RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 C1QTNF4Q9BXJ3 329 aa10.01□□□□□ -0.81
SMPD4-219ENST00000491128 CFAP126Q5VTH2 177 aa10.01□□□□□ -0.81
SMPD4-219ENST00000491128 MORN3Q6PF18 240 aaPredicted RBP10.01□□□□□ -0.81
SMPD4-219ENST00000491128 TMEM263Q8WUH6 116 aaKnown RBP10.01□□□□□ -0.81
SMPD4-219ENST00000491128 GAGE12BA1L429 117 aa10□□□□□ -0.81
SMPD4-219ENST00000491128 GAGE7O76087 117 aa10□□□□□ -0.81
SMPD4-219ENST00000491128 GAGE12FP0CL80 117 aa10□□□□□ -0.81
SMPD4-219ENST00000491128 GAGE12GP0CL81 117 aa10□□□□□ -0.81
SMPD4-219ENST00000491128 GAGE12IP0CL82 117 aa10□□□□□ -0.81
SMPD4-219ENST00000491128 CHCHD1Q96BP2 118 aaKnown RBP10□□□□□ -0.81
SMPD4-219ENST00000491128 MRAP2Q96G30 205 aa10□□□□□ -0.81
SMPD4-219ENST00000491128 ZNF479Q96JC4 524 aa10□□□□□ -0.81
SMPD4-219ENST00000491128 C3orf79P0CE67 100 aa10□□□□□ -0.81
SMPD4-219ENST00000491128 SPATA12Q7Z6I5 190 aa10□□□□□ -0.81
SMPD4-219ENST00000491128 C18orf15Q96N68 181 aa10□□□□□ -0.81
SMPD4-219ENST00000491128 IGLV2-18A0A075B6J9 118 aa9.99□□□□□ -0.81
SMPD4-219ENST00000491128 SUMO2P61956 95 aaKnown RBP9.99□□□□□ -0.81
SMPD4-219ENST00000491128 LINC00467Q9BRT7 94 aa9.99□□□□□ -0.81
SMPD4-219ENST00000491128 M0QY20 66 aa9.99□□□□□ -0.81
SMPD4-219ENST00000491128 WIPF1O43516 503 aa9.99□□□□□ -0.81
SMPD4-219ENST00000491128 LEPROTL1O95214 131 aa9.99□□□□□ -0.81
SMPD4-219ENST00000491128 ATOH7Q8N100 152 aa9.99□□□□□ -0.81
SMPD4-219ENST00000491128 PMCHL2Q9BQD1 86 aa9.99□□□□□ -0.81
SMPD4-219ENST00000491128 PAM16Q9Y3D7 125 aa9.98□□□□□ -0.81
SMPD4-219ENST00000491128 DEFB130BP0DP73 79 aa9.98□□□□□ -0.81
SMPD4-219ENST00000491128 DEFB130AP0DP74 79 aa9.98□□□□□ -0.81
SMPD4-219ENST00000491128 BATFQ16520 125 aa9.98□□□□□ -0.81
SMPD4-219ENST00000491128 X6R8D5 127 aa9.98□□□□□ -0.81
SMPD4-219ENST00000491128 DNAH3Q8TD57 4116 aa9.98□□□□□ -0.81
SMPD4-219ENST00000491128 IL17DQ8TAD2 202 aa9.97□□□□□ -0.81
SMPD4-219ENST00000491128 COTL1Q14019 142 aa9.97□□□□□ -0.81
SMPD4-219ENST00000491128 UFSP1Q6NVU6 142 aa9.97□□□□□ -0.81
SMPD4-219ENST00000491128 Q8N8P6 123 aa9.97□□□□□ -0.81
SMPD4-219ENST00000491128 SPXQ9BT56 116 aa9.97□□□□□ -0.81
SMPD4-219ENST00000491128 SMIM2Q9BVW6 85 aa9.97□□□□□ -0.81
SMPD4-219ENST00000491128 RETNQ9HD89 108 aa9.97□□□□□ -0.81
SMPD4-219ENST00000491128 TRGV2A0A075B6R0 118 aa9.96□□□□□ -0.81
SMPD4-219ENST00000491128 SDHAF1A6NFY7 115 aa9.96□□□□□ -0.81
SMPD4-219ENST00000491128 OR4C5Q8NGB2 326 aa9.96□□□□□ -0.81
SMPD4-219ENST00000491128 C16orf74Q96GX8 76 aa9.96□□□□□ -0.81
SMPD4-219ENST00000491128 LAMTOR2Q9Y2Q5 125 aa9.96□□□□□ -0.81
SMPD4-219ENST00000491128 A8MWV9 139 aa9.96□□□□□ -0.82
SMPD4-219ENST00000491128 OR11H2Q8NH07 326 aa9.96□□□□□ -0.82
SMPD4-219ENST00000491128 ST20Q9HBF5 79 aa9.96□□□□□ -0.82
SMPD4-219ENST00000491128 TENM3Q9P273 2699 aa9.96□□□□□ -0.82
SMPD4-219ENST00000491128 TMEM70Q9BUB7 260 aa9.95□□□□□ -0.82
SMPD4-219ENST00000491128 NXT2Q9NPJ8 142 aaKnown RBP9.95□□□□□ -0.82
SMPD4-219ENST00000491128 DNHD1Q96M86 4753 aa9.95□□□□□ -0.82
SMPD4-219ENST00000491128 IGHV3-38A0A0C4DH36 116 aa9.95□□□□□ -0.82
SMPD4-219ENST00000491128 Q8N976 141 aa9.95□□□□□ -0.82
SMPD4-219ENST00000491128 VAMP8Q9BV40 100 aa9.95□□□□□ -0.82
SMPD4-219ENST00000491128 APOC4P55056 127 aa9.94□□□□□ -0.82
SMPD4-219ENST00000491128 MAJINQ3KP22 176 aa9.94□□□□□ -0.82
SMPD4-219ENST00000491128 COL5A1-AS1Q5SY13 56 aa9.94□□□□□ -0.82
SMPD4-219ENST00000491128 RS1O15537 224 aa9.93□□□□□ -0.82
SMPD4-219ENST00000491128 NUDT3O95989 172 aa9.93□□□□□ -0.82
SMPD4-219ENST00000491128 HBDP02042 147 aa9.93□□□□□ -0.82
SMPD4-219ENST00000491128 EGFEM1PQ0D2K5 195 aa9.93□□□□□ -0.82
SMPD4-219ENST00000491128 LAGE3Q14657 143 aa9.93□□□□□ -0.82
SMPD4-219ENST00000491128 PHLDA1Q8WV24 401 aaPredicted RBP9.93□□□□□ -0.82
SMPD4-219ENST00000491128 DAZ2Q13117 558 aaKnown RBP9.93□□□□□ -0.82
SMPD4-219ENST00000491128 POLR2KP53803 58 aaKnown RBP9.92□□□□□ -0.82
SMPD4-219ENST00000491128 C20orf78Q9BR46 151 aa9.92□□□□□ -0.82
SMPD4-219ENST00000491128 IGHV4-28A0A0C4DH34 117 aa9.92□□□□□ -0.82
SMPD4-219ENST00000491128 LOC100131303A0A0U1RQF7 123 aa9.92□□□□□ -0.82
SMPD4-219ENST00000491128 TCTAP57738 103 aa9.91□□□□□ -0.82
SMPD4-219ENST00000491128 RPL39P62891 51 aaKnown RBP9.91□□□□□ -0.82
SMPD4-219ENST00000491128 STPG4Q8N801 248 aa9.91□□□□□ -0.82
SMPD4-219ENST00000491128 SYS1-DBNDD2H3BUS1 97 aa9.91□□□□□ -0.82
SMPD4-219ENST00000491128 FCER1GP30273 86 aa9.91□□□□□ -0.82
SMPD4-219ENST00000491128 FAM222AQ5U5X8 452 aa9.91□□□□□ -0.82
SMPD4-219ENST00000491128 NEXN-AS1Q8NBZ9 246 aa9.91□□□□□ -0.82
SMPD4-219ENST00000491128 KIR2DL5BQ8NHK3 375 aa9.91□□□□□ -0.82
SMPD4-219ENST00000491128 PRSS47A8MTI9 375 aa9.9□□□□□ -0.82
SMPD4-219ENST00000491128 SAMD5Q5TGI4 173 aa9.9□□□□□ -0.82
SMPD4-219ENST00000491128 SLC25A29Q8N8R3 303 aa9.9□□□□□ -0.82
SMPD4-219ENST00000491128 RBX1P62877 108 aa9.9□□□□□ -0.82
SMPD4-219ENST00000491128 MAP1LC3CQ9BXW4 147 aa9.9□□□□□ -0.82
SMPD4-219ENST00000491128 CELA1Q9UNI1 258 aa9.9□□□□□ -0.82
SMPD4-219ENST00000491128 TNFRSF18Q9Y5U5 241 aa9.9□□□□□ -0.82
SMPD4-219ENST00000491128 CCL25O15444 150 aa9.89□□□□□ -0.83
SMPD4-219ENST00000491128 LGALS9BQ3B8N2 356 aa9.89□□□□□ -0.83
SMPD4-219ENST00000491128 ZNRF2Q8NHG8 242 aa9.89□□□□□ -0.83
SMPD4-219ENST00000491128 MRAPQ8TCY5 172 aa9.89□□□□□ -0.83
SMPD4-219ENST00000491128 OVOL2Q9BRP0 275 aa9.89□□□□□ -0.83
SMPD4-219ENST00000491128 HSPB8Q9UJY1 196 aa9.89□□□□□ -0.83
SMPD4-219ENST00000491128 LINC01546A6NGU7 62 aa9.89□□□□□ -0.83
SMPD4-219ENST00000491128 VCYO14598 125 aa9.89□□□□□ -0.83
SMPD4-219ENST00000491128 ZC2HC1BQ5TFG8 222 aa9.89□□□□□ -0.83
SMPD4-219ENST00000491128 TRAV4A0A0B4J268 109 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 GAGE12JA6NER3 117 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 GAGE4Q13068 117 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 GAGE5Q13069 117 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 GAGE13Q4V321 117 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 SPATA45Q537H7 98 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 ZFP2Q6ZN57 461 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 PTH2Q96A98 100 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 IFI27L1Q96BM0 104 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 KIR2DL4Q99706 377 aa9.88□□□□□ -0.83
SMPD4-219ENST00000491128 PPP1R17O96001 155 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms