RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TYMSP04818 313 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
PTCD3-219ENST00000494323 IFITM3Q01628 133 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 TDRG1Q3Y452 100 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 LELP1Q5T871 98 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 CFAP126Q5VTH2 177 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 Q6ZSA8 131 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 DAZ4Q86SG3 579 aaKnown RBP3.35□□□□□ -1.87
PTCD3-219ENST00000494323 STX12Q86Y82 276 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 C15orf54Q8N8G6 183 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 OR5C1Q8NGR4 320 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 ATP6V0E2Q8NHE4 81 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 TVP23CQ96ET8 276 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 DNAJC30Q96LL9 226 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 PRADC1Q9BSG0 188 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 GTSF1LQ9H1H1 148 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 DAZ3Q9NR90 486 aaKnown RBP3.35□□□□□ -1.87
PTCD3-219ENST00000494323 Q9UF83 564 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 LRP1Q07954 4544 aaKnown RBP3.34□□□□□ -1.87
PTCD3-219ENST00000494323 TRAV8-1A0A0A6YYK1 113 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 F6UZH7 168 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 RS1O15537 224 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 SIX6O95475 246 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 IGLV2-8P01709 118 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 GOLT1AQ6ZVE7 132 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 AKAP14Q86UN6 197 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 OR2T35Q8NGX2 323 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 CIRBP-AS1Q8TBR5 109 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 ASB13Q8WXK3 278 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 CHAC1Q9BUX1 264 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 TREM1Q9NP99 234 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 NUDT15Q9NV35 164 aa3.34□□□□□ -1.87
PTCD3-219ENST00000494323 TRAV8-3A0A0A6YYJ7 113 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 TRAV21A0A0B4J279 112 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 TRBV6-4A0A1B0GX49 114 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 INMT-MINDY4F8WBC2 141 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 OXTP01178 125 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 ZNF80P51504 273 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-219ENST00000494323 GNG5P63218 68 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 UBE2L3P68036 154 aaKnown RBP3.33□□□□□ -1.88
PTCD3-219ENST00000494323 KCNIP4Q6PIL6 250 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 CMTM2Q8TAZ6 248 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 KCNS1Q96KK3 526 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 MARVELD1Q9BSK0 173 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 SAMD10Q9BYL1 202 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 WDR61Q9GZS3 305 aaKnown RBP3.33□□□□□ -1.88
PTCD3-219ENST00000494323 PPDPFQ9H3Y8 114 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 OR5AC2Q9NZP5 309 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 LENEPQ9Y5L5 61 aa3.33□□□□□ -1.88
PTCD3-219ENST00000494323 IGKV2D-24A0A075B6R9 120 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 A0A1B0GVG6 124 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 GGTLC3B5MD39 225 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 C17orf112F2Z3M2 114 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 HMGB3O15347 200 aaKnown RBP3.32□□□□□ -1.88
PTCD3-219ENST00000494323 HNRNPA3P51991 378 aaKnown RBP3.32□□□□□ -1.88
PTCD3-219ENST00000494323 CXCL6P80162 114 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 RHOHQ15669 191 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 Q8N976 141 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 TMEM75Q8N9X5 138 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 GTSF1Q8WW33 167 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 ATP5SQ99766 215 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 SMIM3Q9BZL3 60 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 OTORQ9NRC9 128 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 KLK12Q9UKR0 248 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 DNAH8Q96JB1 4490 aa3.32□□□□□ -1.88
PTCD3-219ENST00000494323 TAAR5O14804 337 aa3.31□□□□□ -1.88
PTCD3-219ENST00000494323 GCGP01275 180 aa3.31□□□□□ -1.88
PTCD3-219ENST00000494323 MGST1P10620 155 aaKnown RBP3.31□□□□□ -1.88
PTCD3-219ENST00000494323 RNASE3P12724 160 aaKnown RBP3.31□□□□□ -1.88
PTCD3-219ENST00000494323 DSCR10P59022 87 aa3.31□□□□□ -1.88
PTCD3-219ENST00000494323 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
PTCD3-219ENST00000494323 LGALSLQ3ZCW2 172 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-219ENST00000494323 KHDC3LQ587J8 217 aa3.31□□□□□ -1.88
PTCD3-219ENST00000494323 FAM74A1Q5RGS3 127 aa3.31□□□□□ -1.88
PTCD3-219ENST00000494323 C14orf178Q8N769 122 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-219ENST00000494323 CYB561D1Q8N8Q1 229 aa3.31□□□□□ -1.88
PTCD3-219ENST00000494323 SCGB1C1Q8TD33 95 aa3.31□□□□□ -1.88
PTCD3-219ENST00000494323 UBE2WQ96B02 151 aa3.31□□□□□ -1.88
PTCD3-219ENST00000494323 MED28Q9H204 178 aa3.31□□□□□ -1.88
PTCD3-219ENST00000494323 URGCP-MRPS24S4R325 110 aa3.31□□□□□ -1.88
PTCD3-219ENST00000494323 A0A1W2PPV4 95 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 BCL2L11O43521 198 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 SSNA1O43805 119 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 TAS2R45P59539 299 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 RPL37AP61513 92 aaKnown RBP3.3□□□□□ -1.88
PTCD3-219ENST00000494323 ACOT6Q3I5F7 207 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-219ENST00000494323 PRNTQ86SH4 94 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 NIT1Q86X76 327 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 TCTE3Q8IZS6 198 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 RMI2Q96E14 147 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 WFDC1Q9HC57 220 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 KCNIP2Q9NS61 270 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 PSG8Q9UQ74 426 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 ALG5Q9Y673 324 aa3.3□□□□□ -1.88
PTCD3-219ENST00000494323 HMCN2Q8NDA2 5059 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 A0A087WWC5 75 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 XKRY2A2RUG3 117 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 E9PLD3 99 aa3.29□□□□□ -1.88
PTCD3-219ENST00000494323 TMEM262E9PQX1 116 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms