RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 SMKR1H3BMG3 65 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 HBDP02042 147 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 PPBPP02775 128 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 EVI2AP22794 236 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 DEFB135Q30KP9 77 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 LGALS9BQ3B8N2 356 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 LGALS9CQ6DKI2 356 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 C16orf74Q96GX8 76 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 PMCHL2Q9BQD1 86 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 TP73-AS1Q9UF72 201 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 COX11Q9Y6N1 276 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 MEGF8Q7Z7M0 2845 aa10.17□□□□□ -0.78
PDZRN3-210ENST00000492909 LINC01546A6NGU7 62 aa10.16□□□□□ -0.78
PDZRN3-210ENST00000492909 M0R2P5 195 aa10.16□□□□□ -0.78
PDZRN3-210ENST00000492909 ZNF876PQ49A33 203 aa10.16□□□□□ -0.78
PDZRN3-210ENST00000492909 AP1S3Q96PC3 154 aa10.16□□□□□ -0.78
PDZRN3-210ENST00000492909 COX8AP10176 69 aa10.16□□□□□ -0.78
PDZRN3-210ENST00000492909 MAP1LC3AQ9H492 121 aa10.16□□□□□ -0.78
PDZRN3-210ENST00000492909 SMIM9A6NGZ8 99 aa10.15□□□□□ -0.78
PDZRN3-210ENST00000492909 MPV17L2Q567V2 206 aa10.15□□□□□ -0.78
PDZRN3-210ENST00000492909 IL17DQ8TAD2 202 aa10.15□□□□□ -0.78
PDZRN3-210ENST00000492909 PTH2Q96A98 100 aa10.15□□□□□ -0.78
PDZRN3-210ENST00000492909 PIK3CD-AS1Q5SR53 167 aa10.14□□□□□ -0.79
PDZRN3-210ENST00000492909 BVES-AS1Q5T3Y7 98 aa10.14□□□□□ -0.79
PDZRN3-210ENST00000492909 C14orf178Q8N769 122 aaPredicted RBP10.14□□□□□ -0.79
PDZRN3-210ENST00000492909 DPH3P1Q9H4G8 78 aa10.14□□□□□ -0.79
PDZRN3-210ENST00000492909 X6R8D5 127 aa10.14□□□□□ -0.79
PDZRN3-210ENST00000492909 NUDT3O95989 172 aa10.14□□□□□ -0.79
PDZRN3-210ENST00000492909 SMIM17P0DL12 118 aa10.14□□□□□ -0.79
PDZRN3-210ENST00000492909 IFI27L1Q96BM0 104 aa10.14□□□□□ -0.79
PDZRN3-210ENST00000492909 PLAC8L1A1L4L8 177 aa10.13□□□□□ -0.79
PDZRN3-210ENST00000492909 DAZ2Q13117 558 aaKnown RBP10.13□□□□□ -0.79
PDZRN3-210ENST00000492909 RNF183Q96D59 192 aa10.13□□□□□ -0.79
PDZRN3-210ENST00000492909 JPT2Q9H910 190 aa10.13□□□□□ -0.79
PDZRN3-210ENST00000492909 NXT2Q9NPJ8 142 aaKnown RBP10.13□□□□□ -0.79
PDZRN3-210ENST00000492909 TNFRSF6BO95407 300 aa10.12□□□□□ -0.79
PDZRN3-210ENST00000492909 Q6ZVH6 145 aa10.12□□□□□ -0.79
PDZRN3-210ENST00000492909 OR11H2Q8NH07 326 aa10.12□□□□□ -0.79
PDZRN3-210ENST00000492909 RASL10AQ92737 203 aa10.12□□□□□ -0.79
PDZRN3-210ENST00000492909 NOP10Q9NPE3 64 aaKnown RBP10.12□□□□□ -0.79
PDZRN3-210ENST00000492909 MRPL16Q9NX20 251 aaKnown RBP10.12□□□□□ -0.79
PDZRN3-210ENST00000492909 NBEAL2Q6ZNJ1 2754 aa10.12□□□□□ -0.79
PDZRN3-210ENST00000492909 K7EIL1 84 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 UBE2V1Q13404 147 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 ANKRD39Q53RE8 183 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 C2orf91Q6ZV80 131 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 KIF25-AS1Q9Y6Z4 181 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 A0A087WWL8 130 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 TRGV1A0A0A0MS02 117 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 A6NJY4 79 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 A8MWV9 139 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 FGF6P10767 208 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 FCER1GP30273 86 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 FAM74A4Q5TZK3 123 aa10.11□□□□□ -0.79
PDZRN3-210ENST00000492909 TAX1BP3O14907 124 aa10.1□□□□□ -0.79
PDZRN3-210ENST00000492909 MGPP08493 103 aa10.1□□□□□ -0.79
PDZRN3-210ENST00000492909 PTTG1IPP53801 180 aa10.1□□□□□ -0.79
PDZRN3-210ENST00000492909 OVOL2Q9BRP0 275 aa10.1□□□□□ -0.79
PDZRN3-210ENST00000492909 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
PDZRN3-210ENST00000492909 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 CCL25O15444 150 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 CRYGDP07320 174 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 MIFP14174 115 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 EMP1P54849 157 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 Q6ZTI0 123 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 Q8N8P6 123 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 MRAP2Q96G30 205 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 TP53TG1Q9Y2A0 90 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 IGLV2-18A0A075B6J9 118 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 LINC00315P59091 139 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 BOD1L2Q8IYS8 172 aa10.09□□□□□ -0.79
PDZRN3-210ENST00000492909 GATA1P15976 413 aaPredicted RBP10.08□□□□□ -0.8
PDZRN3-210ENST00000492909 DEFB121Q5J5C9 76 aa10.08□□□□□ -0.8
PDZRN3-210ENST00000492909 CFAP126Q5VTH2 177 aa10.08□□□□□ -0.8
PDZRN3-210ENST00000492909 POM121L12Q8N7R1 296 aa10.08□□□□□ -0.8
PDZRN3-210ENST00000492909 MRAPQ8TCY5 172 aa10.08□□□□□ -0.8
PDZRN3-210ENST00000492909 TRAV26-2A0A0B4J265 109 aa10.07□□□□□ -0.8
PDZRN3-210ENST00000492909 IGHV4-28A0A0C4DH34 117 aa10.07□□□□□ -0.8
PDZRN3-210ENST00000492909 F5H697 171 aa10.07□□□□□ -0.8
PDZRN3-210ENST00000492909 ZNF56Q15929 161 aa10.07□□□□□ -0.8
PDZRN3-210ENST00000492909 NRACQ8N912 160 aa10.07□□□□□ -0.8
PDZRN3-210ENST00000492909 RHODO00212 210 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 SIVA1O15304 175 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 RS1O15537 224 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 TMEM97Q5BJF2 176 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 Q8NAQ8 132 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 ZMAT4Q9H898 229 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 GAGE12BA1L429 117 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 GAGE7O76087 117 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 GAGE12FP0CL80 117 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 GAGE12GP0CL81 117 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 GAGE12IP0CL82 117 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 UFSP1Q6NVU6 142 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 OR4C5Q8NGB2 326 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 C18orf15Q96N68 181 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 DKK2Q9UBU2 259 aa10.06□□□□□ -0.8
PDZRN3-210ENST00000492909 TRGV2A0A075B6R0 118 aa10.05□□□□□ -0.8
PDZRN3-210ENST00000492909 SEC11AP67812 179 aa10.05□□□□□ -0.8
PDZRN3-210ENST00000492909 ODF1Q14990 250 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms