RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 NUDT3O95989 172 aa7.45□□□□□ -1.22
HDAC3-210ENST00000490808 GATA1P15976 413 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-210ENST00000490808 KRTAP10-11P60412 298 aa7.45□□□□□ -1.22
HDAC3-210ENST00000490808 SUMO4Q6EEV6 95 aa7.45□□□□□ -1.22
HDAC3-210ENST00000490808 ZFP2Q6ZN57 461 aa7.45□□□□□ -1.22
HDAC3-210ENST00000490808 KIR2DL5AQ8N109 375 aa7.45□□□□□ -1.22
HDAC3-210ENST00000490808 C1orf158Q8N1D5 194 aa7.45□□□□□ -1.22
HDAC3-210ENST00000490808 C11orf72Q8NBR9 251 aa7.45□□□□□ -1.22
HDAC3-210ENST00000490808 KIR2DL5BQ8NHK3 375 aa7.45□□□□□ -1.22
HDAC3-210ENST00000490808 IFI27L1Q96BM0 104 aa7.45□□□□□ -1.22
HDAC3-210ENST00000490808 DNAH9Q9NYC9 4486 aa7.44□□□□□ -1.22
HDAC3-210ENST00000490808 STAB2Q8WWQ8 2551 aa7.44□□□□□ -1.22
HDAC3-210ENST00000490808 IGLV2-18A0A075B6J9 118 aa7.44□□□□□ -1.22
HDAC3-210ENST00000490808 SPRY2O43597 315 aa7.44□□□□□ -1.22
HDAC3-210ENST00000490808 AZU1P20160 251 aa7.44□□□□□ -1.22
HDAC3-210ENST00000490808 LINC00315P59091 139 aa7.44□□□□□ -1.22
HDAC3-210ENST00000490808 MRAPQ8TCY5 172 aa7.44□□□□□ -1.22
HDAC3-210ENST00000490808 DNAJC30Q96LL9 226 aa7.44□□□□□ -1.22
HDAC3-210ENST00000490808 JPT2Q9H910 190 aa7.44□□□□□ -1.22
HDAC3-210ENST00000490808 TNFRSF18Q9Y5U5 241 aa7.44□□□□□ -1.22
HDAC3-210ENST00000490808 COL7A1Q02388 2944 aa7.44□□□□□ -1.22
HDAC3-210ENST00000490808 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-210ENST00000490808 RS1O15537 224 aa7.43□□□□□ -1.22
HDAC3-210ENST00000490808 DAZ2Q13117 558 aaKnown RBP7.43□□□□□ -1.22
HDAC3-210ENST00000490808 LGALS9CQ6DKI2 356 aa7.43□□□□□ -1.22
HDAC3-210ENST00000490808 ZNF705AQ6ZN79 300 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-210ENST00000490808 OR4C5Q8NGB2 326 aa7.43□□□□□ -1.22
HDAC3-210ENST00000490808 RNASE8Q8TDE3 154 aaKnown RBP7.43□□□□□ -1.22
HDAC3-210ENST00000490808 TRAV9-2A0A087WT02 112 aa7.42□□□□□ -1.22
HDAC3-210ENST00000490808 TRGV1A0A0A0MS02 117 aa7.42□□□□□ -1.22
HDAC3-210ENST00000490808 TRAV4A0A0B4J268 109 aa7.42□□□□□ -1.22
HDAC3-210ENST00000490808 TRBV27A0A0K0K1C4 114 aa7.42□□□□□ -1.22
HDAC3-210ENST00000490808 SDHAF1A6NFY7 115 aa7.42□□□□□ -1.22
HDAC3-210ENST00000490808 M0QY20 66 aa7.42□□□□□ -1.22
HDAC3-210ENST00000490808 PRSS1P07477 247 aa7.42□□□□□ -1.22
HDAC3-210ENST00000490808 POLR2KP53803 58 aaKnown RBP7.42□□□□□ -1.22
HDAC3-210ENST00000490808 RHOHQ15669 191 aa7.42□□□□□ -1.22
HDAC3-210ENST00000490808 LCE2DQ5TA82 110 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-210ENST00000490808 CFAP126Q5VTH2 177 aa7.42□□□□□ -1.22
HDAC3-210ENST00000490808 Q6ZN92 141 aa7.42□□□□□ -1.22
HDAC3-210ENST00000490808 ZNF664Q8N3J9 261 aa7.42□□□□□ -1.22
HDAC3-210ENST00000490808 RPL39LQ96EH5 51 aaKnown RBP7.42□□□□□ -1.22
HDAC3-210ENST00000490808 H0Y8G0 127 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 I3L3M4 83 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 K7EIL1 84 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 GAS8-AS1O95177 125 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 NHLRC4P0CG21 123 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-210ENST00000490808 LINC01545Q5VT33 79 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 CSNK1G2-AS1Q8NCQ2 148 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 IL17DQ8TAD2 202 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 TOMM6Q96B49 74 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 SCGB3A1Q96QR1 104 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 B9D2Q9BPU9 175 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 OVOL2Q9BRP0 275 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 WFDC10AQ9H1F0 79 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 MRPL16Q9NX20 251 aaKnown RBP7.41□□□□□ -1.22
HDAC3-210ENST00000490808 CYSLTR1Q9Y271 337 aa7.41□□□□□ -1.22
HDAC3-210ENST00000490808 A0A096LNJ9 63 aa7.4□□□□□ -1.22
HDAC3-210ENST00000490808 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.22
HDAC3-210ENST00000490808 PRB2P02812 416 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-210ENST00000490808 SMAGPQ0VAQ4 97 aa7.4□□□□□ -1.22
HDAC3-210ENST00000490808 SPATA45Q537H7 98 aa7.4□□□□□ -1.22
HDAC3-210ENST00000490808 PAPPA-AS1Q5QFB9 102 aa7.4□□□□□ -1.22
HDAC3-210ENST00000490808 C2orf66Q6UXQ4 117 aa7.4□□□□□ -1.22
HDAC3-210ENST00000490808 PAM16Q9Y3D7 125 aa7.4□□□□□ -1.22
HDAC3-210ENST00000490808 TRGV2A0A075B6R0 118 aa7.39□□□□□ -1.23
HDAC3-210ENST00000490808 GIG44P09565 113 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-210ENST00000490808 DDTP30046 118 aa7.39□□□□□ -1.23
HDAC3-210ENST00000490808 DEFB121Q5J5C9 76 aa7.39□□□□□ -1.23
HDAC3-210ENST00000490808 UFSP1Q6NVU6 142 aa7.39□□□□□ -1.23
HDAC3-210ENST00000490808 CDPF1Q6NVV7 123 aa7.39□□□□□ -1.23
HDAC3-210ENST00000490808 ERASQ7Z444 233 aa7.39□□□□□ -1.23
HDAC3-210ENST00000490808 Q8N976 141 aa7.39□□□□□ -1.23
HDAC3-210ENST00000490808 TMEM141Q96I45 108 aa7.39□□□□□ -1.23
HDAC3-210ENST00000490808 PRO1933Q9H354 126 aa7.39□□□□□ -1.23
HDAC3-210ENST00000490808 NOP10Q9NPE3 64 aaKnown RBP7.39□□□□□ -1.23
HDAC3-210ENST00000490808 IGHV4-30-4P0DP06 118 aa7.38□□□□□ -1.23
HDAC3-210ENST00000490808 RPL36AP83881 106 aaKnown RBP7.38□□□□□ -1.23
HDAC3-210ENST00000490808 LINC00173Q6ZV60 143 aa7.38□□□□□ -1.23
HDAC3-210ENST00000490808 RPL36ALQ969Q0 106 aaKnown RBP7.38□□□□□ -1.23
HDAC3-210ENST00000490808 C18orf15Q96N68 181 aa7.38□□□□□ -1.23
HDAC3-210ENST00000490808 IGHV3-73A0A0B4J1V6 119 aa7.37□□□□□ -1.23
HDAC3-210ENST00000490808 TRAV12-1A0A0B4J245 112 aa7.37□□□□□ -1.23
HDAC3-210ENST00000490808 NPSP0C0P6 89 aa7.37□□□□□ -1.23
HDAC3-210ENST00000490808 LBHQ53QV2 105 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-210ENST00000490808 LINC00469Q8N7U9 141 aa7.37□□□□□ -1.23
HDAC3-210ENST00000490808 TIMM17AQ99595 171 aa7.37□□□□□ -1.23
HDAC3-210ENST00000490808 PMCHL2Q9BQD1 86 aa7.37□□□□□ -1.23
HDAC3-210ENST00000490808 MIEN1Q9BRT3 115 aa7.37□□□□□ -1.23
HDAC3-210ENST00000490808 UQCR10Q9UDW1 63 aa7.37□□□□□ -1.23
HDAC3-210ENST00000490808 TRGV4A0A0C4DH28 118 aa7.36□□□□□ -1.23
HDAC3-210ENST00000490808 LYRM9A8MSI8 78 aa7.36□□□□□ -1.23
HDAC3-210ENST00000490808 K7EQD1 137 aa7.36□□□□□ -1.23
HDAC3-210ENST00000490808 DPM2O94777 84 aa7.36□□□□□ -1.23
HDAC3-210ENST00000490808 IGKCP01834 107 aa7.36□□□□□ -1.23
HDAC3-210ENST00000490808 PRM2P04554 102 aa7.36□□□□□ -1.23
HDAC3-210ENST00000490808 MIFP14174 115 aa7.36□□□□□ -1.23
HDAC3-210ENST00000490808 PLNP26678 52 aa7.36□□□□□ -1.23
HDAC3-210ENST00000490808 COTL1Q14019 142 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms