RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 MORN3Q6PF18 240 aaPredicted RBP11.85□□□□□ -0.51
CBX4-204ENST00000495122 C14orf144Q96I85 54 aa11.85□□□□□ -0.51
CBX4-204ENST00000495122 C1QTNF4Q9BXJ3 329 aa11.85□□□□□ -0.51
CBX4-204ENST00000495122 RHODO00212 210 aa11.84□□□□□ -0.51
CBX4-204ENST00000495122 VCYO14598 125 aa11.84□□□□□ -0.51
CBX4-204ENST00000495122 CRYGDP07320 174 aa11.84□□□□□ -0.51
CBX4-204ENST00000495122 LINC01587Q99440 93 aa11.84□□□□□ -0.51
CBX4-204ENST00000495122 B9D2Q9BPU9 175 aa11.84□□□□□ -0.51
CBX4-204ENST00000495122 POLR2KP53803 58 aaKnown RBP11.83□□□□□ -0.52
CBX4-204ENST00000495122 FXYD7P58549 80 aa11.83□□□□□ -0.52
CBX4-204ENST00000495122 ZNF124Q15973 351 aa11.83□□□□□ -0.52
CBX4-204ENST00000495122 C9orf66Q5T8R8 295 aa11.83□□□□□ -0.52
CBX4-204ENST00000495122 ZMAT5Q9UDW3 170 aaKnown RBP11.83□□□□□ -0.52
CBX4-204ENST00000495122 GOLT1BQ9Y3E0 138 aa11.83□□□□□ -0.52
CBX4-204ENST00000495122 AGRNO00468 2067 aa11.83□□□□□ -0.52
CBX4-204ENST00000495122 TRBV27A0A0K0K1C4 114 aa11.82□□□□□ -0.52
CBX4-204ENST00000495122 F5H697 171 aa11.82□□□□□ -0.52
CBX4-204ENST00000495122 NUDT3O95989 172 aa11.82□□□□□ -0.52
CBX4-204ENST00000495122 TOMM6Q96B49 74 aa11.82□□□□□ -0.52
CBX4-204ENST00000495122 KIR2DL4Q99706 377 aa11.82□□□□□ -0.52
CBX4-204ENST00000495122 PMCHL2Q9BQD1 86 aa11.82□□□□□ -0.52
CBX4-204ENST00000495122 M0QY20 66 aa11.81□□□□□ -0.52
CBX4-204ENST00000495122 ZNF56Q15929 161 aa11.81□□□□□ -0.52
CBX4-204ENST00000495122 ATOH7Q8N100 152 aa11.81□□□□□ -0.52
CBX4-204ENST00000495122 C11orf72Q8NBR9 251 aa11.81□□□□□ -0.52
CBX4-204ENST00000495122 RPL39LQ96EH5 51 aaKnown RBP11.81□□□□□ -0.52
CBX4-204ENST00000495122 CSTL1Q9H114 145 aa11.81□□□□□ -0.52
CBX4-204ENST00000495122 RYR3Q15413 4870 aa11.8□□□□□ -0.52
CBX4-204ENST00000495122 A0A087WWL8 130 aa11.8□□□□□ -0.52
CBX4-204ENST00000495122 TRAV12-1A0A0B4J245 112 aa11.8□□□□□ -0.52
CBX4-204ENST00000495122 SPRY2O43597 315 aa11.8□□□□□ -0.52
CBX4-204ENST00000495122 RHOHQ15669 191 aa11.8□□□□□ -0.52
CBX4-204ENST00000495122 C19orf73Q9NVV2 129 aa11.8□□□□□ -0.52
CBX4-204ENST00000495122 MRPS16Q9Y3D3 137 aaKnown RBP11.8□□□□□ -0.52
CBX4-204ENST00000495122 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.79□□□□□ -0.52
CBX4-204ENST00000495122 M0R143 59 aa11.79□□□□□ -0.52
CBX4-204ENST00000495122 ZFP2Q6ZN57 461 aa11.79□□□□□ -0.52
CBX4-204ENST00000495122 IL17DQ8TAD2 202 aa11.79□□□□□ -0.52
CBX4-204ENST00000495122 TMEM208Q9BTX3 173 aa11.79□□□□□ -0.52
CBX4-204ENST00000495122 ZMAT4Q9H898 229 aa11.79□□□□□ -0.52
CBX4-204ENST00000495122 JPT2Q9H910 190 aa11.79□□□□□ -0.52
CBX4-204ENST00000495122 TENM3Q9P273 2699 aa11.79□□□□□ -0.52
CBX4-204ENST00000495122 SDHAF1A6NFY7 115 aa11.78□□□□□ -0.52
CBX4-204ENST00000495122 PRSS1P07477 247 aa11.78□□□□□ -0.52
CBX4-204ENST00000495122 FAM74A4Q5TZK3 123 aa11.78□□□□□ -0.52
CBX4-204ENST00000495122 TMEM263Q8WUH6 116 aaKnown RBP11.78□□□□□ -0.52
CBX4-204ENST00000495122 C2orf88Q9BSF0 95 aa11.78□□□□□ -0.52
CBX4-204ENST00000495122 CYSLTR1Q9Y271 337 aa11.78□□□□□ -0.52
CBX4-204ENST00000495122 HUWE1Q7Z6Z7 4374 aaKnown RBP11.78□□□□□ -0.52
CBX4-204ENST00000495122 H0Y8G0 127 aa11.77□□□□□ -0.53
CBX4-204ENST00000495122 RS1O15537 224 aa11.77□□□□□ -0.53
CBX4-204ENST00000495122 CIDEAO60543 219 aa11.77□□□□□ -0.53
CBX4-204ENST00000495122 HNRNPA3P51991 378 aaKnown RBP11.77□□□□□ -0.53
CBX4-204ENST00000495122 ODF1Q14990 250 aa11.77□□□□□ -0.53
CBX4-204ENST00000495122 UFSP1Q6NVU6 142 aa11.77□□□□□ -0.53
CBX4-204ENST00000495122 Q6ZN92 141 aa11.77□□□□□ -0.53
CBX4-204ENST00000495122 ERASQ7Z444 233 aa11.77□□□□□ -0.53
CBX4-204ENST00000495122 C1orf158Q8N1D5 194 aa11.77□□□□□ -0.53
CBX4-204ENST00000495122 DNAJC30Q96LL9 226 aa11.77□□□□□ -0.53
CBX4-204ENST00000495122 XCL2Q9UBD3 114 aa11.77□□□□□ -0.53
CBX4-204ENST00000495122 SLC25A34Q6PIV7 304 aa11.76□□□□□ -0.53
CBX4-204ENST00000495122 C2orf66Q6UXQ4 117 aa11.76□□□□□ -0.53
CBX4-204ENST00000495122 TMEM141Q96I45 108 aa11.76□□□□□ -0.53
CBX4-204ENST00000495122 SCGB3A1Q96QR1 104 aa11.76□□□□□ -0.53
CBX4-204ENST00000495122 DNAH7Q8WXX0 4024 aa11.76□□□□□ -0.53
CBX4-204ENST00000495122 A0A087WX48 190 aa11.75□□□□□ -0.53
CBX4-204ENST00000495122 DPM2O94777 84 aa11.75□□□□□ -0.53
CBX4-204ENST00000495122 PLNP26678 52 aa11.75□□□□□ -0.53
CBX4-204ENST00000495122 MAJINQ3KP22 176 aa11.75□□□□□ -0.53
CBX4-204ENST00000495122 C16orf74Q96GX8 76 aa11.75□□□□□ -0.53
CBX4-204ENST00000495122 C18orf15Q96N68 181 aa11.75□□□□□ -0.53
CBX4-204ENST00000495122 WWC2-AS2Q96NR7 200 aa11.75□□□□□ -0.53
CBX4-204ENST00000495122 TIMM17AQ99595 171 aa11.75□□□□□ -0.53
CBX4-204ENST00000495122 STAB2Q8WWQ8 2551 aa11.74□□□□□ -0.53
CBX4-204ENST00000495122 hDV102S1A0JD36 115 aa11.74□□□□□ -0.53
CBX4-204ENST00000495122 I3L3M4 83 aa11.74□□□□□ -0.53
CBX4-204ENST00000495122 IGKCP01834 107 aa11.74□□□□□ -0.53
CBX4-204ENST00000495122 HTN1P15515 57 aa11.74□□□□□ -0.53
CBX4-204ENST00000495122 DAZ2Q13117 558 aaKnown RBP11.74□□□□□ -0.53
CBX4-204ENST00000495122 CFAP126Q5VTH2 177 aa11.74□□□□□ -0.53
CBX4-204ENST00000495122 GTSCR1Q86UQ5 136 aa11.74□□□□□ -0.53
CBX4-204ENST00000495122 RNASE8Q8TDE3 154 aaKnown RBP11.74□□□□□ -0.53
CBX4-204ENST00000495122 DLEU1O43261 78 aa11.73□□□□□ -0.53
CBX4-204ENST00000495122 IGHV3-53P01767 116 aa11.73□□□□□ -0.53
CBX4-204ENST00000495122 NPSP0C0P6 89 aa11.73□□□□□ -0.53
CBX4-204ENST00000495122 NHLRC4P0CG21 123 aaPredicted RBP11.73□□□□□ -0.53
CBX4-204ENST00000495122 COX8AP10176 69 aa11.73□□□□□ -0.53
CBX4-204ENST00000495122 PAPPA-AS1Q5QFB9 102 aa11.72□□□□□ -0.53
CBX4-204ENST00000495122 F8VRH5 84 aa11.71□□□□□ -0.53
CBX4-204ENST00000495122 GIG44P09565 113 aaPredicted RBP11.71□□□□□ -0.53
CBX4-204ENST00000495122 NEXN-AS1Q8NBZ9 246 aa11.71□□□□□ -0.53
CBX4-204ENST00000495122 SNHG12Q9BXW3 62 aa11.71□□□□□ -0.53
CBX4-204ENST00000495122 CSNK1G2-AS1Q8NCQ2 148 aa11.7□□□□□ -0.54
CBX4-204ENST00000495122 DKK2Q9UBU2 259 aa11.7□□□□□ -0.54
CBX4-204ENST00000495122 TNFRSF18Q9Y5U5 241 aa11.7□□□□□ -0.54
CBX4-204ENST00000495122 TRAV4A0A0B4J268 109 aa11.69□□□□□ -0.54
CBX4-204ENST00000495122 TRBV10-1A0A0K0K1A3 114 aa11.69□□□□□ -0.54
CBX4-204ENST00000495122 SIVA1O15304 175 aa11.69□□□□□ -0.54
CBX4-204ENST00000495122 CRYBA4P53673 196 aa11.69□□□□□ -0.54
CBX4-204ENST00000495122 TP53TG1Q9Y2A0 90 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms