RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 MT-ND6P03923 174 aa7.57□□□□□ -1.2
TFF3-203ENST00000489676 RPS10P46783 165 aaKnown RBP7.57□□□□□ -1.2
TFF3-203ENST00000489676 COX19Q49B96 90 aa7.57□□□□□ -1.2
TFF3-203ENST00000489676 CASC10Q5T4H9 136 aa7.57□□□□□ -1.2
TFF3-203ENST00000489676 NRACQ8N912 160 aa7.57□□□□□ -1.2
TFF3-203ENST00000489676 C15orf53Q8NAA6 179 aa7.57□□□□□ -1.2
TFF3-203ENST00000489676 PRADC1Q9BSG0 188 aa7.57□□□□□ -1.2
TFF3-203ENST00000489676 APLNQ9ULZ1 77 aa7.57□□□□□ -1.2
TFF3-203ENST00000489676 KLK5Q9Y337 293 aaPredicted RBP7.57□□□□□ -1.2
TFF3-203ENST00000489676 LYSTQ99698 3801 aa7.57□□□□□ -1.2
TFF3-203ENST00000489676 COLCA2A8K830 154 aa7.56□□□□□ -1.2
TFF3-203ENST00000489676 SMKR1H3BMG3 65 aa7.56□□□□□ -1.2
TFF3-203ENST00000489676 H7C1H1 209 aa7.56□□□□□ -1.2
TFF3-203ENST00000489676 NCR2O95944 276 aa7.56□□□□□ -1.2
TFF3-203ENST00000489676 RPL39LQ96EH5 51 aaKnown RBP7.56□□□□□ -1.2
TFF3-203ENST00000489676 ICOSQ9Y6W8 199 aa7.56□□□□□ -1.2
TFF3-203ENST00000489676 TRBV6-5A0A0K0K1A5 114 aa7.55□□□□□ -1.2
TFF3-203ENST00000489676 GAGE12JA6NER3 117 aa7.55□□□□□ -1.2
TFF3-203ENST00000489676 D6R8Y8 96 aa7.55□□□□□ -1.2
TFF3-203ENST00000489676 TCTAP57738 103 aa7.55□□□□□ -1.2
TFF3-203ENST00000489676 UBE2D3P61077 147 aa7.55□□□□□ -1.2
TFF3-203ENST00000489676 UBE2D2P62837 147 aa7.55□□□□□ -1.2
TFF3-203ENST00000489676 GAGE1Q13065 139 aa7.55□□□□□ -1.2
TFF3-203ENST00000489676 GAGE4Q13068 117 aa7.55□□□□□ -1.2
TFF3-203ENST00000489676 GAGE5Q13069 117 aa7.55□□□□□ -1.2
TFF3-203ENST00000489676 GAGE13Q4V321 117 aa7.55□□□□□ -1.2
TFF3-203ENST00000489676 NIT2Q9NQR4 276 aa7.55□□□□□ -1.2
TFF3-203ENST00000489676 TRBV7-3A0A075B6L6 115 aa7.54□□□□□ -1.2
TFF3-203ENST00000489676 PPBPP02775 128 aa7.54□□□□□ -1.2
TFF3-203ENST00000489676 RPL36AP83881 106 aaKnown RBP7.54□□□□□ -1.2
TFF3-203ENST00000489676 MRPL23Q16540 153 aaKnown RBP7.54□□□□□ -1.2
TFF3-203ENST00000489676 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.54□□□□□ -1.2
TFF3-203ENST00000489676 ZNRF2Q8NHG8 242 aa7.54□□□□□ -1.2
TFF3-203ENST00000489676 RPL36ALQ969Q0 106 aaKnown RBP7.54□□□□□ -1.2
TFF3-203ENST00000489676 DNAJC30Q96LL9 226 aa7.54□□□□□ -1.2
TFF3-203ENST00000489676 MRPL18Q9H0U6 180 aaKnown RBP7.54□□□□□ -1.2
TFF3-203ENST00000489676 DNAH1Q9P2D7 4330 aa7.54□□□□□ -1.2
TFF3-203ENST00000489676 VPS13DQ5THJ4 4388 aa7.53□□□□□ -1.2
TFF3-203ENST00000489676 NUDT3O95989 172 aa7.53□□□□□ -1.2
TFF3-203ENST00000489676 NPYP01303 97 aa7.53□□□□□ -1.2
TFF3-203ENST00000489676 APCSP02743 223 aa7.53□□□□□ -1.2
TFF3-203ENST00000489676 SRIP30626 198 aa7.53□□□□□ -1.2
TFF3-203ENST00000489676 CKS2P33552 79 aa7.53□□□□□ -1.2
TFF3-203ENST00000489676 OR10J3Q5JRS4 329 aa7.53□□□□□ -1.2
TFF3-203ENST00000489676 ORMDL3Q8N138 153 aa7.53□□□□□ -1.2
TFF3-203ENST00000489676 PHOX2AO14813 284 aa7.52□□□□□ -1.21
TFF3-203ENST00000489676 TNFRSF6BO95407 300 aa7.52□□□□□ -1.21
TFF3-203ENST00000489676 RAB5AP20339 215 aa7.52□□□□□ -1.21
TFF3-203ENST00000489676 POLR2KP53803 58 aaKnown RBP7.52□□□□□ -1.21
TFF3-203ENST00000489676 TIRAPP58753 221 aa7.52□□□□□ -1.21
TFF3-203ENST00000489676 KIAA1644Q3SXP7 199 aa7.52□□□□□ -1.21
TFF3-203ENST00000489676 NEGR1Q7Z3B1 354 aa7.52□□□□□ -1.21
TFF3-203ENST00000489676 SH2D6Q7Z4S9 175 aa7.52□□□□□ -1.21
TFF3-203ENST00000489676 ATP6V0E2Q8NHE4 81 aa7.52□□□□□ -1.21
TFF3-203ENST00000489676 PRELID3AQ96N28 172 aa7.52□□□□□ -1.21
TFF3-203ENST00000489676 TMEM70Q9BUB7 260 aa7.52□□□□□ -1.21
TFF3-203ENST00000489676 TRAPPC1Q9Y5R8 145 aa7.52□□□□□ -1.21
TFF3-203ENST00000489676 SDHAF1A6NFY7 115 aa7.51□□□□□ -1.21
TFF3-203ENST00000489676 C1orf196B1AJZ1 125 aa7.51□□□□□ -1.21
TFF3-203ENST00000489676 PPP1R17O96001 155 aa7.51□□□□□ -1.21
TFF3-203ENST00000489676 RAB5BP61020 215 aa7.51□□□□□ -1.21
TFF3-203ENST00000489676 SUMO2P61956 95 aaKnown RBP7.51□□□□□ -1.21
TFF3-203ENST00000489676 RPL32P62910 135 aaKnown RBP7.51□□□□□ -1.21
TFF3-203ENST00000489676 C20orf78Q9BR46 151 aa7.51□□□□□ -1.21
TFF3-203ENST00000489676 ALKBH7Q9BT30 221 aaPredicted RBP7.51□□□□□ -1.21
TFF3-203ENST00000489676 LAMTOR2Q9Y2Q5 125 aa7.51□□□□□ -1.21
TFF3-203ENST00000489676 TMA7Q9Y2S6 64 aaKnown RBP7.51□□□□□ -1.21
TFF3-203ENST00000489676 TNFRSF18Q9Y5U5 241 aa7.51□□□□□ -1.21
TFF3-203ENST00000489676 ALMS1Q8TCU4 4167 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 IGLV2-18A0A075B6J9 118 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 IGHV3-38A0A0C4DH36 116 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 TRBV27A0A0K0K1C4 114 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 PRSS47A8MTI9 375 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 FABP9Q0Z7S8 132 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 ESRGQ1W209 222 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 LYPD5Q6UWN5 251 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 NTM-AS1Q6ZSK4 140 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 DAZ4Q86SG3 579 aaKnown RBP7.5□□□□□ -1.21
TFF3-203ENST00000489676 SMIM2Q9BVW6 85 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 GTSF1LQ9H1H1 148 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 ST20Q9HBF5 79 aa7.5□□□□□ -1.21
TFF3-203ENST00000489676 DAZ3Q9NR90 486 aaKnown RBP7.5□□□□□ -1.21
TFF3-203ENST00000489676 SACSQ9NZJ4 4579 aa7.49□□□□□ -1.21
TFF3-203ENST00000489676 LINC00588Q9Y4M8 146 aa7.49□□□□□ -1.21
TFF3-203ENST00000489676 TSHBP01222 138 aa7.48□□□□□ -1.21
TFF3-203ENST00000489676 TRGC2P03986 189 aa7.48□□□□□ -1.21
TFF3-203ENST00000489676 UPK3BQ9BT76 320 aa7.48□□□□□ -1.21
TFF3-203ENST00000489676 MRPS16Q9Y3D3 137 aaKnown RBP7.48□□□□□ -1.21
TFF3-203ENST00000489676 EPPK1P58107 5090 aaKnown RBP7.48□□□□□ -1.21
TFF3-203ENST00000489676 BIRC6Q9NR09 4857 aa7.48□□□□□ -1.21
TFF3-203ENST00000489676 TRBV6-8A0A0A6YYG3 113 aa7.47□□□□□ -1.21
TFF3-203ENST00000489676 S100A6P06703 90 aa7.47□□□□□ -1.21
TFF3-203ENST00000489676 IQCJQ1A5X6 159 aa7.47□□□□□ -1.21
TFF3-203ENST00000489676 LELP1Q5T871 98 aa7.47□□□□□ -1.21
TFF3-203ENST00000489676 LINC00476Q8WZB0 136 aa7.47□□□□□ -1.21
TFF3-203ENST00000489676 I3L3M4 83 aa7.46□□□□□ -1.22
TFF3-203ENST00000489676 VCYO14598 125 aa7.46□□□□□ -1.22
TFF3-203ENST00000489676 CCL18P55774 89 aa7.46□□□□□ -1.22
TFF3-203ENST00000489676 COTL1Q14019 142 aa7.46□□□□□ -1.22
TFF3-203ENST00000489676 TMEM97Q5BJF2 176 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms