RBP4.85□□□□□ -1.63
GARNL3-219ENST00000495172 F5H697 171 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 SFT2D2O95562 160 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 CFC1P0CG37 223 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 NEDD8Q15843 81 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 SMUG1Q53HV7 270 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 TMEM97Q5BJF2 176 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 LINC00242Q5T6M2 205 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 C3orf22Q8N5N4 141 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.84□□□□□ -1.63
GARNL3-219ENST00000495172 CAMK2N2Q96S95 79 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 NDFIP1Q9BT67 221 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 CTDSP1Q9GZU7 261 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 WFDC1Q9HC57 220 aa4.84□□□□□ -1.63
GARNL3-219ENST00000495172 KRBOX1C9JBD0 128 aa4.83□□□□□ -1.64
GARNL3-219ENST00000495172 BCAP31P51572 246 aa4.83□□□□□ -1.64
GARNL3-219ENST00000495172 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
GARNL3-219ENST00000495172 TMEM128Q5BJH2 165 aa4.83□□□□□ -1.64
GARNL3-219ENST00000495172 THAP6Q8TBB0 222 aa4.83□□□□□ -1.64
GARNL3-219ENST00000495172 NPCDR1Q9BY65 106 aa4.83□□□□□ -1.64
GARNL3-219ENST00000495172 GSKIPQ9P0R6 139 aa4.83□□□□□ -1.64
GARNL3-219ENST00000495172 MBD2Q9UBB5 411 aa4.83□□□□□ -1.64
GARNL3-219ENST00000495172 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
GARNL3-219ENST00000495172 TRAV6A0A075B6T7 132 aa4.82□□□□□ -1.64
GARNL3-219ENST00000495172 RPL12P30050 165 aaKnown RBP4.82□□□□□ -1.64
GARNL3-219ENST00000495172 CRIP1P50238 77 aa4.82□□□□□ -1.64
GARNL3-219ENST00000495172 GABARAPL2P60520 117 aa4.82□□□□□ -1.64
GARNL3-219ENST00000495172 NCS1P62166 190 aa4.82□□□□□ -1.64
GARNL3-219ENST00000495172 GAGE2EQ4V326 116 aa4.82□□□□□ -1.64
GARNL3-219ENST00000495172 OR5C1Q8NGR4 320 aa4.82□□□□□ -1.64
GARNL3-219ENST00000495172 VCXQ9H320 206 aa4.82□□□□□ -1.64
GARNL3-219ENST00000495172 GAGE2DQ9UEU5 116 aa4.82□□□□□ -1.64
GARNL3-219ENST00000495172 SCP2D1Q9UJQ7 156 aa4.82□□□□□ -1.64
GARNL3-219ENST00000495172 BLOC1S6Q9UL45 172 aa4.82□□□□□ -1.64
GARNL3-219ENST00000495172 TRAV34A0A0B4J273 112 aa4.81□□□□□ -1.64
GARNL3-219ENST00000495172 UBE2L6O14933 153 aa4.81□□□□□ -1.64
GARNL3-219ENST00000495172 BCL2L11O43521 198 aa4.81□□□□□ -1.64
GARNL3-219ENST00000495172 TPT1P13693 172 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms