RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 ICOSQ9Y6W8 199 aa11.81□□□□□ -0.52
SNX17-209ENST00000494893 FAT2Q9NYQ8 4349 aa11.8□□□□□ -0.52
SNX17-209ENST00000494893 IGHV3-73A0A0B4J1V6 119 aa11.8□□□□□ -0.52
SNX17-209ENST00000494893 UFSP1Q6NVU6 142 aa11.8□□□□□ -0.52
SNX17-209ENST00000494893 Q6ZSN1 163 aa11.8□□□□□ -0.52
SNX17-209ENST00000494893 SAMD10Q9BYL1 202 aa11.8□□□□□ -0.52
SNX17-209ENST00000494893 MRPL18Q9H0U6 180 aaKnown RBP11.8□□□□□ -0.52
SNX17-209ENST00000494893 A8MWV9 139 aa11.79□□□□□ -0.52
SNX17-209ENST00000494893 K7EQD1 137 aa11.79□□□□□ -0.52
SNX17-209ENST00000494893 TRGC2P03986 189 aa11.79□□□□□ -0.52
SNX17-209ENST00000494893 GYPEP15421 78 aa11.79□□□□□ -0.52
SNX17-209ENST00000494893 FABP9Q0Z7S8 132 aa11.79□□□□□ -0.52
SNX17-209ENST00000494893 FAM104BQ5XKR9 115 aa11.79□□□□□ -0.52
SNX17-209ENST00000494893 C14orf178Q8N769 122 aaPredicted RBP11.79□□□□□ -0.52
SNX17-209ENST00000494893 FRZBQ92765 325 aa11.79□□□□□ -0.52
SNX17-209ENST00000494893 DPH3P1Q9H4G8 78 aa11.79□□□□□ -0.52
SNX17-209ENST00000494893 MRPS16Q9Y3D3 137 aaKnown RBP11.79□□□□□ -0.52
SNX17-209ENST00000494893 KIF25-AS1Q9Y6Z4 181 aa11.79□□□□□ -0.52
SNX17-209ENST00000494893 APCSP02743 223 aa11.78□□□□□ -0.52
SNX17-209ENST00000494893 CRYGDP07320 174 aa11.78□□□□□ -0.52
SNX17-209ENST00000494893 AMN1Q8IY45 258 aa11.78□□□□□ -0.52
SNX17-209ENST00000494893 SLC25A29Q8N8R3 303 aa11.78□□□□□ -0.52
SNX17-209ENST00000494893 RNF185Q96GF1 192 aa11.78□□□□□ -0.52
SNX17-209ENST00000494893 PHOX2AO14813 284 aa11.77□□□□□ -0.53
SNX17-209ENST00000494893 SMIM17P0DL12 118 aa11.77□□□□□ -0.53
SNX17-209ENST00000494893 RAB4AP20338 218 aa11.77□□□□□ -0.53
SNX17-209ENST00000494893 LINC00315P59091 139 aa11.77□□□□□ -0.53
SNX17-209ENST00000494893 MRPL23Q16540 153 aaKnown RBP11.77□□□□□ -0.53
SNX17-209ENST00000494893 UPK3BQ9BT76 320 aa11.77□□□□□ -0.53
SNX17-209ENST00000494893 A0A087WWL8 130 aa11.76□□□□□ -0.53
SNX17-209ENST00000494893 LYPD5Q6UWN5 251 aa11.76□□□□□ -0.53
SNX17-209ENST00000494893 ZFP2Q6ZN57 461 aa11.76□□□□□ -0.53
SNX17-209ENST00000494893 Q9UF83 564 aa11.76□□□□□ -0.53
SNX17-209ENST00000494893 TRBV6-4A0A1B0GX49 114 aa11.75□□□□□ -0.53
SNX17-209ENST00000494893 RTL8CO15255 209 aa11.75□□□□□ -0.53
SNX17-209ENST00000494893 CIDEAO60543 219 aa11.75□□□□□ -0.53
SNX17-209ENST00000494893 KIAA1644Q3SXP7 199 aa11.75□□□□□ -0.53
SNX17-209ENST00000494893 MRPL51Q4U2R6 128 aaKnown RBP11.75□□□□□ -0.53
SNX17-209ENST00000494893 KRTAP1-5Q9BYS1 174 aa11.75□□□□□ -0.53
SNX17-209ENST00000494893 Q9H8V8 135 aa11.75□□□□□ -0.53
SNX17-209ENST00000494893 BIRC6Q9NR09 4857 aa11.74□□□□□ -0.53
SNX17-209ENST00000494893 NBDYA0A0U1RRE5 68 aa11.74□□□□□ -0.53
SNX17-209ENST00000494893 C1orf196B1AJZ1 125 aa11.74□□□□□ -0.53
SNX17-209ENST00000494893 RHODO00212 210 aa11.74□□□□□ -0.53
SNX17-209ENST00000494893 SRIP30626 198 aa11.74□□□□□ -0.53
SNX17-209ENST00000494893 FAM74A4Q5TZK3 123 aa11.74□□□□□ -0.53
SNX17-209ENST00000494893 NEGR1Q7Z3B1 354 aa11.74□□□□□ -0.53
SNX17-209ENST00000494893 MGPP08493 103 aa11.73□□□□□ -0.53
SNX17-209ENST00000494893 HECTD4Q9Y4D8 3996 aa11.73□□□□□ -0.53
SNX17-209ENST00000494893 PPBPP02775 128 aa11.72□□□□□ -0.53
SNX17-209ENST00000494893 RHOHQ15669 191 aa11.72□□□□□ -0.53
SNX17-209ENST00000494893 MRAP2Q96G30 205 aa11.72□□□□□ -0.53
SNX17-209ENST00000494893 F5H697 171 aa11.71□□□□□ -0.53
SNX17-209ENST00000494893 LINC00694P0DN24 101 aa11.71□□□□□ -0.53
SNX17-209ENST00000494893 CKS2P33552 79 aa11.71□□□□□ -0.53
SNX17-209ENST00000494893 ZNF56Q15929 161 aa11.71□□□□□ -0.53
SNX17-209ENST00000494893 ORMDL3Q8N138 153 aa11.71□□□□□ -0.53
SNX17-209ENST00000494893 ALKBH7Q9BT30 221 aaPredicted RBP11.71□□□□□ -0.53
SNX17-209ENST00000494893 D6R8Y8 96 aa11.7□□□□□ -0.54
SNX17-209ENST00000494893 SUMO4Q6EEV6 95 aa11.7□□□□□ -0.54
SNX17-209ENST00000494893 PRADC1Q9BSG0 188 aa11.7□□□□□ -0.54
SNX17-209ENST00000494893 TRAV26-2A0A0B4J265 109 aa11.69□□□□□ -0.54
SNX17-209ENST00000494893 SMKR1H3BMG3 65 aa11.69□□□□□ -0.54
SNX17-209ENST00000494893 GAS8-AS1O95177 125 aa11.69□□□□□ -0.54
SNX17-209ENST00000494893 RAB5BP61020 215 aa11.69□□□□□ -0.54
SNX17-209ENST00000494893 PRELID3AQ96N28 172 aa11.69□□□□□ -0.54
SNX17-209ENST00000494893 M0QY20 66 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 HIST1H2BKO60814 126 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 NCR2O95944 276 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 HIST1H2BJP06899 126 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 HIST1H2BOP23527 126 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 HIST1H2BBP33778 126 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 TIRAPP58753 221 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 HIST1H2BDP58876 126 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 HIST1H2BCP62807 126 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 HIST2H2BEQ16778 126 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.68□□□□□ -0.54
SNX17-209ENST00000494893 WFDC10BQ8IUB3 73 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 HIST1H2BHQ93079 126 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 HIST1H2BNQ99877 126 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 HIST1H2BMQ99879 126 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 PKD1P98161 4303 aa11.68□□□□□ -0.54
SNX17-209ENST00000494893 GAGE12JA6NER3 117 aa11.67□□□□□ -0.54
SNX17-209ENST00000494893 SIVA1O15304 175 aa11.67□□□□□ -0.54
SNX17-209ENST00000494893 GAGE1Q13065 139 aa11.67□□□□□ -0.54
SNX17-209ENST00000494893 GAGE4Q13068 117 aa11.67□□□□□ -0.54
SNX17-209ENST00000494893 GAGE5Q13069 117 aa11.67□□□□□ -0.54
SNX17-209ENST00000494893 GAGE13Q4V321 117 aa11.67□□□□□ -0.54
SNX17-209ENST00000494893 NRACQ8N912 160 aa11.67□□□□□ -0.54
SNX17-209ENST00000494893 LAMTOR2Q9Y2Q5 125 aa11.67□□□□□ -0.54
SNX17-209ENST00000494893 DNAH11Q96DT5 4516 aa11.67□□□□□ -0.54
SNX17-209ENST00000494893 H7C1H1 209 aa11.66□□□□□ -0.54
SNX17-209ENST00000494893 TNFRSF6BO95407 300 aa11.66□□□□□ -0.54
SNX17-209ENST00000494893 PPP1R17O96001 155 aa11.66□□□□□ -0.54
SNX17-209ENST00000494893 NPYP01303 97 aa11.66□□□□□ -0.54
SNX17-209ENST00000494893 C1orf134Q5TEV5 83 aa11.66□□□□□ -0.54
SNX17-209ENST00000494893 SH2D6Q7Z4S9 175 aa11.66□□□□□ -0.54
SNX17-209ENST00000494893 A0A1B0GVY2 172 aa11.65□□□□□ -0.54
SNX17-209ENST00000494893 LINC00336Q6ZUF6 198 aa11.65□□□□□ -0.54
SNX17-209ENST00000494893 ATP6V0E2Q8NHE4 81 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms