RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 UFSP1Q6NVU6 142 aa7.86□□□□□ -1.15
USP4-214ENST00000491791 TRPT1Q86TN4 253 aaKnown RBP7.86□□□□□ -1.15
USP4-214ENST00000491791 C18orf15Q96N68 181 aa7.86□□□□□ -1.15
USP4-214ENST00000491791 IGIPA6NJ69 53 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 ADARB2-AS1A8MUL3 147 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 A8MWV9 139 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 F8VRH5 84 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 IGKV3-20P01619 116 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 ODF3L2Q3SX64 289 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 ZNF876PQ49A33 203 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 KHDC1LQ5JSQ8 128 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 BVES-AS1Q5T3Y7 98 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 SHISA2Q6UWI4 295 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 C2orf66Q6UXQ4 117 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 ORAOV1Q8WV07 137 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 TMEM141Q96I45 108 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 SCGB3A1Q96QR1 104 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 TIMM17AQ99595 171 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 CITED2Q99967 270 aaPredicted RBP7.85□□□□□ -1.15
USP4-214ENST00000491791 JPT2Q9H910 190 aa7.85□□□□□ -1.15
USP4-214ENST00000491791 SDHAF1A6NFY7 115 aa7.84□□□□□ -1.15
USP4-214ENST00000491791 M0R2P5 195 aa7.84□□□□□ -1.15
USP4-214ENST00000491791 ZNF415Q09FC8 603 aa7.84□□□□□ -1.15
USP4-214ENST00000491791 NSUN5P1Q3KNT7 163 aa7.84□□□□□ -1.15
USP4-214ENST00000491791 MORN3Q6PF18 240 aaPredicted RBP7.84□□□□□ -1.15
USP4-214ENST00000491791 ZFP2Q6ZN57 461 aa7.84□□□□□ -1.15
USP4-214ENST00000491791 C11orf72Q8NBR9 251 aa7.84□□□□□ -1.15
USP4-214ENST00000491791 DUX3Q96PT4 197 aa7.84□□□□□ -1.15
USP4-214ENST00000491791 KIR2DL4Q99706 377 aa7.84□□□□□ -1.15
USP4-214ENST00000491791 MRPL35Q9NZE8 188 aaKnown RBP7.84□□□□□ -1.15
USP4-214ENST00000491791 CYSLTR1Q9Y271 337 aa7.84□□□□□ -1.15
USP4-214ENST00000491791 PKD1L1Q8TDX9 2849 aa7.84□□□□□ -1.16
USP4-214ENST00000491791 A0A087WWL8 130 aa7.83□□□□□ -1.16
USP4-214ENST00000491791 CBY3A6NI87 242 aa7.83□□□□□ -1.16
USP4-214ENST00000491791 INSP01308 110 aa7.83□□□□□ -1.16
USP4-214ENST00000491791 IGLV1-51P01701 117 aa7.83□□□□□ -1.16
USP4-214ENST00000491791 NPSP0C0P6 89 aa7.83□□□□□ -1.16
USP4-214ENST00000491791 HINT1P49773 126 aaPredicted RBP7.83□□□□□ -1.16
USP4-214ENST00000491791 SEC11AP67812 179 aa7.83□□□□□ -1.16
USP4-214ENST00000491791 MPV17L2Q567V2 206 aa7.83□□□□□ -1.16
USP4-214ENST00000491791 PAPPA-AS1Q5QFB9 102 aa7.83□□□□□ -1.16
USP4-214ENST00000491791 OR11H12B2RN74 326 aa7.82□□□□□ -1.16
USP4-214ENST00000491791 F5H697 171 aa7.82□□□□□ -1.16
USP4-214ENST00000491791 RHODO00212 210 aa7.82□□□□□ -1.16
USP4-214ENST00000491791 TMEM97Q5BJF2 176 aa7.82□□□□□ -1.16
USP4-214ENST00000491791 IL17DQ8TAD2 202 aa7.82□□□□□ -1.16
USP4-214ENST00000491791 BAALCQ8WXS3 180 aa7.82□□□□□ -1.16
USP4-214ENST00000491791 TMEM208Q9BTX3 173 aa7.82□□□□□ -1.16
USP4-214ENST00000491791 I3L3M4 83 aa7.81□□□□□ -1.16
USP4-214ENST00000491791 RS1O15537 224 aa7.81□□□□□ -1.16
USP4-214ENST00000491791 TSHBP01222 138 aa7.81□□□□□ -1.16
USP4-214ENST00000491791 CRYBA4P53673 196 aa7.81□□□□□ -1.16
USP4-214ENST00000491791 HSD52Q0P140 79 aa7.81□□□□□ -1.16
USP4-214ENST00000491791 BATFQ16520 125 aa7.81□□□□□ -1.16
USP4-214ENST00000491791 ZC2HC1BQ5TFG8 222 aa7.81□□□□□ -1.16
USP4-214ENST00000491791 NDUFA11Q86Y39 141 aa7.81□□□□□ -1.16
USP4-214ENST00000491791 DNAJC30Q96LL9 226 aa7.81□□□□□ -1.16
USP4-214ENST00000491791 CHTOPQ9Y3Y2 248 aaKnown RBP7.81□□□□□ -1.16
USP4-214ENST00000491791 COX11Q9Y6N1 276 aa7.81□□□□□ -1.16
USP4-214ENST00000491791 PRSS29PA6NIE9 313 aa7.8□□□□□ -1.16
USP4-214ENST00000491791 ZNF124Q15973 351 aa7.8□□□□□ -1.16
USP4-214ENST00000491791 PCP2Q8IVA1 136 aa7.8□□□□□ -1.16
USP4-214ENST00000491791 C1orf158Q8N1D5 194 aa7.8□□□□□ -1.16
USP4-214ENST00000491791 C19orf73Q9NVV2 129 aa7.8□□□□□ -1.16
USP4-214ENST00000491791 PYGO1Q9Y3Y4 419 aa7.8□□□□□ -1.16
USP4-214ENST00000491791 AGRNO00468 2067 aa7.8□□□□□ -1.16
USP4-214ENST00000491791 TGP01266 2768 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 IGKV2D-26A0A0A0MRZ7 120 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 E9PLD3 99 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 TAX1BP3O14907 124 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 IGHV3-53P01767 116 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 ZNF25P17030 456 aaPredicted RBP7.79□□□□□ -1.16
USP4-214ENST00000491791 PMVKQ15126 192 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 ZNF56Q15929 161 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 TAL2Q16559 108 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 CFAP126Q5VTH2 177 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 STHQ8IWL8 128 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 C20orf203Q8NBC4 194 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 LINC01587Q99440 93 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 CST9LQ9H4G1 147 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 TP53TG1Q9Y2A0 90 aa7.79□□□□□ -1.16
USP4-214ENST00000491791 CIDEAO60543 219 aa7.78□□□□□ -1.16
USP4-214ENST00000491791 P0DMU3 169 aa7.78□□□□□ -1.16
USP4-214ENST00000491791 FAM231AP0DMU4 169 aa7.78□□□□□ -1.16
USP4-214ENST00000491791 FAM231CP0DMU5 169 aa7.78□□□□□ -1.16
USP4-214ENST00000491791 FAM74A4Q5TZK3 123 aa7.78□□□□□ -1.16
USP4-214ENST00000491791 TP73-AS1Q9UF72 201 aa7.78□□□□□ -1.16
USP4-214ENST00000491791 IGLV4-69A0A075B6H9 119 aa7.77□□□□□ -1.17
USP4-214ENST00000491791 A0A1W2PRX2 142 aa7.77□□□□□ -1.17
USP4-214ENST00000491791 NMUP48645 174 aa7.77□□□□□ -1.17
USP4-214ENST00000491791 GTSCR1Q86UQ5 136 aa7.77□□□□□ -1.17
USP4-214ENST00000491791 NFE4Q86UQ8 179 aa7.77□□□□□ -1.17
USP4-214ENST00000491791 RNASE8Q8TDE3 154 aaKnown RBP7.77□□□□□ -1.17
USP4-214ENST00000491791 TM2D2Q9BX73 214 aa7.77□□□□□ -1.17
USP4-214ENST00000491791 TRBV25-1A0A075B6N4 114 aa7.76□□□□□ -1.17
USP4-214ENST00000491791 A6NDN8 102 aa7.76□□□□□ -1.17
USP4-214ENST00000491791 GIG44P09565 113 aaPredicted RBP7.76□□□□□ -1.17
USP4-214ENST00000491791 DAZ2Q13117 558 aaKnown RBP7.76□□□□□ -1.17
USP4-214ENST00000491791 NEGR1Q7Z3B1 354 aa7.76□□□□□ -1.17
USP4-214ENST00000491791 C11orf44Q8N8P7 122 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms