RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 HLA-DQA1P01909 254 aa9.54□□□□□ -0.88
CDK9-204ENST00000491521 MT-ND6P03923 174 aa9.54□□□□□ -0.88
CDK9-204ENST00000491521 RAB5AP20339 215 aa9.54□□□□□ -0.88
CDK9-204ENST00000491521 FABP9Q0Z7S8 132 aa9.54□□□□□ -0.88
CDK9-204ENST00000491521 FHL2Q14192 279 aa9.54□□□□□ -0.88
CDK9-204ENST00000491521 GATD1Q8NB37 220 aa9.54□□□□□ -0.88
CDK9-204ENST00000491521 MRPL18Q9H0U6 180 aaKnown RBP9.54□□□□□ -0.88
CDK9-204ENST00000491521 HHLA3Q9XRX5 114 aa9.54□□□□□ -0.88
CDK9-204ENST00000491521 KIAA1109Q2LD37 5005 aa9.54□□□□□ -0.88
CDK9-204ENST00000491521 PKHD1P08F94 4074 aa9.53□□□□□ -0.88
CDK9-204ENST00000491521 NUDT3O95989 172 aa9.53□□□□□ -0.88
CDK9-204ENST00000491521 CKS2P33552 79 aa9.53□□□□□ -0.88
CDK9-204ENST00000491521 LINC00315P59091 139 aa9.53□□□□□ -0.88
CDK9-204ENST00000491521 MRPL51Q4U2R6 128 aaKnown RBP9.53□□□□□ -0.88
CDK9-204ENST00000491521 UFSP1Q6NVU6 142 aa9.53□□□□□ -0.88
CDK9-204ENST00000491521 Q6ZSN1 163 aa9.53□□□□□ -0.88
CDK9-204ENST00000491521 RNF185Q96GF1 192 aa9.53□□□□□ -0.88
CDK9-204ENST00000491521 NACAE9PAV3 2078 aa9.52□□□□□ -0.88
CDK9-204ENST00000491521 TRAV26-2A0A0B4J265 109 aa9.52□□□□□ -0.89
CDK9-204ENST00000491521 HOXA5P20719 270 aa9.52□□□□□ -0.89
CDK9-204ENST00000491521 SLAQ13239 276 aa9.52□□□□□ -0.89
CDK9-204ENST00000491521 KIAA1644Q3SXP7 199 aa9.52□□□□□ -0.89
CDK9-204ENST00000491521 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.89
CDK9-204ENST00000491521 SMKR1H3BMG3 65 aa9.51□□□□□ -0.89
CDK9-204ENST00000491521 H7C1H1 209 aa9.51□□□□□ -0.89
CDK9-204ENST00000491521 GATA1P15976 413 aaPredicted RBP9.51□□□□□ -0.89
CDK9-204ENST00000491521 SLC25A29Q8N8R3 303 aa9.51□□□□□ -0.89
CDK9-204ENST00000491521 C15orf53Q8NAA6 179 aa9.51□□□□□ -0.89
CDK9-204ENST00000491521 MRAP2Q96G30 205 aa9.51□□□□□ -0.89
CDK9-204ENST00000491521 PRO0255Q9UI72 69 aa9.51□□□□□ -0.89
CDK9-204ENST00000491521 A0A0J9YY99 117 aa9.5□□□□□ -0.89
CDK9-204ENST00000491521 PRSS29PA6NIE9 313 aa9.5□□□□□ -0.89
CDK9-204ENST00000491521 RTL8CO15255 209 aa9.5□□□□□ -0.89
CDK9-204ENST00000491521 PAX4O43316 350 aa9.5□□□□□ -0.89
CDK9-204ENST00000491521 NCR2O95944 276 aa9.5□□□□□ -0.89
CDK9-204ENST00000491521 LINC00336Q6ZUF6 198 aa9.5□□□□□ -0.89
CDK9-204ENST00000491521 PRADC1Q9BSG0 188 aa9.5□□□□□ -0.89
CDK9-204ENST00000491521 PKD1P98161 4303 aa9.49□□□□□ -0.89
CDK9-204ENST00000491521 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
CDK9-204ENST00000491521 TRBV6-4A0A1B0GX49 114 aa9.49□□□□□ -0.89
CDK9-204ENST00000491521 D6R8Y8 96 aa9.49□□□□□ -0.89
CDK9-204ENST00000491521 K7EQD1 137 aa9.49□□□□□ -0.89
CDK9-204ENST00000491521 M0QY20 66 aa9.49□□□□□ -0.89
CDK9-204ENST00000491521 PPBPP02775 128 aa9.49□□□□□ -0.89
CDK9-204ENST00000491521 TRGC2P03986 189 aa9.49□□□□□ -0.89
CDK9-204ENST00000491521 CRYBA4P53673 196 aa9.49□□□□□ -0.89
CDK9-204ENST00000491521 ORMDL3Q8N138 153 aa9.49□□□□□ -0.89
CDK9-204ENST00000491521 GAS8-AS1O95177 125 aa9.48□□□□□ -0.89
CDK9-204ENST00000491521 RHOHQ15669 191 aa9.48□□□□□ -0.89
CDK9-204ENST00000491521 OR10J3Q5JRS4 329 aa9.48□□□□□ -0.89
CDK9-204ENST00000491521 RPL39LQ96EH5 51 aaKnown RBP9.48□□□□□ -0.89
CDK9-204ENST00000491521 PRELID3AQ96N28 172 aa9.48□□□□□ -0.89
CDK9-204ENST00000491521 NIT2Q9NQR4 276 aa9.48□□□□□ -0.89
CDK9-204ENST00000491521 TNFRSF18Q9Y5U5 241 aa9.48□□□□□ -0.89
CDK9-204ENST00000491521 DYNC1H1Q14204 4646 aaKnown RBP9.48□□□□□ -0.89
CDK9-204ENST00000491521 GAGE12JA6NER3 117 aa9.47□□□□□ -0.89
CDK9-204ENST00000491521 PPP1R17O96001 155 aa9.47□□□□□ -0.89
CDK9-204ENST00000491521 GYPEP15421 78 aa9.47□□□□□ -0.89
CDK9-204ENST00000491521 GAGE1Q13065 139 aa9.47□□□□□ -0.89
CDK9-204ENST00000491521 GAGE4Q13068 117 aa9.47□□□□□ -0.89
CDK9-204ENST00000491521 GAGE5Q13069 117 aa9.47□□□□□ -0.89
CDK9-204ENST00000491521 GAGE13Q4V321 117 aa9.47□□□□□ -0.89
CDK9-204ENST00000491521 ZNRF2Q8NHG8 242 aa9.47□□□□□ -0.89
CDK9-204ENST00000491521 LOC100131303A0A0U1RQF7 123 aa9.46□□□□□ -0.9
CDK9-204ENST00000491521 TNFRSF6BO95407 300 aa9.46□□□□□ -0.9
CDK9-204ENST00000491521 RPL36AP83881 106 aaKnown RBP9.46□□□□□ -0.9
CDK9-204ENST00000491521 Q6ZR54 194 aa9.46□□□□□ -0.9
CDK9-204ENST00000491521 RPL36ALQ969Q0 106 aaKnown RBP9.46□□□□□ -0.9
CDK9-204ENST00000491521 DNAJC30Q96LL9 226 aa9.46□□□□□ -0.9
CDK9-204ENST00000491521 ST20Q9HBF5 79 aa9.46□□□□□ -0.9
CDK9-204ENST00000491521 Q9UF83 564 aa9.46□□□□□ -0.9
CDK9-204ENST00000491521 TRBV10-1A0A0K0K1A3 114 aa9.45□□□□□ -0.9
CDK9-204ENST00000491521 A0A1B0GVY2 172 aa9.45□□□□□ -0.9
CDK9-204ENST00000491521 SRIP30626 198 aa9.45□□□□□ -0.9
CDK9-204ENST00000491521 NEXN-AS1Q8NBZ9 246 aa9.45□□□□□ -0.9
CDK9-204ENST00000491521 VSIG2Q96IQ7 327 aa9.45□□□□□ -0.9
CDK9-204ENST00000491521 ALKBH7Q9BT30 221 aaPredicted RBP9.45□□□□□ -0.9
CDK9-204ENST00000491521 DNAH11Q96DT5 4516 aa9.45□□□□□ -0.9
CDK9-204ENST00000491521 TRBV7-3A0A075B6L6 115 aa9.44□□□□□ -0.9
CDK9-204ENST00000491521 LOC389332A0A1B0GUA5 103 aa9.44□□□□□ -0.9
CDK9-204ENST00000491521 NPYP01303 97 aa9.44□□□□□ -0.9
CDK9-204ENST00000491521 CCL18P55774 89 aa9.44□□□□□ -0.9
CDK9-204ENST00000491521 C1orf134Q5TEV5 83 aa9.44□□□□□ -0.9
CDK9-204ENST00000491521 NRACQ8N912 160 aa9.44□□□□□ -0.9
CDK9-204ENST00000491521 MAP1LC3AQ9H492 121 aa9.44□□□□□ -0.9
CDK9-204ENST00000491521 LAMTOR2Q9Y2Q5 125 aa9.44□□□□□ -0.9
CDK9-204ENST00000491521 LINC00588Q9Y4M8 146 aa9.44□□□□□ -0.9
CDK9-204ENST00000491521 ICOSQ9Y6W8 199 aa9.44□□□□□ -0.9
CDK9-204ENST00000491521 PCLOQ9Y6V0 5065 aa9.44□□□□□ -0.9
CDK9-204ENST00000491521 C1orf196B1AJZ1 125 aa9.43□□□□□ -0.9
CDK9-204ENST00000491521 PMCHP20382 165 aa9.43□□□□□ -0.9
CDK9-204ENST00000491521 MRPL23Q16540 153 aaKnown RBP9.43□□□□□ -0.9
CDK9-204ENST00000491521 A0A096LPF7 62 aa9.42□□□□□ -0.9
CDK9-204ENST00000491521 TRBV6-5A0A0K0K1A5 114 aa9.42□□□□□ -0.9
CDK9-204ENST00000491521 H3BNG1 76 aa9.42□□□□□ -0.9
CDK9-204ENST00000491521 PHOX2AO14813 284 aa9.42□□□□□ -0.9
CDK9-204ENST00000491521 SUMO2P61956 95 aaKnown RBP9.42□□□□□ -0.9
CDK9-204ENST00000491521 C20orf78Q9BR46 151 aa9.42□□□□□ -0.9
CDK9-204ENST00000491521 IGHV3-38A0A0C4DH36 116 aa9.41□□□□□ -0.9
CDK9-204ENST00000491521 NBDYA0A0U1RRE5 68 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms