RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 A0A1W2PNN7 141 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 A0A1W2PQD3 144 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 TCRBV4S1A1TA0A5B7 111 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 MYBPHLA2RUH7 354 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 PGPA6NDG6 321 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 HIGD1CA8MV81 97 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 JMJD7-PLA2G4BH0Y9G9 81 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 H0YGX0 51 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 J3QKU1 62 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 M0R1B8 84 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 M0R3E3 92 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 CCL22O00626 93 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 SPINK4O60575 86 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 IGHMP01871 453 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 PIRTP0C851 137 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 ARL14EPLP0DKL9 152 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 SLC25A16P16260 332 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 SSR4P51571 173 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 GFERP55789 205 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 SYNJ2BPP57105 145 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 RPL18Q07020 188 aaKnown RBP1.36□□□□□ -2.19
HMGN1-218ENST00000490032 RBMY1FQ15415 496 aaKnown RBP1.36□□□□□ -2.19
HMGN1-218ENST00000490032 CENPWQ5EE01 88 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 CFAP126Q5VTH2 177 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 C10orf113Q5VZT2 155 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 EBLN2Q6P2I7 272 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 TMEM14EPQ6UXP3 125 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 AAED1Q7RTV5 226 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 PFN4Q8NHR9 129 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 PRUNE2Q8WUY3 3088 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 KLK6Q92876 244 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 TMEM230Q96A57 120 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 CARD19Q96LW7 228 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 ZNF714Q96N38 554 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 PRSS27Q9BQR3 290 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 TMEM243Q9BU79 118 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 UBL5Q9BZL1 73 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 CDH23Q9H251 3354 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 OTORQ9NRC9 128 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 C21orf62Q9NYP8 219 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 ZNF492Q9P255 531 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 LINC00312Q9Y6C7 94 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 KCNE3Q9Y6H6 103 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 V9GYV3 84 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 ZFYVE26Q68DK2 2539 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 CNOT1A5YKK6 2376 aaKnown RBP1.36□□□□□ -2.19
HMGN1-218ENST00000490032 NCOA6Q14686 2063 aaPredicted RBP1.36□□□□□ -2.19
HMGN1-218ENST00000490032 TMEM131Q92545 1883 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 LCTP09848 1927 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 ATG2AQ2TAZ0 1938 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 GREB1Q4ZG55 1949 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 TRGV5A0A0B4J1U4 118 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 TRAV12-1A0A0B4J245 112 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 IGHV1-58A0A0C4DH39 117 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 A0A0J9YW62 118 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 TRBV6-1A0A0K0K1D8 114 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 TRBV10-3A0A0K0K1G6 114 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 A0A1B0GW54 56 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 F8VRH5 84 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 J3QLI3 93 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 K7EQS6 105 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 NUPR1O60356 82 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 NDUFB1O75438 58 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 IGLV3-27P01718 113 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 MT-ATP8P03928 68 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 CD7P09564 240 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 PFN2P35080 140 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 FGF12P61328 243 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 QRFPP83859 136 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 RBM3P98179 157 aaKnown RBP1.35□□□□□ -2.19
HMGN1-218ENST00000490032 RPL18AQ02543 176 aaKnown RBP1.35□□□□□ -2.19
HMGN1-218ENST00000490032 FAM53BQ14153 422 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 C10orf128Q5T292 105 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 FAM104BQ5XKR9 115 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 SFTA2Q6UW10 78 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 SBSPONQ8IVN8 264 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 DAND5Q8N907 189 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 C1orf64Q8NEQ6 169 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 BRK1Q8WUW1 75 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 TMEM141Q96I45 108 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 LINC01600Q96MT4 127 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 NABP2Q9BQ15 211 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 C20orf78Q9BR46 151 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 TIMM21Q9BVV7 248 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 RNASE7Q9H1E1 156 aaKnown RBP1.35□□□□□ -2.19
HMGN1-218ENST00000490032 TP73-AS1Q9UF72 201 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 LINC00527Q9UJ94 153 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 PKIGQ9Y2B9 76 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 NAV2Q8IVL1 2488 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 NUP210LQ5VU65 1888 aa1.35□□□□□ -2.19
HMGN1-218ENST00000490032 KIAA2026Q5HYC2 2103 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 EML6Q6ZMW3 1958 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 SPTA1P02549 2419 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 TRAV26-2A0A0B4J265 109 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 IGHV1-69DA0A0B4J2H0 117 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 A0A0D9SEW6 157 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 LOC389332A0A1B0GUA5 103 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 FAM236AA0A1B0GUQ0 79 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 FAM236BA0A1B0GV22 79 aa1.34□□□□□ -2.19
HMGN1-218ENST00000490032 TMEM30CPA0ZSE6 113 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms