RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 RNASE8Q8TDE3 154 aaKnown RBP7.72□□□□□ -1.17
CLCN6-208ENST00000494028 SPXQ9BT56 116 aa7.72□□□□□ -1.17
CLCN6-208ENST00000494028 NIPBLQ6KC79 2804 aaeCLIP7.71□□□□□ -1.17
CLCN6-208ENST00000494028 TRAV12-1A0A0B4J245 112 aa7.71□□□□□ -1.18
CLCN6-208ENST00000494028 RHODO00212 210 aa7.71□□□□□ -1.18
CLCN6-208ENST00000494028 RS1O15537 224 aa7.71□□□□□ -1.18
CLCN6-208ENST00000494028 COX8AP10176 69 aa7.71□□□□□ -1.18
CLCN6-208ENST00000494028 AZU1P20160 251 aa7.71□□□□□ -1.18
CLCN6-208ENST00000494028 RHOHQ15669 191 aa7.71□□□□□ -1.18
CLCN6-208ENST00000494028 SLC25A34Q6PIV7 304 aa7.71□□□□□ -1.18
CLCN6-208ENST00000494028 ZFP2Q6ZN57 461 aa7.71□□□□□ -1.18
CLCN6-208ENST00000494028 CYSLTR1Q9Y271 337 aa7.71□□□□□ -1.18
CLCN6-208ENST00000494028 TP53TG1Q9Y2A0 90 aa7.71□□□□□ -1.18
CLCN6-208ENST00000494028 MRPS16Q9Y3D3 137 aaKnown RBP7.71□□□□□ -1.18
CLCN6-208ENST00000494028 SETD2Q9BYW2 2564 aaPredicted RBP7.7□□□□□ -1.18
CLCN6-208ENST00000494028 A0A087WX48 190 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 VCYO14598 125 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 DPM2O94777 84 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 TSHBP01222 138 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 PRSS1P07477 247 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 NUTF2P61970 127 aaKnown RBP7.7□□□□□ -1.18
CLCN6-208ENST00000494028 CFAP126Q5VTH2 177 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 C2orf91Q6ZV80 131 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 LURAP1LQ8IV03 231 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 TMEM263Q8WUH6 116 aaKnown RBP7.7□□□□□ -1.18
CLCN6-208ENST00000494028 BAALCQ8WXS3 180 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 SCGB3A1Q96QR1 104 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 CITED1Q99966 193 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 TMEM208Q9BTX3 173 aa7.7□□□□□ -1.18
CLCN6-208ENST00000494028 MRPL35Q9NZE8 188 aaKnown RBP7.7□□□□□ -1.18
CLCN6-208ENST00000494028 IGHV3OR16-12A0A075B7B8 117 aa7.69□□□□□ -1.18
CLCN6-208ENST00000494028 IGHV3-73A0A0B4J1V6 119 aa7.69□□□□□ -1.18
CLCN6-208ENST00000494028 A0A1B0GV90 55 aa7.69□□□□□ -1.18
CLCN6-208ENST00000494028 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.69□□□□□ -1.18
CLCN6-208ENST00000494028 H7C1H1 209 aa7.69□□□□□ -1.18
CLCN6-208ENST00000494028 IGKCP01834 107 aa7.69□□□□□ -1.18
CLCN6-208ENST00000494028 P0DMU3 169 aa7.69□□□□□ -1.18
CLCN6-208ENST00000494028 FAM231AP0DMU4 169 aa7.69□□□□□ -1.18
CLCN6-208ENST00000494028 FAM231CP0DMU5 169 aa7.69□□□□□ -1.18
CLCN6-208ENST00000494028 RPL35AP18077 110 aaKnown RBP7.69□□□□□ -1.18
CLCN6-208ENST00000494028 STPG4Q8N801 248 aa7.69□□□□□ -1.18
CLCN6-208ENST00000494028 NEXN-AS1Q8NBZ9 246 aa7.69□□□□□ -1.18
CLCN6-208ENST00000494028 KIR2DL4Q99706 377 aa7.69□□□□□ -1.18
CLCN6-208ENST00000494028 PLAC8L1A1L4L8 177 aa7.68□□□□□ -1.18
CLCN6-208ENST00000494028 LINC01549A6NIU2 74 aa7.68□□□□□ -1.18
CLCN6-208ENST00000494028 F8VRH5 84 aa7.68□□□□□ -1.18
CLCN6-208ENST00000494028 TCTAP57738 103 aa7.68□□□□□ -1.18
CLCN6-208ENST00000494028 ERASQ7Z444 233 aa7.68□□□□□ -1.18
CLCN6-208ENST00000494028 JMJD1CQ15652 2540 aa7.68□□□□□ -1.18
CLCN6-208ENST00000494028 IGIPA6NJ69 53 aa7.67□□□□□ -1.18
CLCN6-208ENST00000494028 IGHV3-53P01767 116 aa7.67□□□□□ -1.18
CLCN6-208ENST00000494028 PLNP26678 52 aa7.67□□□□□ -1.18
CLCN6-208ENST00000494028 RPL39P62891 51 aaKnown RBP7.67□□□□□ -1.18
CLCN6-208ENST00000494028 BATFQ16520 125 aa7.67□□□□□ -1.18
CLCN6-208ENST00000494028 C9orf66Q5T8R8 295 aa7.67□□□□□ -1.18
CLCN6-208ENST00000494028 Q6ZSN1 163 aa7.67□□□□□ -1.18
CLCN6-208ENST00000494028 CSNK1G2-AS1Q8NCQ2 148 aa7.67□□□□□ -1.18
CLCN6-208ENST00000494028 DEFB104AQ8WTQ1 72 aa7.67□□□□□ -1.18
CLCN6-208ENST00000494028 TIMM17AQ99595 171 aa7.67□□□□□ -1.18
CLCN6-208ENST00000494028 HHLA3Q9XRX5 114 aa7.67□□□□□ -1.18
CLCN6-208ENST00000494028 IGKV2D-26A0A0A0MRZ7 120 aa7.66□□□□□ -1.18
CLCN6-208ENST00000494028 TRGV1A0A0A0MS02 117 aa7.66□□□□□ -1.18
CLCN6-208ENST00000494028 I3L3M4 83 aa7.66□□□□□ -1.18
CLCN6-208ENST00000494028 G0S2P27469 103 aa7.66□□□□□ -1.18
CLCN6-208ENST00000494028 INSL3P51460 131 aa7.66□□□□□ -1.18
CLCN6-208ENST00000494028 PRIMA1Q86XR5 153 aa7.66□□□□□ -1.18
CLCN6-208ENST00000494028 BOD1L2Q8IYS8 172 aa7.66□□□□□ -1.18
CLCN6-208ENST00000494028 C16orf74Q96GX8 76 aa7.66□□□□□ -1.18
CLCN6-208ENST00000494028 C1QTNF4Q9BXJ3 329 aa7.66□□□□□ -1.18
CLCN6-208ENST00000494028 CHTOPQ9Y3Y2 248 aaKnown RBP7.66□□□□□ -1.18
CLCN6-208ENST00000494028 IGLV4-69A0A075B6H9 119 aa7.65□□□□□ -1.18
CLCN6-208ENST00000494028 DLEU1O43261 78 aa7.65□□□□□ -1.18
CLCN6-208ENST00000494028 NMUP48645 174 aa7.65□□□□□ -1.18
CLCN6-208ENST00000494028 HINT1P49773 126 aaPredicted RBP7.65□□□□□ -1.18
CLCN6-208ENST00000494028 ZC2HC1BQ5TFG8 222 aa7.65□□□□□ -1.18
CLCN6-208ENST00000494028 Q6ZTI0 123 aa7.65□□□□□ -1.18
CLCN6-208ENST00000494028 PCP2Q8IVA1 136 aa7.65□□□□□ -1.18
CLCN6-208ENST00000494028 TMEM141Q96I45 108 aa7.65□□□□□ -1.18
CLCN6-208ENST00000494028 TRAV4A0A0B4J268 109 aa7.64□□□□□ -1.19
CLCN6-208ENST00000494028 PRSS29PA6NIE9 313 aa7.64□□□□□ -1.19
CLCN6-208ENST00000494028 DAZ2Q13117 558 aaKnown RBP7.64□□□□□ -1.19
CLCN6-208ENST00000494028 GTSCR1Q86UQ5 136 aa7.64□□□□□ -1.19
CLCN6-208ENST00000494028 C20orf203Q8NBC4 194 aa7.64□□□□□ -1.19
CLCN6-208ENST00000494028 DNAJC30Q96LL9 226 aa7.64□□□□□ -1.19
CLCN6-208ENST00000494028 Q9UF83 564 aa7.64□□□□□ -1.19
CLCN6-208ENST00000494028 COL5A1-AS1Q5SY13 56 aa7.63□□□□□ -1.19
CLCN6-208ENST00000494028 ZNF479Q96JC4 524 aa7.63□□□□□ -1.19
CLCN6-208ENST00000494028 TNFRSF18Q9Y5U5 241 aa7.63□□□□□ -1.19
CLCN6-208ENST00000494028 ATRQ13535 2644 aa7.62□□□□□ -1.19
CLCN6-208ENST00000494028 IGLV4-3A0A075B6K6 122 aa7.62□□□□□ -1.19
CLCN6-208ENST00000494028 C11orf86A6NJI1 115 aa7.62□□□□□ -1.19
CLCN6-208ENST00000494028 K7EQD1 137 aa7.62□□□□□ -1.19
CLCN6-208ENST00000494028 PMVKQ15126 192 aa7.62□□□□□ -1.19
CLCN6-208ENST00000494028 RRN3P1Q2M238 152 aa7.62□□□□□ -1.19
CLCN6-208ENST00000494028 MPV17L2Q567V2 206 aa7.62□□□□□ -1.19
CLCN6-208ENST00000494028 BVES-AS1Q5T3Y7 98 aa7.62□□□□□ -1.19
CLCN6-208ENST00000494028 OR4C5Q8NGB2 326 aa7.62□□□□□ -1.19
CLCN6-208ENST00000494028 CHCHD7Q9BUK0 85 aa7.62□□□□□ -1.19
CLCN6-208ENST00000494028 TTTY13Q9BZ97 58 aa7.62□□□□□ -1.19
CLCN6-208ENST00000494028 NOP10Q9NPE3 64 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms